RNA–Protein interactions for RNA: ENST00000450295.5

SEMA4D-212, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-212ENST00000450295 FHAD1B1AJZ9 1412 aa17.52■□□□□ 0.4
SEMA4D-212ENST00000450295 CUX2O14529 1486 aa17.51■□□□□ 0.39
SEMA4D-212ENST00000450295 IRX6P78412 446 aaPredicted RBP17.5■□□□□ 0.39
SEMA4D-212ENST00000450295 CARMIL1Q5VZK9 1371 aa17.5■□□□□ 0.39
SEMA4D-212ENST00000450295 SMARCA4P51532 1647 aa17.49■□□□□ 0.39
SEMA4D-212ENST00000450295 ATAD2BQ9ULI0 1458 aa17.48■□□□□ 0.39
SEMA4D-212ENST00000450295 WIZO95785 1651 aa17.45■□□□□ 0.38
SEMA4D-212ENST00000450295 CADPSQ9ULU8 1353 aa17.45■□□□□ 0.38
SEMA4D-212ENST00000450295 CCDC136Q96JN2 1154 aa17.44■□□□□ 0.38
SEMA4D-212ENST00000450295 CHIC2Q9UKJ5 165 aa17.43■□□□□ 0.38
SEMA4D-212ENST00000450295 SALL2Q9Y467 1007 aaPredicted RBP17.43■□□□□ 0.38
SEMA4D-212ENST00000450295 ANP32EQ9BTT0 268 aa17.42■□□□□ 0.38
SEMA4D-212ENST00000450295 NEFMP07197 916 aa17.41■□□□□ 0.38
SEMA4D-212ENST00000450295 SOGA1O94964 1423 aa17.4■□□□□ 0.38
SEMA4D-212ENST00000450295 STAG3Q9UJ98 1225 aa17.39■□□□□ 0.37
SEMA4D-212ENST00000450295 ANP32BQ92688 251 aaKnown RBP17.39■□□□□ 0.37
SEMA4D-212ENST00000450295 ARXQ96QS3 562 aa17.38■□□□□ 0.37
SEMA4D-212ENST00000450295 HIRIP3Q9BW71 556 aaPredicted RBP17.37■□□□□ 0.37
SEMA4D-212ENST00000450295 GLIPR1L2Q4G1C9 344 aa17.37■□□□□ 0.37
SEMA4D-212ENST00000450295 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
SEMA4D-212ENST00000450295 CFDP1Q9UEE9 299 aaPredicted RBP17.35■□□□□ 0.37
SEMA4D-212ENST00000450295 HSP90AA1P07900 732 aaKnown RBP17.34■□□□□ 0.37
SEMA4D-212ENST00000450295 CHGAP10645 457 aaKnown RBP17.33■□□□□ 0.37
SEMA4D-212ENST00000450295 UPF2Q9HAU5 1272 aaKnown RBP17.33■□□□□ 0.37
SEMA4D-212ENST00000450295 ABCC8Q09428 1581 aa17.33■□□□□ 0.36
SEMA4D-212ENST00000450295 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.32■□□□□ 0.36
SEMA4D-212ENST00000450295 MRS2Q9HD23 443 aa17.32■□□□□ 0.36
SEMA4D-212ENST00000450295 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
SEMA4D-212ENST00000450295 CARMIL2Q6F5E8 1435 aa17.29■□□□□ 0.36
SEMA4D-212ENST00000450295 TMC1Q8TDI8 760 aa17.28■□□□□ 0.36
SEMA4D-212ENST00000450295 KCNH8Q96L42 1107 aa17.28■□□□□ 0.36
SEMA4D-212ENST00000450295 EIF4G1Q04637 1599 aaKnown RBP17.27■□□□□ 0.35
SEMA4D-212ENST00000450295 RRP7BPQ9NSQ0 103 aa17.26■□□□□ 0.35
SEMA4D-212ENST00000450295 CCNB3Q8WWL7 1395 aa17.25■□□□□ 0.35
SEMA4D-212ENST00000450295 FMN1Q68DA7 1419 aa17.25■□□□□ 0.35
SEMA4D-212ENST00000450295 NCAPD3P42695 1498 aa17.21■□□□□ 0.35
SEMA4D-212ENST00000450295 RAPGEF2Q9Y4G8 1499 aa17.2■□□□□ 0.34
SEMA4D-212ENST00000450295 EIF4G2P78344 907 aaKnown RBP eCLIP17.2■□□□□ 0.34
SEMA4D-212ENST00000450295 SUPT16HQ9Y5B9 1047 aaKnown RBP17.19■□□□□ 0.34
SEMA4D-212ENST00000450295 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.18■□□□□ 0.34
SEMA4D-212ENST00000450295 TDRD9Q8NDG6 1382 aaKnown RBP17.18■□□□□ 0.34
SEMA4D-212ENST00000450295 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
SEMA4D-212ENST00000450295 TIMELESSQ9UNS1 1208 aa17.14■□□□□ 0.34
SEMA4D-212ENST00000450295 ARHGAP35Q9NRY4 1499 aa17.14■□□□□ 0.33
SEMA4D-212ENST00000450295 WDR43Q15061 677 aaKnown RBP eCLIP17.14■□□□□ 0.33
SEMA4D-212ENST00000450295 DDRGK1Q96HY6 314 aa17.14■□□□□ 0.33
SEMA4D-212ENST00000450295 KDM2AQ9Y2K7 1162 aa17.12■□□□□ 0.33
SEMA4D-212ENST00000450295 SENP3-EIF4A1A0A087X0R7 540 aa17.12■□□□□ 0.33
SEMA4D-212ENST00000450295 RTN4Q9NQC3 1192 aaKnown RBP17.11■□□□□ 0.33
SEMA4D-212ENST00000450295 CDCA8Q53HL2 280 aa17.1■□□□□ 0.33
SEMA4D-212ENST00000450295 LAS1LQ9Y4W2 734 aaKnown RBP17.05■□□□□ 0.32
SEMA4D-212ENST00000450295 KANK1Q14678 1352 aa17.04■□□□□ 0.32
SEMA4D-212ENST00000450295 NOP58Q9Y2X3 529 aaKnown RBP17.04■□□□□ 0.32
SEMA4D-212ENST00000450295 PPP1R15AO75807 674 aaPredicted RBP17.03■□□□□ 0.32
SEMA4D-212ENST00000450295 BECN1Q14457 450 aa17.02■□□□□ 0.32
SEMA4D-212ENST00000450295 SETD5Q9C0A6 1442 aa17.02■□□□□ 0.32
SEMA4D-212ENST00000450295 PPP4R2Q9NY27 417 aa17■□□□□ 0.31
SEMA4D-212ENST00000450295 TRIM44Q96DX7 344 aaPredicted RBP16.99■□□□□ 0.31
SEMA4D-212ENST00000450295 RSPH4AQ5TD94 716 aa16.97■□□□□ 0.31
SEMA4D-212ENST00000450295 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.31
SEMA4D-212ENST00000450295 HMGXB3Q12766 1538 aa16.96■□□□□ 0.31
SEMA4D-212ENST00000450295 EFCAB2Q5VUJ9 269 aa16.96■□□□□ 0.31
SEMA4D-212ENST00000450295 PPM1GO15355 546 aaPredicted RBP16.96■□□□□ 0.31
SEMA4D-212ENST00000450295 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
SEMA4D-212ENST00000450295 RGL3Q3MIN7 710 aa16.94■□□□□ 0.3
SEMA4D-212ENST00000450295 FGD5Q6ZNL6 1462 aa16.94■□□□□ 0.3
SEMA4D-212ENST00000450295 CARD11Q9BXL7 1154 aa16.94■□□□□ 0.3
SEMA4D-212ENST00000450295 ARID4BQ4LE39 1312 aaPredicted RBP16.93■□□□□ 0.3
SEMA4D-212ENST00000450295 DEKP35659 375 aaKnown RBP16.93■□□□□ 0.3
SEMA4D-212ENST00000450295 B4GALNT3Q6L9W6 998 aa16.93■□□□□ 0.3
SEMA4D-212ENST00000450295 KANK4Q5T7N3 995 aaPredicted RBP16.92■□□□□ 0.3
SEMA4D-212ENST00000450295 ANKRD30AQ9BXX3 1397 aa16.92■□□□□ 0.3
SEMA4D-212ENST00000450295 JPH4Q96JJ6 628 aa16.92■□□□□ 0.3
SEMA4D-212ENST00000450295 SIN3AQ96ST3 1273 aa16.92■□□□□ 0.3
SEMA4D-212ENST00000450295 RBM19Q9Y4C8 960 aaKnown RBP16.92■□□□□ 0.3
SEMA4D-212ENST00000450295 FHOD3Q2V2M9 1422 aa16.91■□□□□ 0.3
SEMA4D-212ENST00000450295 GAPVD1Q14C86 1478 aa16.91■□□□□ 0.3
SEMA4D-212ENST00000450295 CFTRP13569 1480 aa16.9■□□□□ 0.3
SEMA4D-212ENST00000450295 NAP1L5Q96NT1 182 aaPredicted RBP16.9■□□□□ 0.3
SEMA4D-212ENST00000450295 HDGFP51858 240 aaKnown RBP16.88■□□□□ 0.29
SEMA4D-212ENST00000450295 MYH16Q9H6N6 1097 aa16.88■□□□□ 0.29
SEMA4D-212ENST00000450295 NCLP19338 710 aaKnown RBP16.87■□□□□ 0.29
SEMA4D-212ENST00000450295 IGF1RP08069 1367 aa16.87■□□□□ 0.29
SEMA4D-212ENST00000450295 CFAP53Q96M91 514 aa16.87■□□□□ 0.29
SEMA4D-212ENST00000450295 KNSTRNQ9Y448 316 aa16.86■□□□□ 0.29
SEMA4D-212ENST00000450295 ERICH6BQ5W0A0 696 aa16.85■□□□□ 0.29
SEMA4D-212ENST00000450295 GOLGA6L22H0YM25 854 aa16.84■□□□□ 0.29
SEMA4D-212ENST00000450295 RUSC2Q8N2Y8 1516 aa16.83■□□□□ 0.28
SEMA4D-212ENST00000450295 RGS3P49796 1198 aa16.82■□□□□ 0.28
SEMA4D-212ENST00000450295 RAB3GAP2Q9H2M9 1393 aa16.8■□□□□ 0.28
SEMA4D-212ENST00000450295 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
SEMA4D-212ENST00000450295 PTPRGP23470 1445 aa16.8■□□□□ 0.28
SEMA4D-212ENST00000450295 PTMAP06454 111 aaKnown RBP16.78■□□□□ 0.28
SEMA4D-212ENST00000450295 TMF1P82094 1093 aa16.78■□□□□ 0.28
SEMA4D-212ENST00000450295 PKD2Q13563 968 aa16.78■□□□□ 0.28
SEMA4D-212ENST00000450295 ERICH3Q5RHP9 1530 aa16.78■□□□□ 0.28
SEMA4D-212ENST00000450295 TPRNQ4KMQ1 711 aa16.77■□□□□ 0.27
SEMA4D-212ENST00000450295 POGKQ9P215 609 aa16.76■□□□□ 0.27
SEMA4D-212ENST00000450295 DCAF11Q8TEB1 546 aa16.76■□□□□ 0.27
SEMA4D-212ENST00000450295 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms