RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 NISCHQ9Y2I1 1504 aa32.39■■■□□ 2.78
SEC22C-209ENST00000449617 CCDC180Q9P1Z9 1646 aa28.95■■■□□ 2.23
SEC22C-209ENST00000449617 ABCC9O60706 1549 aa28.64■■■□□ 2.18
SEC22C-209ENST00000449617 RB1CC1Q8TDY2 1594 aa27.39■■□□□ 1.98
SEC22C-209ENST00000449617 NACADO15069 1562 aa27.28■■□□□ 1.96
SEC22C-209ENST00000449617 DCAF8L2P0C7V8 631 aa27.16■■□□□ 1.94
SEC22C-209ENST00000449617 MYO15BQ96JP2 1530 aa27■■□□□ 1.91
SEC22C-209ENST00000449617 ZCCHC6Q5VYS8 1495 aaKnown RBP26.92■■□□□ 1.9
SEC22C-209ENST00000449617 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
SEC22C-209ENST00000449617 DCAF1Q9Y4B6 1507 aa26.77■■□□□ 1.88
SEC22C-209ENST00000449617 PABPN1Q86U42 306 aaKnown RBP eCLIP26.7■■□□□ 1.86
SEC22C-209ENST00000449617 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
SEC22C-209ENST00000449617 DNAJC5BQ9UF47 199 aa26.57■■□□□ 1.84
SEC22C-209ENST00000449617 SCRIBQ14160 1630 aa26.42■■□□□ 1.82
SEC22C-209ENST00000449617 SHROOM4Q9ULL8 1493 aa26.26■■□□□ 1.79
SEC22C-209ENST00000449617 EIF4G1Q04637 1599 aaKnown RBP25.92■■□□□ 1.74
SEC22C-209ENST00000449617 CC2D2AQ9P2K1 1620 aa25.9■■□□□ 1.74
SEC22C-209ENST00000449617 CECR2Q9BXF3 1484 aa25.76■■□□□ 1.71
SEC22C-209ENST00000449617 SMARCA4P51532 1647 aa25.22■■□□□ 1.63
SEC22C-209ENST00000449617 NCAPD3P42695 1498 aa25.16■■□□□ 1.62
SEC22C-209ENST00000449617 ATAD2BQ9ULI0 1458 aa25.14■■□□□ 1.62
SEC22C-209ENST00000449617 BAZ1AQ9NRL2 1556 aaPredicted RBP25.13■■□□□ 1.61
SEC22C-209ENST00000449617 SMARCA2P51531 1590 aa25.1■■□□□ 1.61
SEC22C-209ENST00000449617 HMGXB3Q12766 1538 aa25.03■■□□□ 1.6
SEC22C-209ENST00000449617 MROH2BQ7Z745 1585 aa24.97■■□□□ 1.59
SEC22C-209ENST00000449617 PEG3Q9GZU2 1588 aa24.96■■□□□ 1.59
SEC22C-209ENST00000449617 BAZ1BQ9UIG0 1483 aaKnown RBP24.93■■□□□ 1.58
SEC22C-209ENST00000449617 ERCC6Q03468 1493 aa24.71■■□□□ 1.55
SEC22C-209ENST00000449617 NESP48681 1621 aa24.7■■□□□ 1.55
SEC22C-209ENST00000449617 WIZO95785 1651 aa24.7■■□□□ 1.54
SEC22C-209ENST00000449617 LAMC3Q9Y6N6 1575 aa24.57■■□□□ 1.52
SEC22C-209ENST00000449617 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
SEC22C-209ENST00000449617 CUX2O14529 1486 aa24.55■■□□□ 1.52
SEC22C-209ENST00000449617 KIF21AQ7Z4S6 1674 aa24.42■■□□□ 1.5
SEC22C-209ENST00000449617 CADPSQ9ULU8 1353 aa24.41■■□□□ 1.5
SEC22C-209ENST00000449617 THOC2Q8NI27 1593 aaKnown RBP24.4■■□□□ 1.5
SEC22C-209ENST00000449617 TOP2AP11388 1531 aaKnown RBP24.4■■□□□ 1.5
SEC22C-209ENST00000449617 PDS5BQ9NTI5 1447 aa24.4■■□□□ 1.5
SEC22C-209ENST00000449617 CFTRP13569 1480 aa24.21■■□□□ 1.47
SEC22C-209ENST00000449617 MRC2Q9UBG0 1479 aa24.19■■□□□ 1.46
SEC22C-209ENST00000449617 CEP164Q9UPV0 1460 aa24.16■■□□□ 1.46
SEC22C-209ENST00000449617 DNAJC5Q9H3Z4 198 aa24.16■■□□□ 1.46
SEC22C-209ENST00000449617 FANCD2Q9BXW9 1451 aa24.15■■□□□ 1.46
SEC22C-209ENST00000449617 WDR62O43379 1518 aa24.12■■□□□ 1.45
SEC22C-209ENST00000449617 CCDC88BA6NC98 1476 aa24.11■■□□□ 1.45
SEC22C-209ENST00000449617 PRDM2Q13029 1718 aa24.05■■□□□ 1.44
SEC22C-209ENST00000449617 URB2Q14146 1524 aaKnown RBP23.95■■□□□ 1.42
SEC22C-209ENST00000449617 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
SEC22C-209ENST00000449617 DNMBPQ6XZF7 1577 aa23.69■■□□□ 1.38
SEC22C-209ENST00000449617 ABCC8Q09428 1581 aa23.68■■□□□ 1.38
SEC22C-209ENST00000449617 SUPT5HO00267 1087 aaKnown RBP23.67■■□□□ 1.38
SEC22C-209ENST00000449617 IFT140Q96RY7 1462 aa23.65■■□□□ 1.38
SEC22C-209ENST00000449617 ZNF608Q9ULD9 1512 aaPredicted RBP23.6■■□□□ 1.37
SEC22C-209ENST00000449617 POLA1P09884 1462 aaPredicted RBP23.52■■□□□ 1.36
SEC22C-209ENST00000449617 TARBP1Q13395 1621 aaKnown RBP23.51■■□□□ 1.35
SEC22C-209ENST00000449617 EIF4G3O43432 1585 aaKnown RBP23.5■■□□□ 1.35
SEC22C-209ENST00000449617 CUX1P39880 1505 aa23.45■■□□□ 1.34
SEC22C-209ENST00000449617 OSCARQ8IYS5 282 aa23.45■■□□□ 1.34
SEC22C-209ENST00000449617 FGD5Q6ZNL6 1462 aa23.42■■□□□ 1.34
SEC22C-209ENST00000449617 RAD54L2Q9Y4B4 1467 aa23.42■■□□□ 1.34
SEC22C-209ENST00000449617 AQRO60306 1485 aaKnown RBP eCLIP23.41■■□□□ 1.341e-6■■■■■ 30.6
SEC22C-209ENST00000449617 SOGA1O94964 1423 aa23.38■■□□□ 1.33
SEC22C-209ENST00000449617 TDRD9Q8NDG6 1382 aaKnown RBP23.31■■□□□ 1.32
SEC22C-209ENST00000449617 WDR97A6NE52 1622 aa23.29■■□□□ 1.32
SEC22C-209ENST00000449617 CHD1O14646 1710 aa23.29■■□□□ 1.32
SEC22C-209ENST00000449617 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
SEC22C-209ENST00000449617 SNAPC4Q5SXM2 1469 aa23.2■■□□□ 1.3
SEC22C-209ENST00000449617 FBLN2P98095 1184 aa23.18■■□□□ 1.3
SEC22C-209ENST00000449617 RIMBP3CA6NJZ7 1639 aa23.17■■□□□ 1.3
SEC22C-209ENST00000449617 RIMBP3BA6NNM3 1639 aa23.17■■□□□ 1.3
SEC22C-209ENST00000449617 RIMBP3Q9UFD9 1639 aa23.17■■□□□ 1.3
SEC22C-209ENST00000449617 GRIN2BQ13224 1484 aa23.16■■□□□ 1.3
SEC22C-209ENST00000449617 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
SEC22C-209ENST00000449617 ABCA10Q8WWZ4 1543 aa23.16■■□□□ 1.3
SEC22C-209ENST00000449617 BIVM-ERCC5R4GMW8 1640 aa23.16■■□□□ 1.3
SEC22C-209ENST00000449617 SYNJ1O43426 1573 aa23.16■■□□□ 1.3
SEC22C-209ENST00000449617 TOP2BQ02880 1626 aa23.15■■□□□ 1.3
SEC22C-209ENST00000449617 MAGI1Q96QZ7 1491 aaPredicted RBP23.15■■□□□ 1.3
SEC22C-209ENST00000449617 PBRM1Q86U86 1689 aa23.14■■□□□ 1.29
SEC22C-209ENST00000449617 GAPVD1Q14C86 1478 aa23.13■■□□□ 1.29
SEC22C-209ENST00000449617 ABCA5Q8WWZ7 1642 aa23.12■■□□□ 1.29
SEC22C-209ENST00000449617 ARHGEF11O15085 1522 aa23.12■■□□□ 1.29
SEC22C-209ENST00000449617 CHMP7Q8WUX9 453 aaPredicted RBP23.06■■□□□ 1.28
SEC22C-209ENST00000449617 SYNJ2O15056 1496 aa23.06■■□□□ 1.28
SEC22C-209ENST00000449617 CLASP1Q7Z460 1538 aa23■■□□□ 1.27
SEC22C-209ENST00000449617 ADAMTS12P58397 1594 aa22.93■■□□□ 1.26
SEC22C-209ENST00000449617 ARAP1Q96P48 1450 aa22.92■■□□□ 1.26
SEC22C-209ENST00000449617 CYB5RLQ6IPT4 315 aa22.89■■□□□ 1.25
SEC22C-209ENST00000449617 GRIN2AQ12879 1464 aa22.88■■□□□ 1.25
SEC22C-209ENST00000449617 ERICH3Q5RHP9 1530 aa22.88■■□□□ 1.25
SEC22C-209ENST00000449617 FHAD1B1AJZ9 1412 aa22.85■■□□□ 1.25
SEC22C-209ENST00000449617 CEP170Q5SW79 1584 aa22.79■■□□□ 1.24
SEC22C-209ENST00000449617 NUP160Q12769 1436 aa22.78■■□□□ 1.24
SEC22C-209ENST00000449617 KIF27Q86VH2 1401 aa22.69■■□□□ 1.22
SEC22C-209ENST00000449617 ERCC6L2Q5T890 1561 aa22.67■■□□□ 1.22
SEC22C-209ENST00000449617 SHROOM2Q13796 1616 aa22.66■■□□□ 1.22
SEC22C-209ENST00000449617 IGF1RP08069 1367 aa22.63■■□□□ 1.21
SEC22C-209ENST00000449617 CUL7Q14999 1698 aa22.63■■□□□ 1.21
SEC22C-209ENST00000449617 RUSC2Q8N2Y8 1516 aa22.6■■□□□ 1.21
SEC22C-209ENST00000449617 TRHP20396 242 aaPredicted RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms