RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 PRG4Q92954 1404 aaPredicted RBP22.54■■□□□ 1.2
SEC22C-209ENST00000449617 JPH4Q96JJ6 628 aa22.52■■□□□ 1.2
SEC22C-209ENST00000449617 CARMIL1Q5VZK9 1371 aa22.5■■□□□ 1.19
SEC22C-209ENST00000449617 KIAA0586Q9BVV6 1533 aa22.47■■□□□ 1.19
SEC22C-209ENST00000449617 IQGAP2Q13576 1575 aa22.33■■□□□ 1.17
SEC22C-209ENST00000449617 RAPGEF2Q9Y4G8 1499 aa22.33■■□□□ 1.16
SEC22C-209ENST00000449617 ADCY10Q96PN6 1610 aa22.28■■□□□ 1.16
SEC22C-209ENST00000449617 CARMIL2Q6F5E8 1435 aa22.24■■□□□ 1.15
SEC22C-209ENST00000449617 PTPRGP23470 1445 aa22.21■■□□□ 1.15
SEC22C-209ENST00000449617 DISP1Q96F81 1524 aa22.19■■□□□ 1.14
SEC22C-209ENST00000449617 TNIKQ9UKE5 1360 aa22.19■■□□□ 1.14
SEC22C-209ENST00000449617 UGGT2Q9NYU1 1516 aa22.19■■□□□ 1.14
SEC22C-209ENST00000449617 KIF13AQ9H1H9 1805 aa22.18■■□□□ 1.14
SEC22C-209ENST00000449617 CTTNBP2Q8WZ74 1663 aa22.18■■□□□ 1.14
SEC22C-209ENST00000449617 PRXQ9BXM0 1461 aa22.17■■□□□ 1.14
SEC22C-209ENST00000449617 MAPKBP1O60336 1514 aa22.17■■□□□ 1.14
SEC22C-209ENST00000449617 NPM1P06748 294 aaKnown RBP eCLIP22.17■■□□□ 1.14
SEC22C-209ENST00000449617 TTBK1Q5TCY1 1321 aaPredicted RBP22.17■■□□□ 1.14
SEC22C-209ENST00000449617 KIAA0556O60303 1618 aa22.12■■□□□ 1.13
SEC22C-209ENST00000449617 ABCC10Q5T3U5 1492 aa22.1■■□□□ 1.13
SEC22C-209ENST00000449617 DIP2BQ9P265 1576 aa22.08■■□□□ 1.13
SEC22C-209ENST00000449617 ABCC2Q92887 1545 aa22.07■■□□□ 1.12
SEC22C-209ENST00000449617 UHRF1BP1LA0JNW5 1464 aa22.06■■□□□ 1.12
SEC22C-209ENST00000449617 FAM69CQ0P6D2 419 aa22.06■■□□□ 1.12
SEC22C-209ENST00000449617 UACAQ9BZF9 1416 aa22.06■■□□□ 1.12
SEC22C-209ENST00000449617 CSRNP3Q8WYN3 585 aa22.04■■□□□ 1.12
SEC22C-209ENST00000449617 EEA1Q15075 1411 aa22.02■■□□□ 1.12
SEC22C-209ENST00000449617 GOLGA3Q08378 1498 aa22.02■■□□□ 1.12
SEC22C-209ENST00000449617 ASXL2Q76L83 1435 aa21.97■■□□□ 1.11
SEC22C-209ENST00000449617 KDM5BQ9UGL1 1544 aa21.96■■□□□ 1.11
SEC22C-209ENST00000449617 PLB1Q6P1J6 1458 aa21.94■■□□□ 1.1
SEC22C-209ENST00000449617 ZCCHC11Q5TAX3 1644 aaKnown RBP21.94■■□□□ 1.1
SEC22C-209ENST00000449617 TSPOAP1O95153 1857 aa21.93■■□□□ 1.1
SEC22C-209ENST00000449617 FAM9AQ8IZU1 332 aaPredicted RBP21.93■■□□□ 1.1
SEC22C-209ENST00000449617 ABCA8O94911 1581 aa21.9■■□□□ 1.1
SEC22C-209ENST00000449617 CHIC1Q5VXU3 224 aa21.89■■□□□ 1.09
SEC22C-209ENST00000449617 GLI2P10070 1586 aa21.87■■□□□ 1.09
SEC22C-209ENST00000449617 KIF21BO75037 1637 aa21.86■■□□□ 1.09
SEC22C-209ENST00000449617 SAMD9Q5K651 1589 aa21.86■■□□□ 1.09
SEC22C-209ENST00000449617 P3H3Q8IVL6 736 aa21.84■■□□□ 1.09
SEC22C-209ENST00000449617 EPRSP07814 1512 aaKnown RBP21.84■■□□□ 1.09
SEC22C-209ENST00000449617 PPRC1Q5VV67 1664 aaKnown RBP21.81■■□□□ 1.08
SEC22C-209ENST00000449617 KDM6BO15054 1643 aa21.81■■□□□ 1.08
SEC22C-209ENST00000449617 WDR7Q9Y4E6 1490 aa21.8■■□□□ 1.08
SEC22C-209ENST00000449617 MAP3K4Q9Y6R4 1608 aa21.78■■□□□ 1.08
SEC22C-209ENST00000449617 RANGAP1P46060 587 aaPredicted RBP21.77■■□□□ 1.08
SEC22C-209ENST00000449617 RAPGEF6Q8TEU7 1601 aa21.72■■□□□ 1.07
SEC22C-209ENST00000449617 FHOD3Q2V2M9 1422 aa21.72■■□□□ 1.07
SEC22C-209ENST00000449617 ARID3CA6NKF2 412 aa21.72■■□□□ 1.07
SEC22C-209ENST00000449617 ATP10BO94823 1461 aa21.69■■□□□ 1.06
SEC22C-209ENST00000449617 EFCAB5A4FU69 1503 aa21.69■■□□□ 1.06
SEC22C-209ENST00000449617 EHMT2Q96KQ7 1210 aa21.69■■□□□ 1.06
SEC22C-209ENST00000449617 TEX14Q8IWB6 1497 aa21.68■■□□□ 1.06
SEC22C-209ENST00000449617 KCNH8Q96L42 1107 aa21.67■■□□□ 1.06
SEC22C-209ENST00000449617 CFAP43Q8NDM7 1665 aa21.66■■□□□ 1.06
SEC22C-209ENST00000449617 UBTFP17480 764 aaKnown RBP21.64■■□□□ 1.06
SEC22C-209ENST00000449617 AEBP2Q6ZN18 517 aaPredicted RBP21.64■■□□□ 1.06
SEC22C-209ENST00000449617 NUP153P49790 1475 aaKnown RBP21.63■■□□□ 1.05
SEC22C-209ENST00000449617 CD109Q6YHK3 1445 aa21.62■■□□□ 1.05
SEC22C-209ENST00000449617 COL17A1Q9UMD9 1497 aaPredicted RBP21.61■■□□□ 1.05
SEC22C-209ENST00000449617 MAGI3Q5TCQ9 1506 aa21.6■■□□□ 1.05
SEC22C-209ENST00000449617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.56■■□□□ 1.04
SEC22C-209ENST00000449617 HNRNPUL2Q1KMD3 747 aaKnown RBP21.56■■□□□ 1.04
SEC22C-209ENST00000449617 ABCA9Q8IUA7 1624 aa21.55■■□□□ 1.04
SEC22C-209ENST00000449617 ARHGAP35Q9NRY4 1499 aa21.53■■□□□ 1.04
SEC22C-209ENST00000449617 FMN1Q68DA7 1419 aa21.47■■□□□ 1.03
SEC22C-209ENST00000449617 CDK13Q14004 1512 aaKnown RBP21.46■■□□□ 1.03
SEC22C-209ENST00000449617 HECW1Q76N89 1606 aa21.44■■□□□ 1.02
SEC22C-209ENST00000449617 KDM4FA0A1W2PPD8 638 aa21.44■■□□□ 1.02
SEC22C-209ENST00000449617 PLEKHD1A6NEE1 506 aa21.44■■□□□ 1.02
SEC22C-209ENST00000449617 ARAP3Q8WWN8 1544 aa21.42■■□□□ 1.02
SEC22C-209ENST00000449617 ATP1B4Q9UN42 357 aaPredicted RBP21.39■■□□□ 1.02
SEC22C-209ENST00000449617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.39■■□□□ 1.01
SEC22C-209ENST00000449617 NEO1Q92859 1461 aa21.39■■□□□ 1.01
SEC22C-209ENST00000449617 TTC37Q6PGP7 1564 aa21.38■■□□□ 1.01
SEC22C-209ENST00000449617 PHLDB1Q86UU1 1377 aa21.38■■□□□ 1.01
SEC22C-209ENST00000449617 ADGRL1O94910 1474 aa21.37■■□□□ 1.01
SEC22C-209ENST00000449617 LRRIQ1Q96JM4 1722 aa21.33■■□□□ 1.01
SEC22C-209ENST00000449617 PCF11O94913 1555 aaKnown RBP21.32■■□□□ 1
SEC22C-209ENST00000449617 FRMPD1Q5SYB0 1578 aa21.31■■□□□ 1
SEC22C-209ENST00000449617 CFAP74Q9C0B2 1584 aa21.3■■□□□ 1
SEC22C-209ENST00000449617 FANCAO15360 1455 aa21.3■■□□□ 1
SEC22C-209ENST00000449617 RAPGEF3O95398 923 aa21.29■■□□□ 1
SEC22C-209ENST00000449617 CLIP1P30622 1438 aa21.29■■□□□ 1
SEC22C-209ENST00000449617 CASKIN1Q8WXD9 1431 aa21.28■■□□□ 1
SEC22C-209ENST00000449617 CDK11AQ9UQ88 783 aaPredicted RBP21.28■■□□□ 1
SEC22C-209ENST00000449617 AKNAQ7Z591 1439 aa21.27■■□□□ 1
SEC22C-209ENST00000449617 KIF14Q15058 1648 aa21.26■□□□□ 0.99
SEC22C-209ENST00000449617 TROQ12816 1431 aaPredicted RBP21.25■□□□□ 0.99
SEC22C-209ENST00000449617 RICTORQ6R327 1708 aa21.24■□□□□ 0.99
SEC22C-209ENST00000449617 DENND4BO75064 1496 aaPredicted RBP21.24■□□□□ 0.99
SEC22C-209ENST00000449617 MYO5CQ9NQX4 1742 aa21.24■□□□□ 0.99
SEC22C-209ENST00000449617 PLCH2O75038 1416 aa21.23■□□□□ 0.99
SEC22C-209ENST00000449617 CCDC18Q5T9S5 1454 aa21.23■□□□□ 0.99
SEC22C-209ENST00000449617 FYCO1Q9BQS8 1478 aa21.22■□□□□ 0.99
SEC22C-209ENST00000449617 ARHGEF40Q8TER5 1519 aa21.19■□□□□ 0.98
SEC22C-209ENST00000449617 ZMYM4Q5VZL5 1548 aa21.16■□□□□ 0.98
SEC22C-209ENST00000449617 SCAPERQ9BY12 1400 aa21.14■□□□□ 0.98
SEC22C-209ENST00000449617 POGZQ7Z3K3 1410 aa21.13■□□□□ 0.97
SEC22C-209ENST00000449617 EFCAB2Q5VUJ9 269 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms