RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 JPH4Q96JJ6 628 aa42.18■■■■■ 4.34
UFD1-204ENST00000447868 KIAA0586Q9BVV6 1533 aa42.14■■■■■ 4.34
UFD1-204ENST00000447868 PRG4Q92954 1404 aaPredicted RBP42.13■■■■■ 4.34
UFD1-204ENST00000447868 RAPGEF2Q9Y4G8 1499 aa42.11■■■■■ 4.33
UFD1-204ENST00000447868 CHIC1Q5VXU3 224 aa42■■■■■ 4.31
UFD1-204ENST00000447868 IQGAP2Q13576 1575 aa41.91■■■■■ 4.3
UFD1-204ENST00000447868 PRXQ9BXM0 1461 aa41.91■■■■■ 4.3
UFD1-204ENST00000447868 CSRNP3Q8WYN3 585 aa41.87■■■■■ 4.29
UFD1-204ENST00000447868 EEA1Q15075 1411 aa41.83■■■■■ 4.29
UFD1-204ENST00000447868 FAM9AQ8IZU1 332 aaPredicted RBP41.81■■■■■ 4.28
UFD1-204ENST00000447868 CTTNBP2Q8WZ74 1663 aa41.75■■■■■ 4.27
UFD1-204ENST00000447868 CARMIL2Q6F5E8 1435 aa41.71■■■■■ 4.27
UFD1-204ENST00000447868 TRHP20396 242 aaPredicted RBP41.67■■■■■ 4.26
UFD1-204ENST00000447868 UGGT2Q9NYU1 1516 aa41.65■■■■■ 4.26
UFD1-204ENST00000447868 TTBK1Q5TCY1 1321 aaPredicted RBP41.65■■■■■ 4.26
UFD1-204ENST00000447868 DISP1Q96F81 1524 aa41.62■■■■■ 4.25
UFD1-204ENST00000447868 TNIKQ9UKE5 1360 aa41.6■■■■■ 4.25
UFD1-204ENST00000447868 PTPRGP23470 1445 aa41.59■■■■■ 4.25
UFD1-204ENST00000447868 KIAA0556O60303 1618 aa41.52■■■■■ 4.24
UFD1-204ENST00000447868 ADCY10Q96PN6 1610 aa41.51■■■■■ 4.23
UFD1-204ENST00000447868 KIF21BO75037 1637 aa41.44■■■■■ 4.22
UFD1-204ENST00000447868 NPM1P06748 294 aaKnown RBP eCLIP41.42■■■■■ 4.22
UFD1-204ENST00000447868 GOLGA3Q08378 1498 aa41.41■■■■■ 4.22
UFD1-204ENST00000447868 EHMT2Q96KQ7 1210 aa41.34■■■■■ 4.21
UFD1-204ENST00000447868 UACAQ9BZF9 1416 aa41.3■■■■■ 4.2
UFD1-204ENST00000447868 RANGAP1P46060 587 aaPredicted RBP41.25■■■■■ 4.19
UFD1-204ENST00000447868 UHRF1BP1LA0JNW5 1464 aa41.24■■■■■ 4.19
UFD1-204ENST00000447868 P3H3Q8IVL6 736 aa41.24■■■■■ 4.19
UFD1-204ENST00000447868 MAPKBP1O60336 1514 aa41.23■■■■■ 4.19
UFD1-204ENST00000447868 ABCC2Q92887 1545 aa41.23■■■■■ 4.19
UFD1-204ENST00000447868 UBTFP17480 764 aaKnown RBP41.18■■■■■ 4.18
UFD1-204ENST00000447868 SAMD9Q5K651 1589 aa41.17■■■■■ 4.18
UFD1-204ENST00000447868 PLB1Q6P1J6 1458 aa41.15■■■■■ 4.18
UFD1-204ENST00000447868 KIF13AQ9H1H9 1805 aa41.13■■■■■ 4.17
UFD1-204ENST00000447868 ABCC10Q5T3U5 1492 aa41.08■■■■■ 4.17
UFD1-204ENST00000447868 ABCA8O94911 1581 aa41.06■■■■■ 4.16
UFD1-204ENST00000447868 KDM5BQ9UGL1 1544 aa41.05■■■■■ 4.16
UFD1-204ENST00000447868 FAM69CQ0P6D2 419 aa41.05■■■■■ 4.16
UFD1-204ENST00000447868 ZCCHC11Q5TAX3 1644 aaKnown RBP41.02■■■■■ 4.16
UFD1-204ENST00000447868 DIP2BQ9P265 1576 aa41.02■■■■■ 4.16
UFD1-204ENST00000447868 ASXL2Q76L83 1435 aa41■■■■■ 4.15
UFD1-204ENST00000447868 FHOD3Q2V2M9 1422 aa40.98■■■■■ 4.15
UFD1-204ENST00000447868 EFCAB5A4FU69 1503 aa40.95■■■■■ 4.15
UFD1-204ENST00000447868 ARID3CA6NKF2 412 aa40.85■■■■■ 4.13
UFD1-204ENST00000447868 RAPGEF6Q8TEU7 1601 aa40.84■■■■■ 4.13
UFD1-204ENST00000447868 TSPOAP1O95153 1857 aa40.77■■■■■ 4.12
UFD1-204ENST00000447868 ARHGAP35Q9NRY4 1499 aa40.76■■■■■ 4.12
UFD1-204ENST00000447868 WDR7Q9Y4E6 1490 aa40.76■■■■■ 4.12
UFD1-204ENST00000447868 EPRSP07814 1512 aaKnown RBP40.75■■■■■ 4.11
UFD1-204ENST00000447868 GLI2P10070 1586 aa40.74■■■■■ 4.11
UFD1-204ENST00000447868 ATP10BO94823 1461 aa40.73■■■■■ 4.11
UFD1-204ENST00000447868 NUP153P49790 1475 aaKnown RBP40.68■■■■■ 4.1
UFD1-204ENST00000447868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.64■■■■■ 4.1
UFD1-204ENST00000447868 HNRNPUL2Q1KMD3 747 aaKnown RBP40.64■■■■■ 4.1
UFD1-204ENST00000447868 KCNH8Q96L42 1107 aa40.64■■■■■ 4.1
UFD1-204ENST00000447868 FMN1Q68DA7 1419 aa40.58■■■■■ 4.09
UFD1-204ENST00000447868 MAP3K4Q9Y6R4 1608 aa40.57■■■■■ 4.09
UFD1-204ENST00000447868 PPRC1Q5VV67 1664 aaKnown RBP40.54■■■■■ 4.08
UFD1-204ENST00000447868 ATP1B4Q9UN42 357 aaPredicted RBP40.51■■■■■ 4.08
UFD1-204ENST00000447868 CLIP1P30622 1438 aa40.47■■■■■ 4.07
UFD1-204ENST00000447868 CFAP43Q8NDM7 1665 aa40.43■■■■■ 4.06
UFD1-204ENST00000447868 HECW1Q76N89 1606 aa40.43■■■■■ 4.06
UFD1-204ENST00000447868 KDM6BO15054 1643 aa40.42■■■■■ 4.06
UFD1-204ENST00000447868 CDK13Q14004 1512 aaKnown RBP40.42■■■■■ 4.06
UFD1-204ENST00000447868 CD109Q6YHK3 1445 aa40.42■■■■■ 4.06
UFD1-204ENST00000447868 TEX14Q8IWB6 1497 aa40.39■■■■■ 4.06
UFD1-204ENST00000447868 PLEKHD1A6NEE1 506 aa40.38■■■■■ 4.05
UFD1-204ENST00000447868 LOC105371045A0A1W2PR82 267 aa40.35■■■■■ 4.05
UFD1-204ENST00000447868 ABCA9Q8IUA7 1624 aa40.31■■■■■ 4.04
UFD1-204ENST00000447868 MAGI3Q5TCQ9 1506 aa40.3■■■■■ 4.04
UFD1-204ENST00000447868 PCF11O94913 1555 aaKnown RBP40.3■■■■■ 4.04
UFD1-204ENST00000447868 CEP162Q5TB80 1403 aa40.25■■■■■ 4.03
UFD1-204ENST00000447868 CASKIN1Q8WXD9 1431 aa40.25■■■■■ 4.03
UFD1-204ENST00000447868 LRRIQ1Q96JM4 1722 aa40.25■■■■■ 4.03
UFD1-204ENST00000447868 COL17A1Q9UMD9 1497 aaPredicted RBP40.18■■■■■ 4.02
UFD1-204ENST00000447868 CDK11AQ9UQ88 783 aaPredicted RBP40.16■■■■■ 4.02
UFD1-204ENST00000447868 FYCO1Q9BQS8 1478 aa40.15■■■■■ 4.02
UFD1-204ENST00000447868 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.12■■■■■ 4.01
UFD1-204ENST00000447868 CCDC18Q5T9S5 1454 aa40.11■■■■■ 4.01
UFD1-204ENST00000447868 TTC37Q6PGP7 1564 aa40.09■■■■■ 4.01
UFD1-204ENST00000447868 TROQ12816 1431 aaPredicted RBP40.04■■■■■ 4
UFD1-204ENST00000447868 KIF14Q15058 1648 aa40■■■■□ 3.99
UFD1-204ENST00000447868 NEO1Q92859 1461 aa39.98■■■■□ 3.99
UFD1-204ENST00000447868 PHLDB1Q86UU1 1377 aa39.96■■■■□ 3.99
UFD1-204ENST00000447868 ARAP3Q8WWN8 1544 aa39.96■■■■□ 3.99
UFD1-204ENST00000447868 FANCAO15360 1455 aa39.91■■■■□ 3.98
UFD1-204ENST00000447868 PLCH2O75038 1416 aa39.87■■■■□ 3.97
UFD1-204ENST00000447868 CFAP74Q9C0B2 1584 aa39.87■■■■□ 3.97
UFD1-204ENST00000447868 MYO5CQ9NQX4 1742 aa39.87■■■■□ 3.97
UFD1-204ENST00000447868 AKNAQ7Z591 1439 aa39.84■■■■□ 3.97
UFD1-204ENST00000447868 RAPGEF3O95398 923 aa39.82■■■■□ 3.97
UFD1-204ENST00000447868 VPS8Q8N3P4 1428 aa39.76■■■■□ 3.96
UFD1-204ENST00000447868 EFCAB2Q5VUJ9 269 aa39.74■■■■□ 3.95
UFD1-204ENST00000447868 FRMPD1Q5SYB0 1578 aa39.73■■■■□ 3.95
UFD1-204ENST00000447868 ARHGAP5Q13017 1502 aa39.73■■■■□ 3.95
UFD1-204ENST00000447868 DENND4BO75064 1496 aaPredicted RBP39.73■■■■□ 3.95
UFD1-204ENST00000447868 MTUS2Q5JR59 1369 aa39.72■■■■□ 3.95
UFD1-204ENST00000447868 ADGRL1O94910 1474 aa39.7■■■■□ 3.95
UFD1-204ENST00000447868 CDC42BPBQ9Y5S2 1711 aa39.68■■■■□ 3.94
UFD1-204ENST00000447868 AEBP2Q6ZN18 517 aaPredicted RBP39.67■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms