RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 KIF21AQ7Z4S6 1674 aa24.29■■□□□ 1.48
PIKFYVE-206ENST00000443896 ABCA5Q8WWZ7 1642 aa24.28■■□□□ 1.48
PIKFYVE-206ENST00000443896 TIAM1Q13009 1591 aa24.27■■□□□ 1.48
PIKFYVE-206ENST00000443896 FHAD1B1AJZ9 1412 aa24.25■■□□□ 1.47
PIKFYVE-206ENST00000443896 CTTNBP2Q8WZ74 1663 aa24.23■■□□□ 1.47
PIKFYVE-206ENST00000443896 EFCAB5A4FU69 1503 aa24.23■■□□□ 1.47
PIKFYVE-206ENST00000443896 GAPVD1Q14C86 1478 aa24.2■■□□□ 1.46
PIKFYVE-206ENST00000443896 TDRD9Q8NDG6 1382 aaKnown RBP24.19■■□□□ 1.46
PIKFYVE-206ENST00000443896 CCNB3Q8WWL7 1395 aa24.19■■□□□ 1.46
PIKFYVE-206ENST00000443896 PCF11O94913 1555 aaKnown RBP24.18■■□□□ 1.46
PIKFYVE-206ENST00000443896 LRRC9Q6ZRR7 1453 aa24.17■■□□□ 1.46
PIKFYVE-206ENST00000443896 CFAP43Q8NDM7 1665 aa24.16■■□□□ 1.46
PIKFYVE-206ENST00000443896 TARBP1Q13395 1621 aaKnown RBP24.15■■□□□ 1.46
PIKFYVE-206ENST00000443896 FHOD3Q2V2M9 1422 aa24.14■■□□□ 1.45
PIKFYVE-206ENST00000443896 AQRO60306 1485 aaKnown RBP eCLIP24.12■■□□□ 1.452e-6■□□□□ 9
PIKFYVE-206ENST00000443896 FYCO1Q9BQS8 1478 aa24.11■■□□□ 1.45
PIKFYVE-206ENST00000443896 P3H3Q8IVL6 736 aa24.11■■□□□ 1.45
PIKFYVE-206ENST00000443896 CLSPNQ9HAW4 1339 aa24.1■■□□□ 1.45
PIKFYVE-206ENST00000443896 CASKIN1Q8WXD9 1431 aa24.08■■□□□ 1.45
PIKFYVE-206ENST00000443896 DHX57Q6P158 1386 aaKnown RBP24.08■■□□□ 1.45
PIKFYVE-206ENST00000443896 DIEXFQ68CQ4 756 aaKnown RBP24.05■■□□□ 1.44
PIKFYVE-206ENST00000443896 MRC2Q9UBG0 1479 aa24.04■■□□□ 1.44
PIKFYVE-206ENST00000443896 SAMD9Q5K651 1589 aa24.04■■□□□ 1.44
PIKFYVE-206ENST00000443896 ZNF316A6NFI3 1004 aaPredicted RBP24.03■■□□□ 1.44
PIKFYVE-206ENST00000443896 FMN1Q68DA7 1419 aa24.03■■□□□ 1.44
PIKFYVE-206ENST00000443896 PHLDB1Q86UU1 1377 aa24.02■■□□□ 1.44
PIKFYVE-206ENST00000443896 PBRM1Q86U86 1689 aa23.99■■□□□ 1.43
PIKFYVE-206ENST00000443896 SNAPC4Q5SXM2 1469 aa23.99■■□□□ 1.43
PIKFYVE-206ENST00000443896 CENPBP07199 599 aaPredicted RBP23.97■■□□□ 1.43
PIKFYVE-206ENST00000443896 YTHDC1Q96MU7 727 aaKnown RBP23.97■■□□□ 1.43
PIKFYVE-206ENST00000443896 ATP1B4Q9UN42 357 aaPredicted RBP23.95■■□□□ 1.42
PIKFYVE-206ENST00000443896 ADAMTS12P58397 1594 aa23.91■■□□□ 1.42
PIKFYVE-206ENST00000443896 ITGAEP38570 1179 aa23.91■■□□□ 1.42
PIKFYVE-206ENST00000443896 WDR62O43379 1518 aa23.89■■□□□ 1.42
PIKFYVE-206ENST00000443896 THOC2Q8NI27 1593 aaKnown RBP23.87■■□□□ 1.41
PIKFYVE-206ENST00000443896 GRIN2BQ13224 1484 aa23.87■■□□□ 1.41
PIKFYVE-206ENST00000443896 RAB3GAP2Q9H2M9 1393 aa23.87■■□□□ 1.41
PIKFYVE-206ENST00000443896 IFT140Q96RY7 1462 aa23.87■■□□□ 1.41
PIKFYVE-206ENST00000443896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.86■■□□□ 1.41
PIKFYVE-206ENST00000443896 LRRIQ1Q96JM4 1722 aa23.85■■□□□ 1.41
PIKFYVE-206ENST00000443896 SETD5Q9C0A6 1442 aa23.84■■□□□ 1.41
PIKFYVE-206ENST00000443896 FAM50AQ14320 339 aaKnown RBP23.82■■□□□ 1.4
PIKFYVE-206ENST00000443896 IQGAP2Q13576 1575 aa23.82■■□□□ 1.4
PIKFYVE-206ENST00000443896 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
PIKFYVE-206ENST00000443896 MTUS2Q5JR59 1369 aa23.78■■□□□ 1.4
PIKFYVE-206ENST00000443896 FGD6Q6ZV73 1430 aa23.76■■□□□ 1.39
PIKFYVE-206ENST00000443896 MAPKBP1O60336 1514 aa23.75■■□□□ 1.39
PIKFYVE-206ENST00000443896 EHBP1L1Q8N3D4 1523 aa23.73■■□□□ 1.39
PIKFYVE-206ENST00000443896 CCDC18Q5T9S5 1454 aa23.71■■□□□ 1.39
PIKFYVE-206ENST00000443896 UGGT2Q9NYU1 1516 aa23.71■■□□□ 1.39
PIKFYVE-206ENST00000443896 NCOA2Q15596 1464 aa23.7■■□□□ 1.38
PIKFYVE-206ENST00000443896 SUPT6HQ7KZ85 1726 aaKnown RBP23.7■■□□□ 1.38
PIKFYVE-206ENST00000443896 BCL11AQ9H165 835 aa23.69■■□□□ 1.38
PIKFYVE-206ENST00000443896 HECW1Q76N89 1606 aa23.69■■□□□ 1.38
PIKFYVE-206ENST00000443896 EIF4G3O43432 1585 aaKnown RBP23.68■■□□□ 1.38
PIKFYVE-206ENST00000443896 ERCC6Q03468 1493 aa23.67■■□□□ 1.38
PIKFYVE-206ENST00000443896 MYOM3Q5VTT5 1437 aa23.67■■□□□ 1.38
PIKFYVE-206ENST00000443896 ARHGEF11O15085 1522 aa23.66■■□□□ 1.38
PIKFYVE-206ENST00000443896 MAGI3Q5TCQ9 1506 aa23.65■■□□□ 1.38
PIKFYVE-206ENST00000443896 KIAA0586Q9BVV6 1533 aa23.64■■□□□ 1.37
PIKFYVE-206ENST00000443896 EPRSP07814 1512 aaKnown RBP23.61■■□□□ 1.37
PIKFYVE-206ENST00000443896 GRIN2AQ12879 1464 aa23.61■■□□□ 1.37
PIKFYVE-206ENST00000443896 PTPRKQ15262 1439 aa23.58■■□□□ 1.36
PIKFYVE-206ENST00000443896 KIAA0556O60303 1618 aa23.57■■□□□ 1.36
PIKFYVE-206ENST00000443896 MAGI1Q96QZ7 1491 aaPredicted RBP23.57■■□□□ 1.36
PIKFYVE-206ENST00000443896 DISP1Q96F81 1524 aa23.57■■□□□ 1.36
PIKFYVE-206ENST00000443896 HFM1A2PYH4 1435 aa23.56■■□□□ 1.36
PIKFYVE-206ENST00000443896 MIER1Q8N108 512 aa23.56■■□□□ 1.36
PIKFYVE-206ENST00000443896 PTPN23Q9H3S7 1636 aa23.56■■□□□ 1.36
PIKFYVE-206ENST00000443896 CDK13Q14004 1512 aaKnown RBP23.53■■□□□ 1.36
PIKFYVE-206ENST00000443896 TCOF1Q13428 1488 aaKnown RBP23.52■■□□□ 1.36
PIKFYVE-206ENST00000443896 SYNJ2O15056 1496 aa23.49■■□□□ 1.35
PIKFYVE-206ENST00000443896 NAIPQ13075 1403 aa23.48■■□□□ 1.35
PIKFYVE-206ENST00000443896 TIMELESSQ9UNS1 1208 aa23.47■■□□□ 1.35
PIKFYVE-206ENST00000443896 SIN3AQ96ST3 1273 aa23.46■■□□□ 1.35
PIKFYVE-206ENST00000443896 CEP170Q5SW79 1584 aa23.45■■□□□ 1.35
PIKFYVE-206ENST00000443896 MIA2Q96PC5 1412 aa23.45■■□□□ 1.34
PIKFYVE-206ENST00000443896 UACAQ9BZF9 1416 aa23.45■■□□□ 1.34
PIKFYVE-206ENST00000443896 RAPGEF6Q8TEU7 1601 aa23.44■■□□□ 1.34
PIKFYVE-206ENST00000443896 NUP153P49790 1475 aaKnown RBP23.43■■□□□ 1.34
PIKFYVE-206ENST00000443896 CHMP7Q8WUX9 453 aaPredicted RBP23.42■■□□□ 1.34
PIKFYVE-206ENST00000443896 NUP160Q12769 1436 aa23.39■■□□□ 1.33
PIKFYVE-206ENST00000443896 AKNAQ7Z591 1439 aa23.38■■□□□ 1.33
PIKFYVE-206ENST00000443896 GCC2Q8IWJ2 1684 aa23.37■■□□□ 1.33
PIKFYVE-206ENST00000443896 ARID3CA6NKF2 412 aa23.36■■□□□ 1.33
PIKFYVE-206ENST00000443896 PPP1R15AO75807 674 aaPredicted RBP23.3■■□□□ 1.32
PIKFYVE-206ENST00000443896 FBLN2P98095 1184 aa23.3■■□□□ 1.32
PIKFYVE-206ENST00000443896 CDK11AQ9UQ88 783 aaPredicted RBP23.3■■□□□ 1.32
PIKFYVE-206ENST00000443896 CARMIL2Q6F5E8 1435 aa23.29■■□□□ 1.32
PIKFYVE-206ENST00000443896 RRP7BPQ9NSQ0 103 aa23.28■■□□□ 1.32
PIKFYVE-206ENST00000443896 PLB1Q6P1J6 1458 aa23.27■■□□□ 1.32
PIKFYVE-206ENST00000443896 JPH4Q96JJ6 628 aa23.27■■□□□ 1.32
PIKFYVE-206ENST00000443896 CHIC2Q9UKJ5 165 aa23.27■■□□□ 1.32
PIKFYVE-206ENST00000443896 TROQ12816 1431 aaPredicted RBP23.25■■□□□ 1.31
PIKFYVE-206ENST00000443896 TONSLQ96HA7 1378 aa23.24■■□□□ 1.31
PIKFYVE-206ENST00000443896 DNMT1P26358 1616 aaKnown RBP23.24■■□□□ 1.31
PIKFYVE-206ENST00000443896 DAPK1P53355 1430 aa23.23■■□□□ 1.31
PIKFYVE-206ENST00000443896 KDM6BO15054 1643 aa23.23■■□□□ 1.31
PIKFYVE-206ENST00000443896 ANP32EQ9BTT0 268 aa23.23■■□□□ 1.31
PIKFYVE-206ENST00000443896 ROCK1Q13464 1354 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms