RNA–Protein interactions for RNA: ENST00000450295.5

SEMA4D-212, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-212ENST00000450295 NISCHQ9Y2I1 1504 aa23.09■■□□□ 1.29
SEMA4D-212ENST00000450295 DCAF8L2P0C7V8 631 aa22.3■■□□□ 1.16
SEMA4D-212ENST00000450295 SUPT5HO00267 1087 aaKnown RBP21.13■□□□□ 0.97
SEMA4D-212ENST00000450295 SHROOM4Q9ULL8 1493 aa20.97■□□□□ 0.95
SEMA4D-212ENST00000450295 EHMT2Q96KQ7 1210 aa20.56■□□□□ 0.88
SEMA4D-212ENST00000450295 PELP1Q8IZL8 1130 aaKnown RBP20.39■□□□□ 0.85
SEMA4D-212ENST00000450295 PCGF6Q9BYE7 350 aa20.26■□□□□ 0.83
SEMA4D-212ENST00000450295 APLP2Q06481 763 aa19.97■□□□□ 0.79
SEMA4D-212ENST00000450295 TTBK1Q5TCY1 1321 aaPredicted RBP19.95■□□□□ 0.78
SEMA4D-212ENST00000450295 FAM9AQ8IZU1 332 aaPredicted RBP19.94■□□□□ 0.78
SEMA4D-212ENST00000450295 CENPBP07199 599 aaPredicted RBP19.87■□□□□ 0.77
SEMA4D-212ENST00000450295 TRIM41Q8WV44 630 aa19.81■□□□□ 0.76
SEMA4D-212ENST00000450295 ZEB1P37275 1124 aaPredicted RBP19.8■□□□□ 0.76
SEMA4D-212ENST00000450295 ERICH6Q7L0X2 663 aa19.69■□□□□ 0.74
SEMA4D-212ENST00000450295 CCER1Q8TC90 406 aaPredicted RBP19.68■□□□□ 0.74
SEMA4D-212ENST00000450295 MYT1Q01538 1121 aa19.58■□□□□ 0.72
SEMA4D-212ENST00000450295 YTHDC1Q96MU7 727 aaKnown RBP19.56■□□□□ 0.72
SEMA4D-212ENST00000450295 ABCC9O60706 1549 aa19.55■□□□□ 0.72
SEMA4D-212ENST00000450295 RANGAP1P46060 587 aaPredicted RBP19.44■□□□□ 0.7
SEMA4D-212ENST00000450295 HRCP23327 699 aa19.43■□□□□ 0.7
SEMA4D-212ENST00000450295 UBTFP17480 764 aaKnown RBP19.4■□□□□ 0.7
SEMA4D-212ENST00000450295 CCDC180Q9P1Z9 1646 aa19.39■□□□□ 0.69
SEMA4D-212ENST00000450295 PPARGC1BQ86YN6 1023 aaKnown RBP19.31■□□□□ 0.68
SEMA4D-212ENST00000450295 TRIM26Q12899 539 aaPredicted RBP19.28■□□□□ 0.68
SEMA4D-212ENST00000450295 NEFLP07196 543 aa19.26■□□□□ 0.67
SEMA4D-212ENST00000450295 ZCCHC6Q5VYS8 1495 aaKnown RBP19.19■□□□□ 0.66
SEMA4D-212ENST00000450295 CHIC1Q5VXU3 224 aa19.15■□□□□ 0.66
SEMA4D-212ENST00000450295 ATP1B4Q9UN42 357 aaPredicted RBP19.14■□□□□ 0.66
SEMA4D-212ENST00000450295 PABPN1Q86U42 306 aaKnown RBP eCLIP19.09■□□□□ 0.65
SEMA4D-212ENST00000450295 LOC105371045A0A1W2PR82 267 aa19.01■□□□□ 0.63
SEMA4D-212ENST00000450295 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
SEMA4D-212ENST00000450295 RB1CC1Q8TDY2 1594 aa18.77■□□□□ 0.59
SEMA4D-212ENST00000450295 DIEXFQ68CQ4 756 aaKnown RBP18.75■□□□□ 0.59
SEMA4D-212ENST00000450295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.74■□□□□ 0.59
SEMA4D-212ENST00000450295 HNRNPUL2Q1KMD3 747 aaKnown RBP18.73■□□□□ 0.59
SEMA4D-212ENST00000450295 ITGAEP38570 1179 aa18.72■□□□□ 0.59
SEMA4D-212ENST00000450295 NACADO15069 1562 aa18.7■□□□□ 0.58
SEMA4D-212ENST00000450295 DAXXQ9UER7 740 aaPredicted RBP18.64■□□□□ 0.57
SEMA4D-212ENST00000450295 GTF3C3Q9Y5Q9 886 aa18.63■□□□□ 0.57
SEMA4D-212ENST00000450295 DCAF1Q9Y4B6 1507 aa18.61■□□□□ 0.57
SEMA4D-212ENST00000450295 POLR3GLQ9BT43 218 aa18.59■□□□□ 0.57
SEMA4D-212ENST00000450295 CNGB1Q14028 1251 aaPredicted RBP18.52■□□□□ 0.55
SEMA4D-212ENST00000450295 CSRNP3Q8WYN3 585 aa18.46■□□□□ 0.55
SEMA4D-212ENST00000450295 BCANQ96GW7 911 aa18.46■□□□□ 0.55
SEMA4D-212ENST00000450295 RTL5Q5HYW3 569 aaPredicted RBP18.44■□□□□ 0.54
SEMA4D-212ENST00000450295 MYT1LQ9UL68 1186 aa18.43■□□□□ 0.54
SEMA4D-212ENST00000450295 ACIN1Q9UKV3 1341 aaKnown RBP18.34■□□□□ 0.53
SEMA4D-212ENST00000450295 ZNF316A6NFI3 1004 aaPredicted RBP18.3■□□□□ 0.52
SEMA4D-212ENST00000450295 RSF1Q96T23 1441 aaPredicted RBP18.28■□□□□ 0.52
SEMA4D-212ENST00000450295 FAM50AQ14320 339 aaKnown RBP18.26■□□□□ 0.51
SEMA4D-212ENST00000450295 FBLN2P98095 1184 aa18.21■□□□□ 0.51
SEMA4D-212ENST00000450295 NEUROD1Q13562 356 aa18.21■□□□□ 0.51
SEMA4D-212ENST00000450295 MYO15BQ96JP2 1530 aa18.2■□□□□ 0.5
SEMA4D-212ENST00000450295 BAZ1AQ9NRL2 1556 aaPredicted RBP18.19■□□□□ 0.5
SEMA4D-212ENST00000450295 CDK11AQ9UQ88 783 aaPredicted RBP18.17■□□□□ 0.5
SEMA4D-212ENST00000450295 CLSPNQ9HAW4 1339 aa18.16■□□□□ 0.5
SEMA4D-212ENST00000450295 EEA1Q15075 1411 aa18.15■□□□□ 0.5
SEMA4D-212ENST00000450295 BAZ1BQ9UIG0 1483 aaKnown RBP18.14■□□□□ 0.49
SEMA4D-212ENST00000450295 ANP32CO43423 234 aa18.11■□□□□ 0.49
SEMA4D-212ENST00000450295 TRIM52Q96A61 297 aa18.09■□□□□ 0.49
SEMA4D-212ENST00000450295 SLC4A1APQ9BWU0 796 aaKnown RBP18.03■□□□□ 0.48
SEMA4D-212ENST00000450295 P3H3Q8IVL6 736 aa17.99■□□□□ 0.47
SEMA4D-212ENST00000450295 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
SEMA4D-212ENST00000450295 WRNQ14191 1432 aaPredicted RBP eCLIP17.97■□□□□ 0.47
SEMA4D-212ENST00000450295 FKBP8Q14318 412 aa17.89■□□□□ 0.45
SEMA4D-212ENST00000450295 CECR2Q9BXF3 1484 aa17.89■□□□□ 0.45
SEMA4D-212ENST00000450295 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
SEMA4D-212ENST00000450295 ZNF326Q5BKZ1 582 aaKnown RBP17.88■□□□□ 0.45
SEMA4D-212ENST00000450295 KIF27Q86VH2 1401 aa17.86■□□□□ 0.45
SEMA4D-212ENST00000450295 ANP32AP39687 249 aaKnown RBP17.86■□□□□ 0.45
SEMA4D-212ENST00000450295 SMARCA2P51531 1590 aa17.85■□□□□ 0.45
SEMA4D-212ENST00000450295 CLIP1P30622 1438 aa17.84■□□□□ 0.45
SEMA4D-212ENST00000450295 NPM2Q86SE8 214 aaKnown RBP17.83■□□□□ 0.44
SEMA4D-212ENST00000450295 NPM1P06748 294 aaKnown RBP eCLIP17.81■□□□□ 0.44
SEMA4D-212ENST00000450295 CHMP7Q8WUX9 453 aaPredicted RBP17.81■□□□□ 0.44
SEMA4D-212ENST00000450295 CEP164Q9UPV0 1460 aa17.78■□□□□ 0.44
SEMA4D-212ENST00000450295 ZNF777Q9ULD5 760 aaPredicted RBP17.76■□□□□ 0.43
SEMA4D-212ENST00000450295 ARID3CA6NKF2 412 aa17.75■□□□□ 0.43
SEMA4D-212ENST00000450295 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
SEMA4D-212ENST00000450295 TNIKQ9UKE5 1360 aa17.74■□□□□ 0.43
SEMA4D-212ENST00000450295 MTUS2Q5JR59 1369 aa17.73■□□□□ 0.43
SEMA4D-212ENST00000450295 CANXP27824 592 aaKnown RBP17.7■□□□□ 0.42
SEMA4D-212ENST00000450295 EIF5BO60841 1220 aaKnown RBP17.7■□□□□ 0.42
SEMA4D-212ENST00000450295 CEP162Q5TB80 1403 aa17.69■□□□□ 0.42
SEMA4D-212ENST00000450295 TOP2AP11388 1531 aaKnown RBP17.65■□□□□ 0.42
SEMA4D-212ENST00000450295 ERCC6Q03468 1493 aa17.64■□□□□ 0.42
SEMA4D-212ENST00000450295 NBR1Q14596 966 aa17.64■□□□□ 0.41
SEMA4D-212ENST00000450295 BCL11AQ9H165 835 aa17.63■□□□□ 0.41
SEMA4D-212ENST00000450295 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
SEMA4D-212ENST00000450295 HNRNPUQ00839 825 aaKnown RBP eCLIP17.63■□□□□ 0.41
SEMA4D-212ENST00000450295 MIER1Q8N108 512 aa17.63■□□□□ 0.41
SEMA4D-212ENST00000450295 DDX10Q13206 875 aaKnown RBP17.63■□□□□ 0.41
SEMA4D-212ENST00000450295 TONSLQ96HA7 1378 aa17.62■□□□□ 0.41
SEMA4D-212ENST00000450295 TSPY4P0CV99 314 aa17.61■□□□□ 0.41
SEMA4D-212ENST00000450295 TSPY10P0CW01 314 aa17.61■□□□□ 0.41
SEMA4D-212ENST00000450295 ZBTB47Q9UFB7 747 aaPredicted RBP17.6■□□□□ 0.41
SEMA4D-212ENST00000450295 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
SEMA4D-212ENST00000450295 ESF1Q9H501 851 aaKnown RBP17.57■□□□□ 0.4
SEMA4D-212ENST00000450295 FAM9BQ8IZU0 186 aa17.56■□□□□ 0.4
SEMA4D-212ENST00000450295 PLEKHD1A6NEE1 506 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms