RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 CEP170Q5SW79 1584 aa19.26■□□□□ 0.67
SCAP-208ENST00000448217 FBLN2P98095 1184 aa19.23■□□□□ 0.67
SCAP-208ENST00000448217 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
SCAP-208ENST00000448217 IQGAP2Q13576 1575 aa19.21■□□□□ 0.67
SCAP-208ENST00000448217 CEP162Q5TB80 1403 aa19.18■□□□□ 0.66
SCAP-208ENST00000448217 CLASP1Q7Z460 1538 aa19.16■□□□□ 0.66
SCAP-208ENST00000448217 UGGT2Q9NYU1 1516 aa19.16■□□□□ 0.66
SCAP-208ENST00000448217 CLIP1P30622 1438 aa19.14■□□□□ 0.65
SCAP-208ENST00000448217 EFCAB5A4FU69 1503 aa19.14■□□□□ 0.65
SCAP-208ENST00000448217 SHROOM2Q13796 1616 aa19.11■□□□□ 0.65
SCAP-208ENST00000448217 SAMD9Q5K651 1589 aa19.11■□□□□ 0.65
SCAP-208ENST00000448217 ARHGAP35Q9NRY4 1499 aa19.09■□□□□ 0.65
SCAP-208ENST00000448217 OSCARQ8IYS5 282 aa19.09■□□□□ 0.65
SCAP-208ENST00000448217 JPH4Q96JJ6 628 aa19.06■□□□□ 0.64
SCAP-208ENST00000448217 DISP1Q96F81 1524 aa19.05■□□□□ 0.64
SCAP-208ENST00000448217 KIAA0556O60303 1618 aa19.03■□□□□ 0.64
SCAP-208ENST00000448217 ARAP1Q96P48 1450 aa19.02■□□□□ 0.63
SCAP-208ENST00000448217 CARMIL2Q6F5E8 1435 aa19■□□□□ 0.63
SCAP-208ENST00000448217 PRG4Q92954 1404 aaPredicted RBP18.98■□□□□ 0.63
SCAP-208ENST00000448217 RANGAP1P46060 587 aaPredicted RBP18.96■□□□□ 0.63
SCAP-208ENST00000448217 VPS8Q8N3P4 1428 aa18.95■□□□□ 0.62
SCAP-208ENST00000448217 FHOD3Q2V2M9 1422 aa18.94■□□□□ 0.62
SCAP-208ENST00000448217 FMN1Q68DA7 1419 aa18.92■□□□□ 0.62
SCAP-208ENST00000448217 P3H3Q8IVL6 736 aa18.89■□□□□ 0.61
SCAP-208ENST00000448217 ERCC6L2Q5T890 1561 aa18.89■□□□□ 0.61
SCAP-208ENST00000448217 CASKIN1Q8WXD9 1431 aa18.85■□□□□ 0.61
SCAP-208ENST00000448217 FYCO1Q9BQS8 1478 aa18.84■□□□□ 0.61
SCAP-208ENST00000448217 PTPRGP23470 1445 aa18.83■□□□□ 0.61
SCAP-208ENST00000448217 PCF11O94913 1555 aaKnown RBP18.81■□□□□ 0.6
SCAP-208ENST00000448217 ABCA8O94911 1581 aa18.8■□□□□ 0.6
SCAP-208ENST00000448217 ARHGEF11O15085 1522 aa18.79■□□□□ 0.6
SCAP-208ENST00000448217 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
SCAP-208ENST00000448217 MAP3K1Q13233 1512 aa18.78■□□□□ 0.6
SCAP-208ENST00000448217 HECW1Q76N89 1606 aa18.77■□□□□ 0.6
SCAP-208ENST00000448217 UHRF1BP1LA0JNW5 1464 aa18.75■□□□□ 0.59
SCAP-208ENST00000448217 PLB1Q6P1J6 1458 aa18.74■□□□□ 0.59
SCAP-208ENST00000448217 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
SCAP-208ENST00000448217 RIMBP3CA6NJZ7 1639 aa18.73■□□□□ 0.59
SCAP-208ENST00000448217 RIMBP3BA6NNM3 1639 aa18.73■□□□□ 0.59
SCAP-208ENST00000448217 RIMBP3Q9UFD9 1639 aa18.73■□□□□ 0.59
SCAP-208ENST00000448217 NUP153P49790 1475 aaKnown RBP18.72■□□□□ 0.59
SCAP-208ENST00000448217 CCDC18Q5T9S5 1454 aa18.71■□□□□ 0.59
SCAP-208ENST00000448217 ABCC2Q92887 1545 aa18.71■□□□□ 0.59
SCAP-208ENST00000448217 LRRIQ1Q96JM4 1722 aa18.71■□□□□ 0.59
SCAP-208ENST00000448217 CFAP43Q8NDM7 1665 aa18.7■□□□□ 0.58
SCAP-208ENST00000448217 TIAM1Q13009 1591 aa18.69■□□□□ 0.58
SCAP-208ENST00000448217 EPRSP07814 1512 aaKnown RBP18.69■□□□□ 0.58
SCAP-208ENST00000448217 APLP2Q06481 763 aa18.65■□□□□ 0.58
SCAP-208ENST00000448217 TTBK1Q5TCY1 1321 aaPredicted RBP18.65■□□□□ 0.58
SCAP-208ENST00000448217 KDM5BQ9UGL1 1544 aa18.64■□□□□ 0.57
SCAP-208ENST00000448217 ADCY10Q96PN6 1610 aa18.63■□□□□ 0.57
SCAP-208ENST00000448217 ATP10BO94823 1461 aa18.63■□□□□ 0.57
SCAP-208ENST00000448217 CDK13Q14004 1512 aaKnown RBP18.6■□□□□ 0.57
SCAP-208ENST00000448217 ATP1B4Q9UN42 357 aaPredicted RBP18.6■□□□□ 0.57
SCAP-208ENST00000448217 LRRC9Q6ZRR7 1453 aa18.59■□□□□ 0.57
SCAP-208ENST00000448217 ZCCHC11Q5TAX3 1644 aaKnown RBP18.56■□□□□ 0.56
SCAP-208ENST00000448217 EHBP1L1Q8N3D4 1523 aa18.55■□□□□ 0.56
SCAP-208ENST00000448217 KANK4Q5T7N3 995 aaPredicted RBP18.55■□□□□ 0.56
SCAP-208ENST00000448217 DNAJC5Q9H3Z4 198 aa18.55■□□□□ 0.56
SCAP-208ENST00000448217 CDK11AQ9UQ88 783 aaPredicted RBP18.55■□□□□ 0.56
SCAP-208ENST00000448217 MAGI3Q5TCQ9 1506 aa18.54■□□□□ 0.56
SCAP-208ENST00000448217 CYB5RLQ6IPT4 315 aa18.52■□□□□ 0.56
SCAP-208ENST00000448217 TROQ12816 1431 aaPredicted RBP18.51■□□□□ 0.55
SCAP-208ENST00000448217 MTUS2Q5JR59 1369 aa18.51■□□□□ 0.55
SCAP-208ENST00000448217 PLEKHD1A6NEE1 506 aa18.48■□□□□ 0.55
SCAP-208ENST00000448217 SUPT6HQ7KZ85 1726 aaKnown RBP18.48■□□□□ 0.55
SCAP-208ENST00000448217 ARID3CA6NKF2 412 aa18.47■□□□□ 0.55
SCAP-208ENST00000448217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.46■□□□□ 0.55
SCAP-208ENST00000448217 HNRNPUL2Q1KMD3 747 aaKnown RBP18.46■□□□□ 0.55
SCAP-208ENST00000448217 MAPKBP1O60336 1514 aa18.45■□□□□ 0.54
SCAP-208ENST00000448217 NPM1P06748 294 aaKnown RBP eCLIP18.45■□□□□ 0.54
SCAP-208ENST00000448217 NCOA2Q15596 1464 aa18.43■□□□□ 0.54
SCAP-208ENST00000448217 WDR7Q9Y4E6 1490 aa18.43■□□□□ 0.54
SCAP-208ENST00000448217 KIF14Q15058 1648 aa18.41■□□□□ 0.54
SCAP-208ENST00000448217 ASXL2Q76L83 1435 aa18.41■□□□□ 0.54
SCAP-208ENST00000448217 PPARGC1BQ86YN6 1023 aaKnown RBP18.41■□□□□ 0.54
SCAP-208ENST00000448217 ABCC10Q5T3U5 1492 aa18.39■□□□□ 0.54
SCAP-208ENST00000448217 PHLDB1Q86UU1 1377 aa18.36■□□□□ 0.53
SCAP-208ENST00000448217 MYOM3Q5VTT5 1437 aa18.35■□□□□ 0.53
SCAP-208ENST00000448217 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.34■□□□□ 0.531e-6■■■□□ 14.8
SCAP-208ENST00000448217 RRBP1Q9P2E9 1410 aaKnown RBP18.34■□□□□ 0.53
SCAP-208ENST00000448217 ABCA9Q8IUA7 1624 aa18.33■□□□□ 0.52
SCAP-208ENST00000448217 MIA2Q96PC5 1412 aa18.32■□□□□ 0.52
SCAP-208ENST00000448217 ITSN2Q9NZM3 1697 aa18.32■□□□□ 0.52
SCAP-208ENST00000448217 GPATCH8Q9UKJ3 1502 aaKnown RBP18.32■□□□□ 0.52
SCAP-208ENST00000448217 CCNB3Q8WWL7 1395 aa18.31■□□□□ 0.52
SCAP-208ENST00000448217 TTC37Q6PGP7 1564 aa18.31■□□□□ 0.52
SCAP-208ENST00000448217 CDC42BPAQ5VT25 1732 aa18.31■□□□□ 0.52
SCAP-208ENST00000448217 GLI2P10070 1586 aa18.3■□□□□ 0.52
SCAP-208ENST00000448217 ARAP3Q8WWN8 1544 aa18.3■□□□□ 0.52
SCAP-208ENST00000448217 FGD6Q6ZV73 1430 aa18.3■□□□□ 0.52
SCAP-208ENST00000448217 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.3■□□□□ 0.52
SCAP-208ENST00000448217 TRIM26Q12899 539 aaPredicted RBP18.29■□□□□ 0.52
SCAP-208ENST00000448217 PREX2Q70Z35 1606 aa18.28■□□□□ 0.52
SCAP-208ENST00000448217 MYO5CQ9NQX4 1742 aa18.28■□□□□ 0.52
SCAP-208ENST00000448217 KCNH8Q96L42 1107 aa18.27■□□□□ 0.52
SCAP-208ENST00000448217 TCOF1Q13428 1488 aaKnown RBP18.26■□□□□ 0.51
SCAP-208ENST00000448217 CDC42BPBQ9Y5S2 1711 aa18.26■□□□□ 0.51
SCAP-208ENST00000448217 DIP2BQ9P265 1576 aa18.25■□□□□ 0.51
SCAP-208ENST00000448217 PLCH2O75038 1416 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms