RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 RIMBP3CA6NJZ7 1639 aa20.47■□□□□ 0.87
USP1-203ENST00000442679 RIMBP3BA6NNM3 1639 aa20.47■□□□□ 0.87
USP1-203ENST00000442679 RIMBP3Q9UFD9 1639 aa20.47■□□□□ 0.87
USP1-203ENST00000442679 JPH4Q96JJ6 628 aa20.46■□□□□ 0.87
USP1-203ENST00000442679 KIAA0586Q9BVV6 1533 aa20.45■□□□□ 0.86
USP1-203ENST00000442679 CYB5RLQ6IPT4 315 aa20.39■□□□□ 0.85
USP1-203ENST00000442679 SHROOM2Q13796 1616 aa20.38■□□□□ 0.85
USP1-203ENST00000442679 PRG4Q92954 1404 aaPredicted RBP20.38■□□□□ 0.85
USP1-203ENST00000442679 ARAP1Q96P48 1450 aa20.35■□□□□ 0.85
USP1-203ENST00000442679 ERCC6L2Q5T890 1561 aa20.34■□□□□ 0.85
USP1-203ENST00000442679 IQGAP2Q13576 1575 aa20.33■□□□□ 0.84
USP1-203ENST00000442679 EHMT2Q96KQ7 1210 aa20.29■□□□□ 0.84
USP1-203ENST00000442679 KIF21BO75037 1637 aa20.27■□□□□ 0.84
USP1-203ENST00000442679 CARMIL2Q6F5E8 1435 aa20.25■□□□□ 0.83
USP1-203ENST00000442679 CTTNBP2Q8WZ74 1663 aa20.24■□□□□ 0.83
USP1-203ENST00000442679 UBTFP17480 764 aaKnown RBP20.23■□□□□ 0.83
USP1-203ENST00000442679 UGGT2Q9NYU1 1516 aa20.22■□□□□ 0.83
USP1-203ENST00000442679 GOLGA3Q08378 1498 aa20.21■□□□□ 0.83
USP1-203ENST00000442679 DISP1Q96F81 1524 aa20.2■□□□□ 0.82
USP1-203ENST00000442679 TTBK1Q5TCY1 1321 aaPredicted RBP20.19■□□□□ 0.82
USP1-203ENST00000442679 TNIKQ9UKE5 1360 aa20.18■□□□□ 0.82
USP1-203ENST00000442679 PTPRGP23470 1445 aa20.17■□□□□ 0.82
USP1-203ENST00000442679 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
USP1-203ENST00000442679 KIAA0556O60303 1618 aa20.12■□□□□ 0.81
USP1-203ENST00000442679 P3H3Q8IVL6 736 aa20.11■□□□□ 0.81
USP1-203ENST00000442679 NPM1P06748 294 aaKnown RBP eCLIP20.03■□□□□ 0.8
USP1-203ENST00000442679 SAMD9Q5K651 1589 aa20.03■□□□□ 0.8
USP1-203ENST00000442679 UACAQ9BZF9 1416 aa20.02■□□□□ 0.79
USP1-203ENST00000442679 ADCY10Q96PN6 1610 aa19.99■□□□□ 0.79
USP1-203ENST00000442679 EFCAB5A4FU69 1503 aa19.98■□□□□ 0.79
USP1-203ENST00000442679 LOC105371045A0A1W2PR82 267 aa19.98■□□□□ 0.79
USP1-203ENST00000442679 FHOD3Q2V2M9 1422 aa19.97■□□□□ 0.79
USP1-203ENST00000442679 UHRF1BP1LA0JNW5 1464 aa19.97■□□□□ 0.79
USP1-203ENST00000442679 PLB1Q6P1J6 1458 aa19.95■□□□□ 0.78
USP1-203ENST00000442679 TRHP20396 242 aaPredicted RBP19.95■□□□□ 0.78
USP1-203ENST00000442679 ABCC2Q92887 1545 aa19.94■□□□□ 0.78
USP1-203ENST00000442679 ARHGAP35Q9NRY4 1499 aa19.92■□□□□ 0.78
USP1-203ENST00000442679 ABCA8O94911 1581 aa19.91■□□□□ 0.78
USP1-203ENST00000442679 CLIP1P30622 1438 aa19.87■□□□□ 0.77
USP1-203ENST00000442679 KDM5BQ9UGL1 1544 aa19.86■□□□□ 0.77
USP1-203ENST00000442679 ARID3CA6NKF2 412 aa19.84■□□□□ 0.77
USP1-203ENST00000442679 MAPKBP1O60336 1514 aa19.84■□□□□ 0.77
USP1-203ENST00000442679 FMN1Q68DA7 1419 aa19.83■□□□□ 0.76
USP1-203ENST00000442679 RAPGEF6Q8TEU7 1601 aa19.81■□□□□ 0.76
USP1-203ENST00000442679 CEP162Q5TB80 1403 aa19.81■□□□□ 0.76
USP1-203ENST00000442679 ASXL2Q76L83 1435 aa19.81■□□□□ 0.76
USP1-203ENST00000442679 ZCCHC11Q5TAX3 1644 aaKnown RBP19.8■□□□□ 0.76
USP1-203ENST00000442679 ATP1B4Q9UN42 357 aaPredicted RBP19.79■□□□□ 0.76
USP1-203ENST00000442679 ATP10BO94823 1461 aa19.79■□□□□ 0.76
USP1-203ENST00000442679 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.78■□□□□ 0.76
USP1-203ENST00000442679 FAM69CQ0P6D2 419 aa19.78■□□□□ 0.76
USP1-203ENST00000442679 HNRNPUL2Q1KMD3 747 aaKnown RBP19.78■□□□□ 0.76
USP1-203ENST00000442679 NUP153P49790 1475 aaKnown RBP19.77■□□□□ 0.76
USP1-203ENST00000442679 ABCC10Q5T3U5 1492 aa19.77■□□□□ 0.76
USP1-203ENST00000442679 KCNH8Q96L42 1107 aa19.71■□□□□ 0.75
USP1-203ENST00000442679 WDR7Q9Y4E6 1490 aa19.71■□□□□ 0.75
USP1-203ENST00000442679 DIP2BQ9P265 1576 aa19.7■□□□□ 0.74
USP1-203ENST00000442679 CASKIN1Q8WXD9 1431 aa19.68■□□□□ 0.74
USP1-203ENST00000442679 EPRSP07814 1512 aaKnown RBP19.68■□□□□ 0.74
USP1-203ENST00000442679 PLEKHD1A6NEE1 506 aa19.68■□□□□ 0.74
USP1-203ENST00000442679 HECW1Q76N89 1606 aa19.68■□□□□ 0.74
USP1-203ENST00000442679 KIF13AQ9H1H9 1805 aa19.66■□□□□ 0.74
USP1-203ENST00000442679 CDK13Q14004 1512 aaKnown RBP19.65■□□□□ 0.74
USP1-203ENST00000442679 PCF11O94913 1555 aaKnown RBP19.63■□□□□ 0.73
USP1-203ENST00000442679 GLI2P10070 1586 aa19.63■□□□□ 0.73
USP1-203ENST00000442679 FYCO1Q9BQS8 1478 aa19.63■□□□□ 0.73
USP1-203ENST00000442679 CDK11AQ9UQ88 783 aaPredicted RBP19.63■□□□□ 0.73
USP1-203ENST00000442679 CCDC18Q5T9S5 1454 aa19.58■□□□□ 0.72
USP1-203ENST00000442679 SENP3Q9H4L4 574 aaPredicted RBP19.57■□□□□ 0.72
USP1-203ENST00000442679 CD109Q6YHK3 1445 aa19.55■□□□□ 0.72
USP1-203ENST00000442679 VPS8Q8N3P4 1428 aa19.55■□□□□ 0.72
USP1-203ENST00000442679 LRRIQ1Q96JM4 1722 aa19.54■□□□□ 0.72
USP1-203ENST00000442679 MAP3K4Q9Y6R4 1608 aa19.52■□□□□ 0.72
USP1-203ENST00000442679 TSPOAP1O95153 1857 aa19.51■□□□□ 0.71
USP1-203ENST00000442679 TROQ12816 1431 aaPredicted RBP19.51■□□□□ 0.71
USP1-203ENST00000442679 CFAP43Q8NDM7 1665 aa19.49■□□□□ 0.71
USP1-203ENST00000442679 ABCA9Q8IUA7 1624 aa19.48■□□□□ 0.71
USP1-203ENST00000442679 MAGI3Q5TCQ9 1506 aa19.47■□□□□ 0.71
USP1-203ENST00000442679 TEX14Q8IWB6 1497 aa19.47■□□□□ 0.71
USP1-203ENST00000442679 PPRC1Q5VV67 1664 aaKnown RBP19.46■□□□□ 0.71
USP1-203ENST00000442679 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.46■□□□□ 0.711e-5■■■■□ 25.8
USP1-203ENST00000442679 MTUS2Q5JR59 1369 aa19.44■□□□□ 0.7
USP1-203ENST00000442679 TTC37Q6PGP7 1564 aa19.41■□□□□ 0.7
USP1-203ENST00000442679 KIF14Q15058 1648 aa19.41■□□□□ 0.7
USP1-203ENST00000442679 APLP2Q06481 763 aa19.4■□□□□ 0.7
USP1-203ENST00000442679 TIAM1Q13009 1591 aa19.37■□□□□ 0.69
USP1-203ENST00000442679 PLCH2O75038 1416 aa19.37■□□□□ 0.69
USP1-203ENST00000442679 PHLDB1Q86UU1 1377 aa19.36■□□□□ 0.69
USP1-203ENST00000442679 KDM6BO15054 1643 aa19.36■□□□□ 0.69
USP1-203ENST00000442679 EFCAB2Q5VUJ9 269 aa19.35■□□□□ 0.69
USP1-203ENST00000442679 MAP3K1Q13233 1512 aa19.35■□□□□ 0.69
USP1-203ENST00000442679 NEO1Q92859 1461 aa19.35■□□□□ 0.69
USP1-203ENST00000442679 COL17A1Q9UMD9 1497 aaPredicted RBP19.35■□□□□ 0.69
USP1-203ENST00000442679 EHBP1L1Q8N3D4 1523 aa19.34■□□□□ 0.69
USP1-203ENST00000442679 FANCAO15360 1455 aa19.34■□□□□ 0.69
USP1-203ENST00000442679 KANK4Q5T7N3 995 aaPredicted RBP19.33■□□□□ 0.68
USP1-203ENST00000442679 LRRC9Q6ZRR7 1453 aa19.32■□□□□ 0.68
USP1-203ENST00000442679 AKNAQ7Z591 1439 aa19.32■□□□□ 0.68
USP1-203ENST00000442679 CCNB3Q8WWL7 1395 aa19.31■□□□□ 0.68
USP1-203ENST00000442679 ARAP3Q8WWN8 1544 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms