RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 NISCHQ9Y2I1 1504 aa34.83■■■■□ 3.17
PIKFYVE-206ENST00000443896 CCDC180Q9P1Z9 1646 aa29.93■■■□□ 2.38
PIKFYVE-206ENST00000443896 ZCCHC6Q5VYS8 1495 aaKnown RBP29.42■■■□□ 2.3
PIKFYVE-206ENST00000443896 SHROOM4Q9ULL8 1493 aa29.08■■■□□ 2.25
PIKFYVE-206ENST00000443896 DCAF1Q9Y4B6 1507 aa28.74■■■□□ 2.19
PIKFYVE-206ENST00000443896 DCAF8L2P0C7V8 631 aa28.61■■■□□ 2.17
PIKFYVE-206ENST00000443896 SUPT5HO00267 1087 aaKnown RBP28.34■■■□□ 2.13
PIKFYVE-206ENST00000443896 MYO15BQ96JP2 1530 aa28.1■■■□□ 2.09
PIKFYVE-206ENST00000443896 SCRIBQ14160 1630 aa27.75■■■□□ 2.03
PIKFYVE-206ENST00000443896 ABCC9O60706 1549 aa27.75■■■□□ 2.03
PIKFYVE-206ENST00000443896 NACADO15069 1562 aa27.72■■■□□ 2.03
PIKFYVE-206ENST00000443896 CHIC1Q5VXU3 224 aa27.51■■□□□ 1.99
PIKFYVE-206ENST00000443896 RSF1Q96T23 1441 aaPredicted RBP27.36■■□□□ 1.97
PIKFYVE-206ENST00000443896 RB1CC1Q8TDY2 1594 aa27.3■■□□□ 1.96
PIKFYVE-206ENST00000443896 CECR2Q9BXF3 1484 aa27.07■■□□□ 1.92
PIKFYVE-206ENST00000443896 MROH2BQ7Z745 1585 aa26.98■■□□□ 1.91
PIKFYVE-206ENST00000443896 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
PIKFYVE-206ENST00000443896 WIZO95785 1651 aa26.81■■□□□ 1.88
PIKFYVE-206ENST00000443896 BAZ1AQ9NRL2 1556 aaPredicted RBP26.81■■□□□ 1.88
PIKFYVE-206ENST00000443896 SMARCA4P51532 1647 aa26.61■■□□□ 1.85
PIKFYVE-206ENST00000443896 LOC105371045A0A1W2PR82 267 aa26.55■■□□□ 1.84
PIKFYVE-206ENST00000443896 BICRAQ9NZM4 1560 aa26.54■■□□□ 1.84
PIKFYVE-206ENST00000443896 TRIM41Q8WV44 630 aa26.54■■□□□ 1.84
PIKFYVE-206ENST00000443896 TOP2AP11388 1531 aaKnown RBP26.49■■□□□ 1.83
PIKFYVE-206ENST00000443896 EIF4G1Q04637 1599 aaKnown RBP26.41■■□□□ 1.82
PIKFYVE-206ENST00000443896 PABPN1Q86U42 306 aaKnown RBP eCLIP26.36■■□□□ 1.81
PIKFYVE-206ENST00000443896 SMARCA2P51531 1590 aa26.3■■□□□ 1.8
PIKFYVE-206ENST00000443896 CCDC88BA6NC98 1476 aa26.28■■□□□ 1.8
PIKFYVE-206ENST00000443896 PPARGC1BQ86YN6 1023 aaKnown RBP26.24■■□□□ 1.79
PIKFYVE-206ENST00000443896 HRCP23327 699 aa26.23■■□□□ 1.79
PIKFYVE-206ENST00000443896 PEG3Q9GZU2 1588 aa26.23■■□□□ 1.79
PIKFYVE-206ENST00000443896 FAM9AQ8IZU1 332 aaPredicted RBP26.14■■□□□ 1.78
PIKFYVE-206ENST00000443896 PCGF6Q9BYE7 350 aa26.13■■□□□ 1.77
PIKFYVE-206ENST00000443896 ABCC8Q09428 1581 aa26.01■■□□□ 1.75
PIKFYVE-206ENST00000443896 ATAD2BQ9ULI0 1458 aa26■■□□□ 1.75
PIKFYVE-206ENST00000443896 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
PIKFYVE-206ENST00000443896 TRIM26Q12899 539 aaPredicted RBP25.88■■□□□ 1.73
PIKFYVE-206ENST00000443896 EHMT2Q96KQ7 1210 aa25.8■■□□□ 1.72
PIKFYVE-206ENST00000443896 PELP1Q8IZL8 1130 aaKnown RBP25.71■■□□□ 1.71
PIKFYVE-206ENST00000443896 WRNQ14191 1432 aaPredicted RBP eCLIP25.7■■□□□ 1.71
PIKFYVE-206ENST00000443896 SOGA1O94964 1423 aa25.69■■□□□ 1.7
PIKFYVE-206ENST00000443896 EEA1Q15075 1411 aa25.69■■□□□ 1.7
PIKFYVE-206ENST00000443896 HMGXB3Q12766 1538 aa25.62■■□□□ 1.69
PIKFYVE-206ENST00000443896 NCAPD3P42695 1498 aa25.61■■□□□ 1.69
PIKFYVE-206ENST00000443896 SYNJ1O43426 1573 aa25.59■■□□□ 1.69
PIKFYVE-206ENST00000443896 RUSC2Q8N2Y8 1516 aa25.56■■□□□ 1.68
PIKFYVE-206ENST00000443896 CSRNP3Q8WYN3 585 aa25.54■■□□□ 1.68
PIKFYVE-206ENST00000443896 TNIKQ9UKE5 1360 aa25.49■■□□□ 1.67
PIKFYVE-206ENST00000443896 CEP162Q5TB80 1403 aa25.44■■□□□ 1.66
PIKFYVE-206ENST00000443896 GOLGA3Q08378 1498 aa25.41■■□□□ 1.66
PIKFYVE-206ENST00000443896 TOP2BQ02880 1626 aa25.39■■□□□ 1.66
PIKFYVE-206ENST00000443896 KIF21BO75037 1637 aa25.34■■□□□ 1.65
PIKFYVE-206ENST00000443896 BIVM-ERCC5R4GMW8 1640 aa25.33■■□□□ 1.65
PIKFYVE-206ENST00000443896 SCAF1Q9H7N4 1312 aaKnown RBP25.32■■□□□ 1.64
PIKFYVE-206ENST00000443896 CEP164Q9UPV0 1460 aa25.32■■□□□ 1.64
PIKFYVE-206ENST00000443896 UBTFP17480 764 aaKnown RBP25.29■■□□□ 1.64
PIKFYVE-206ENST00000443896 CFTRP13569 1480 aa25.28■■□□□ 1.64
PIKFYVE-206ENST00000443896 ZEB1P37275 1124 aaPredicted RBP25.2■■□□□ 1.62
PIKFYVE-206ENST00000443896 CUX1P39880 1505 aa25.17■■□□□ 1.62
PIKFYVE-206ENST00000443896 PRDM2Q13029 1718 aa25.14■■□□□ 1.62
PIKFYVE-206ENST00000443896 RAPGEF2Q9Y4G8 1499 aa25.12■■□□□ 1.61
PIKFYVE-206ENST00000443896 CC2D2AQ9P2K1 1620 aa25.1■■□□□ 1.61
PIKFYVE-206ENST00000443896 CLIP1P30622 1438 aa25.05■■□□□ 1.6
PIKFYVE-206ENST00000443896 CADPSQ9ULU8 1353 aa25.03■■□□□ 1.6
PIKFYVE-206ENST00000443896 ERICH3Q5RHP9 1530 aa25.02■■□□□ 1.6
PIKFYVE-206ENST00000443896 PRXQ9BXM0 1461 aa25.02■■□□□ 1.6
PIKFYVE-206ENST00000443896 KIF27Q86VH2 1401 aa24.97■■□□□ 1.59
PIKFYVE-206ENST00000443896 VPS8Q8N3P4 1428 aa24.94■■□□□ 1.58
PIKFYVE-206ENST00000443896 TTBK1Q5TCY1 1321 aaPredicted RBP24.89■■□□□ 1.58
PIKFYVE-206ENST00000443896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.79■■□□□ 1.56
PIKFYVE-206ENST00000443896 FANCD2Q9BXW9 1451 aa24.77■■□□□ 1.56
PIKFYVE-206ENST00000443896 FGD5Q6ZNL6 1462 aa24.76■■□□□ 1.56
PIKFYVE-206ENST00000443896 CUX2O14529 1486 aa24.75■■□□□ 1.55
PIKFYVE-206ENST00000443896 CCER1Q8TC90 406 aaPredicted RBP24.74■■□□□ 1.55
PIKFYVE-206ENST00000443896 ARAP1Q96P48 1450 aa24.73■■□□□ 1.55
PIKFYVE-206ENST00000443896 RANGAP1P46060 587 aaPredicted RBP24.72■■□□□ 1.55
PIKFYVE-206ENST00000443896 IGF1RP08069 1367 aa24.7■■□□□ 1.55
PIKFYVE-206ENST00000443896 MYT1Q01538 1121 aa24.68■■□□□ 1.54
PIKFYVE-206ENST00000443896 APLP2Q06481 763 aa24.68■■□□□ 1.54
PIKFYVE-206ENST00000443896 DNMBPQ6XZF7 1577 aa24.66■■□□□ 1.54
PIKFYVE-206ENST00000443896 NESP48681 1621 aa24.63■■□□□ 1.53
PIKFYVE-206ENST00000443896 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
PIKFYVE-206ENST00000443896 TOPBP1Q92547 1522 aa24.59■■□□□ 1.53
PIKFYVE-206ENST00000443896 CARMIL1Q5VZK9 1371 aa24.58■■□□□ 1.53
PIKFYVE-206ENST00000443896 ARHGAP35Q9NRY4 1499 aa24.58■■□□□ 1.52
PIKFYVE-206ENST00000443896 ABCA10Q8WWZ4 1543 aa24.54■■□□□ 1.52
PIKFYVE-206ENST00000443896 POLA1P09884 1462 aaPredicted RBP24.54■■□□□ 1.52
PIKFYVE-206ENST00000443896 RAD54L2Q9Y4B4 1467 aa24.5■■□□□ 1.51
PIKFYVE-206ENST00000443896 NEUROD1Q13562 356 aa24.5■■□□□ 1.51
PIKFYVE-206ENST00000443896 GTF3C3Q9Y5Q9 886 aa24.46■■□□□ 1.51
PIKFYVE-206ENST00000443896 HNRNPUL2Q1KMD3 747 aaKnown RBP24.45■■□□□ 1.5
PIKFYVE-206ENST00000443896 URB2Q14146 1524 aaKnown RBP24.43■■□□□ 1.5
PIKFYVE-206ENST00000443896 KANK4Q5T7N3 995 aaPredicted RBP24.42■■□□□ 1.5
PIKFYVE-206ENST00000443896 PDS5BQ9NTI5 1447 aa24.39■■□□□ 1.5
PIKFYVE-206ENST00000443896 WDR97A6NE52 1622 aa24.39■■□□□ 1.49
PIKFYVE-206ENST00000443896 ACIN1Q9UKV3 1341 aaKnown RBP24.38■■□□□ 1.49
PIKFYVE-206ENST00000443896 CUL7Q14999 1698 aa24.38■■□□□ 1.49
PIKFYVE-206ENST00000443896 DNAJC5BQ9UF47 199 aa24.36■■□□□ 1.49
PIKFYVE-206ENST00000443896 MAP3K1Q13233 1512 aa24.33■■□□□ 1.48
PIKFYVE-206ENST00000443896 RRBP1Q9P2E9 1410 aaKnown RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms