RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 ERCC6L2Q5T890 1561 aa34.44■■■■□ 3.1
PTX4-203ENST00000447419 JPH4Q96JJ6 628 aa34.4■■■■□ 3.1
PTX4-203ENST00000447419 RAPGEF2Q9Y4G8 1499 aa34.39■■■■□ 3.1
PTX4-203ENST00000447419 PRG4Q92954 1404 aaPredicted RBP34.34■■■■□ 3.09
PTX4-203ENST00000447419 KIAA0586Q9BVV6 1533 aa34.34■■■■□ 3.09
PTX4-203ENST00000447419 SHROOM2Q13796 1616 aa34.33■■■■□ 3.09
PTX4-203ENST00000447419 CSRNP3Q8WYN3 585 aa34.32■■■■□ 3.08
PTX4-203ENST00000447419 PRXQ9BXM0 1461 aa34.27■■■■□ 3.08
PTX4-203ENST00000447419 EEA1Q15075 1411 aa34.19■■■■□ 3.06
PTX4-203ENST00000447419 EHMT2Q96KQ7 1210 aa34.16■■■■□ 3.06
PTX4-203ENST00000447419 IQGAP2Q13576 1575 aa34.16■■■■□ 3.06
PTX4-203ENST00000447419 TTBK1Q5TCY1 1321 aaPredicted RBP34.15■■■■□ 3.06
PTX4-203ENST00000447419 CTTNBP2Q8WZ74 1663 aa33.98■■■■□ 3.03
PTX4-203ENST00000447419 CARMIL2Q6F5E8 1435 aa33.98■■■■□ 3.03
PTX4-203ENST00000447419 DISP1Q96F81 1524 aa33.96■■■■□ 3.03
PTX4-203ENST00000447419 RANGAP1P46060 587 aaPredicted RBP33.95■■■■□ 3.03
PTX4-203ENST00000447419 UGGT2Q9NYU1 1516 aa33.94■■■■□ 3.02
PTX4-203ENST00000447419 PTPRGP23470 1445 aa33.91■■■■□ 3.02
PTX4-203ENST00000447419 TNIKQ9UKE5 1360 aa33.89■■■■□ 3.02
PTX4-203ENST00000447419 TRHP20396 242 aaPredicted RBP33.88■■■■□ 3.01
PTX4-203ENST00000447419 KIF21BO75037 1637 aa33.88■■■■□ 3.01
PTX4-203ENST00000447419 P3H3Q8IVL6 736 aa33.84■■■■□ 3.01
PTX4-203ENST00000447419 KIAA0556O60303 1618 aa33.84■■■■□ 3.01
PTX4-203ENST00000447419 UBTFP17480 764 aaKnown RBP33.81■■■■□ 3
PTX4-203ENST00000447419 ADCY10Q96PN6 1610 aa33.76■■■■□ 3
PTX4-203ENST00000447419 GOLGA3Q08378 1498 aa33.74■■■□□ 2.99
PTX4-203ENST00000447419 NPM1P06748 294 aaKnown RBP eCLIP33.69■■■□□ 2.98
PTX4-203ENST00000447419 UACAQ9BZF9 1416 aa33.65■■■□□ 2.98
PTX4-203ENST00000447419 PLB1Q6P1J6 1458 aa33.62■■■□□ 2.97
PTX4-203ENST00000447419 SAMD9Q5K651 1589 aa33.58■■■□□ 2.97
PTX4-203ENST00000447419 FHOD3Q2V2M9 1422 aa33.57■■■□□ 2.96
PTX4-203ENST00000447419 ABCC2Q92887 1545 aa33.56■■■□□ 2.96
PTX4-203ENST00000447419 ARID3CA6NKF2 412 aa33.53■■■□□ 2.96
PTX4-203ENST00000447419 UHRF1BP1LA0JNW5 1464 aa33.53■■■□□ 2.96
PTX4-203ENST00000447419 ABCA8O94911 1581 aa33.46■■■□□ 2.95
PTX4-203ENST00000447419 MAPKBP1O60336 1514 aa33.45■■■□□ 2.95
PTX4-203ENST00000447419 FAM69CQ0P6D2 419 aa33.43■■■□□ 2.94
PTX4-203ENST00000447419 KDM5BQ9UGL1 1544 aa33.41■■■□□ 2.94
PTX4-203ENST00000447419 EFCAB5A4FU69 1503 aa33.41■■■□□ 2.94
PTX4-203ENST00000447419 ASXL2Q76L83 1435 aa33.4■■■□□ 2.94
PTX4-203ENST00000447419 ZCCHC11Q5TAX3 1644 aaKnown RBP33.38■■■□□ 2.93
PTX4-203ENST00000447419 ARHGAP35Q9NRY4 1499 aa33.37■■■□□ 2.93
PTX4-203ENST00000447419 ABCC10Q5T3U5 1492 aa33.37■■■□□ 2.93
PTX4-203ENST00000447419 LOC105371045A0A1W2PR82 267 aa33.33■■■□□ 2.93
PTX4-203ENST00000447419 DIP2BQ9P265 1576 aa33.31■■■□□ 2.92
PTX4-203ENST00000447419 KIF13AQ9H1H9 1805 aa33.31■■■□□ 2.92
PTX4-203ENST00000447419 RAPGEF6Q8TEU7 1601 aa33.29■■■□□ 2.92
PTX4-203ENST00000447419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.27■■■□□ 2.92
PTX4-203ENST00000447419 HNRNPUL2Q1KMD3 747 aaKnown RBP33.27■■■□□ 2.92
PTX4-203ENST00000447419 ATP10BO94823 1461 aa33.25■■■□□ 2.91
PTX4-203ENST00000447419 ATP1B4Q9UN42 357 aaPredicted RBP33.25■■■□□ 2.91
PTX4-203ENST00000447419 NUP153P49790 1475 aaKnown RBP33.23■■■□□ 2.91
PTX4-203ENST00000447419 KCNH8Q96L42 1107 aa33.23■■■□□ 2.91
PTX4-203ENST00000447419 CLIP1P30622 1438 aa33.2■■■□□ 2.91
PTX4-203ENST00000447419 WDR7Q9Y4E6 1490 aa33.19■■■□□ 2.9
PTX4-203ENST00000447419 EPRSP07814 1512 aaKnown RBP33.17■■■□□ 2.9
PTX4-203ENST00000447419 FMN1Q68DA7 1419 aa33.15■■■□□ 2.9
PTX4-203ENST00000447419 TSPOAP1O95153 1857 aa33.08■■■□□ 2.89
PTX4-203ENST00000447419 CDK13Q14004 1512 aaKnown RBP33.08■■■□□ 2.89
PTX4-203ENST00000447419 CEP162Q5TB80 1403 aa33.06■■■□□ 2.88
PTX4-203ENST00000447419 GLI2P10070 1586 aa33.04■■■□□ 2.88
PTX4-203ENST00000447419 HECW1Q76N89 1606 aa32.98■■■□□ 2.87
PTX4-203ENST00000447419 PLEKHD1A6NEE1 506 aa32.97■■■□□ 2.87
PTX4-203ENST00000447419 PCF11O94913 1555 aaKnown RBP32.97■■■□□ 2.87
PTX4-203ENST00000447419 MAP3K4Q9Y6R4 1608 aa32.94■■■□□ 2.86
PTX4-203ENST00000447419 CD109Q6YHK3 1445 aa32.92■■■□□ 2.86
PTX4-203ENST00000447419 PPRC1Q5VV67 1664 aaKnown RBP32.92■■■□□ 2.86
PTX4-203ENST00000447419 CASKIN1Q8WXD9 1431 aa32.91■■■□□ 2.86
PTX4-203ENST00000447419 LRRIQ1Q96JM4 1722 aa32.85■■■□□ 2.85
PTX4-203ENST00000447419 FYCO1Q9BQS8 1478 aa32.82■■■□□ 2.84
PTX4-203ENST00000447419 CFAP43Q8NDM7 1665 aa32.81■■■□□ 2.84
PTX4-203ENST00000447419 KDM6BO15054 1643 aa32.79■■■□□ 2.84
PTX4-203ENST00000447419 CDK11AQ9UQ88 783 aaPredicted RBP32.78■■■□□ 2.84
PTX4-203ENST00000447419 TEX14Q8IWB6 1497 aa32.78■■■□□ 2.84
PTX4-203ENST00000447419 ABCA9Q8IUA7 1624 aa32.77■■■□□ 2.84
PTX4-203ENST00000447419 MAGI3Q5TCQ9 1506 aa32.75■■■□□ 2.83
PTX4-203ENST00000447419 COL17A1Q9UMD9 1497 aaPredicted RBP32.74■■■□□ 2.83
PTX4-203ENST00000447419 CCDC18Q5T9S5 1454 aa32.73■■■□□ 2.83
PTX4-203ENST00000447419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.73■■■□□ 2.83
PTX4-203ENST00000447419 TTC37Q6PGP7 1564 aa32.71■■■□□ 2.83
PTX4-203ENST00000447419 TROQ12816 1431 aaPredicted RBP32.7■■■□□ 2.82
PTX4-203ENST00000447419 KIF14Q15058 1648 aa32.67■■■□□ 2.82
PTX4-203ENST00000447419 VPS8Q8N3P4 1428 aa32.61■■■□□ 2.81
PTX4-203ENST00000447419 FANCAO15360 1455 aa32.54■■■□□ 2.8
PTX4-203ENST00000447419 RAPGEF3O95398 923 aa32.52■■■□□ 2.8
PTX4-203ENST00000447419 MTUS2Q5JR59 1369 aa32.52■■■□□ 2.8
PTX4-203ENST00000447419 PLCH2O75038 1416 aa32.51■■■□□ 2.79
PTX4-203ENST00000447419 NEO1Q92859 1461 aa32.51■■■□□ 2.79
PTX4-203ENST00000447419 AKNAQ7Z591 1439 aa32.48■■■□□ 2.79
PTX4-203ENST00000447419 ARAP3Q8WWN8 1544 aa32.46■■■□□ 2.79
PTX4-203ENST00000447419 ARHGAP5Q13017 1502 aa32.43■■■□□ 2.78
PTX4-203ENST00000447419 MYO5CQ9NQX4 1742 aa32.43■■■□□ 2.78
PTX4-203ENST00000447419 PHLDB1Q86UU1 1377 aa32.43■■■□□ 2.78
PTX4-203ENST00000447419 EFCAB2Q5VUJ9 269 aa32.42■■■□□ 2.78
PTX4-203ENST00000447419 TIAM1Q13009 1591 aa32.39■■■□□ 2.78
PTX4-203ENST00000447419 ADGRL1O94910 1474 aa32.37■■■□□ 2.77
PTX4-203ENST00000447419 CFAP74Q9C0B2 1584 aa32.37■■■□□ 2.77
PTX4-203ENST00000447419 KANK4Q5T7N3 995 aaPredicted RBP32.36■■■□□ 2.77
PTX4-203ENST00000447419 EHBP1L1Q8N3D4 1523 aa32.36■■■□□ 2.77
PTX4-203ENST00000447419 ZNF777Q9ULD5 760 aaPredicted RBP32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms