RNA–Protein interactions for RNA: ENST00000442309.5

GCFC2-204, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5

Gene GCFC2, Length 642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-204ENST00000442309 PRG4Q92954 1404 aaPredicted RBP35.99■■■■□ 3.35
GCFC2-204ENST00000442309 JPH4Q96JJ6 628 aa35.98■■■■□ 3.35
GCFC2-204ENST00000442309 CARMIL1Q5VZK9 1371 aa35.88■■■■□ 3.33
GCFC2-204ENST00000442309 KIAA0586Q9BVV6 1533 aa35.84■■■■□ 3.33
GCFC2-204ENST00000442309 RAPGEF2Q9Y4G8 1499 aa35.59■■■■□ 3.29
GCFC2-204ENST00000442309 IQGAP2Q13576 1575 aa35.59■■■■□ 3.29
GCFC2-204ENST00000442309 ADCY10Q96PN6 1610 aa35.54■■■■□ 3.28
GCFC2-204ENST00000442309 TTBK1Q5TCY1 1321 aaPredicted RBP35.51■■■■□ 3.27
GCFC2-204ENST00000442309 NPM1P06748 294 aaKnown RBP eCLIP35.5■■■■□ 3.27
GCFC2-204ENST00000442309 CARMIL2Q6F5E8 1435 aa35.49■■■■□ 3.27
GCFC2-204ENST00000442309 PTPRGP23470 1445 aa35.47■■■■□ 3.27
GCFC2-204ENST00000442309 KIF13AQ9H1H9 1805 aa35.44■■■■□ 3.26
GCFC2-204ENST00000442309 TNIKQ9UKE5 1360 aa35.43■■■■□ 3.26
GCFC2-204ENST00000442309 MAPKBP1O60336 1514 aa35.38■■■■□ 3.25
GCFC2-204ENST00000442309 DISP1Q96F81 1524 aa35.37■■■■□ 3.25
GCFC2-204ENST00000442309 UGGT2Q9NYU1 1516 aa35.34■■■■□ 3.25
GCFC2-204ENST00000442309 CTTNBP2Q8WZ74 1663 aa35.31■■■■□ 3.24
GCFC2-204ENST00000442309 ABCC10Q5T3U5 1492 aa35.31■■■■□ 3.24
GCFC2-204ENST00000442309 FAM69CQ0P6D2 419 aa35.31■■■■□ 3.24
GCFC2-204ENST00000442309 PRXQ9BXM0 1461 aa35.29■■■■□ 3.24
GCFC2-204ENST00000442309 DIP2BQ9P265 1576 aa35.26■■■■□ 3.24
GCFC2-204ENST00000442309 KIAA0556O60303 1618 aa35.26■■■■□ 3.24
GCFC2-204ENST00000442309 ABCC2Q92887 1545 aa35.22■■■■□ 3.23
GCFC2-204ENST00000442309 UACAQ9BZF9 1416 aa35.2■■■■□ 3.23
GCFC2-204ENST00000442309 UHRF1BP1LA0JNW5 1464 aa35.17■■■■□ 3.22
GCFC2-204ENST00000442309 CSRNP3Q8WYN3 585 aa35.13■■■■□ 3.21
GCFC2-204ENST00000442309 GOLGA3Q08378 1498 aa35.09■■■■□ 3.21
GCFC2-204ENST00000442309 ASXL2Q76L83 1435 aa35.07■■■■□ 3.21
GCFC2-204ENST00000442309 TSPOAP1O95153 1857 aa35.07■■■■□ 3.2
GCFC2-204ENST00000442309 PLB1Q6P1J6 1458 aa35.03■■■■□ 3.2
GCFC2-204ENST00000442309 KDM5BQ9UGL1 1544 aa35.02■■■■□ 3.2
GCFC2-204ENST00000442309 EEA1Q15075 1411 aa35.02■■■■□ 3.2
GCFC2-204ENST00000442309 ZCCHC11Q5TAX3 1644 aaKnown RBP35■■■■□ 3.19
GCFC2-204ENST00000442309 FAM9AQ8IZU1 332 aaPredicted RBP34.99■■■■□ 3.19
GCFC2-204ENST00000442309 GLI2P10070 1586 aa34.91■■■■□ 3.18
GCFC2-204ENST00000442309 P3H3Q8IVL6 736 aa34.9■■■■□ 3.18
GCFC2-204ENST00000442309 ABCA8O94911 1581 aa34.9■■■■□ 3.18
GCFC2-204ENST00000442309 KDM6BO15054 1643 aa34.88■■■■□ 3.17
GCFC2-204ENST00000442309 EPRSP07814 1512 aaKnown RBP34.86■■■■□ 3.17
GCFC2-204ENST00000442309 CHIC1Q5VXU3 224 aa34.81■■■■□ 3.16
GCFC2-204ENST00000442309 PPRC1Q5VV67 1664 aaKnown RBP34.81■■■■□ 3.16
GCFC2-204ENST00000442309 SAMD9Q5K651 1589 aa34.8■■■■□ 3.16
GCFC2-204ENST00000442309 AEBP2Q6ZN18 517 aaPredicted RBP34.8■■■■□ 3.16
GCFC2-204ENST00000442309 WDR7Q9Y4E6 1490 aa34.79■■■■□ 3.16
GCFC2-204ENST00000442309 RANGAP1P46060 587 aaPredicted RBP34.79■■■■□ 3.16
GCFC2-204ENST00000442309 KIF21BO75037 1637 aa34.75■■■■□ 3.15
GCFC2-204ENST00000442309 MAP3K4Q9Y6R4 1608 aa34.75■■■■□ 3.15
GCFC2-204ENST00000442309 ARID3CA6NKF2 412 aa34.72■■■■□ 3.15
GCFC2-204ENST00000442309 KCNH8Q96L42 1107 aa34.66■■■■□ 3.14
GCFC2-204ENST00000442309 EHMT2Q96KQ7 1210 aa34.65■■■■□ 3.14
GCFC2-204ENST00000442309 TEX14Q8IWB6 1497 aa34.63■■■■□ 3.13
GCFC2-204ENST00000442309 FHOD3Q2V2M9 1422 aa34.63■■■■□ 3.13
GCFC2-204ENST00000442309 RAPGEF6Q8TEU7 1601 aa34.62■■■■□ 3.13
GCFC2-204ENST00000442309 ATP10BO94823 1461 aa34.61■■■■□ 3.13
GCFC2-204ENST00000442309 CFAP43Q8NDM7 1665 aa34.56■■■■□ 3.12
GCFC2-204ENST00000442309 CD109Q6YHK3 1445 aa34.55■■■■□ 3.12
GCFC2-204ENST00000442309 COL17A1Q9UMD9 1497 aaPredicted RBP34.54■■■■□ 3.12
GCFC2-204ENST00000442309 EFCAB5A4FU69 1503 aa34.52■■■■□ 3.12
GCFC2-204ENST00000442309 UBTFP17480 764 aaKnown RBP34.52■■■■□ 3.12
GCFC2-204ENST00000442309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.49■■■■□ 3.11
GCFC2-204ENST00000442309 HNRNPUL2Q1KMD3 747 aaKnown RBP34.49■■■■□ 3.11
GCFC2-204ENST00000442309 NUP153P49790 1475 aaKnown RBP34.48■■■■□ 3.11
GCFC2-204ENST00000442309 MAGI3Q5TCQ9 1506 aa34.47■■■■□ 3.11
GCFC2-204ENST00000442309 KDM4FA0A1W2PPD8 638 aa34.36■■■■□ 3.09
GCFC2-204ENST00000442309 ABCA9Q8IUA7 1624 aa34.36■■■■□ 3.09
GCFC2-204ENST00000442309 ARHGAP35Q9NRY4 1499 aa34.28■■■■□ 3.08
GCFC2-204ENST00000442309 PLEKHD1A6NEE1 506 aa34.26■■■■□ 3.08
GCFC2-204ENST00000442309 CDK13Q14004 1512 aaKnown RBP34.21■■■■□ 3.07
GCFC2-204ENST00000442309 FMN1Q68DA7 1419 aa34.21■■■■□ 3.07
GCFC2-204ENST00000442309 ATP1B4Q9UN42 357 aaPredicted RBP34.2■■■■□ 3.07
GCFC2-204ENST00000442309 ADGRL1O94910 1474 aa34.19■■■■□ 3.06
GCFC2-204ENST00000442309 ARAP3Q8WWN8 1544 aa34.19■■■■□ 3.06
GCFC2-204ENST00000442309 HECW1Q76N89 1606 aa34.15■■■■□ 3.06
GCFC2-204ENST00000442309 PHLDB1Q86UU1 1377 aa34.13■■■■□ 3.05
GCFC2-204ENST00000442309 NEO1Q92859 1461 aa34.13■■■■□ 3.05
GCFC2-204ENST00000442309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.1■■■■□ 3.05
GCFC2-204ENST00000442309 TTC37Q6PGP7 1564 aa34.07■■■■□ 3.05
GCFC2-204ENST00000442309 RAPGEF3O95398 923 aa34.05■■■■□ 3.04
GCFC2-204ENST00000442309 FANCAO15360 1455 aa33.99■■■■□ 3.03
GCFC2-204ENST00000442309 FRMPD1Q5SYB0 1578 aa33.98■■■■□ 3.03
GCFC2-204ENST00000442309 CFAP74Q9C0B2 1584 aa33.98■■■■□ 3.03
GCFC2-204ENST00000442309 LRRIQ1Q96JM4 1722 aa33.96■■■■□ 3.03
GCFC2-204ENST00000442309 CDK11AQ9UQ88 783 aaPredicted RBP33.96■■■■□ 3.03
GCFC2-204ENST00000442309 AKNAQ7Z591 1439 aa33.96■■■■□ 3.03
GCFC2-204ENST00000442309 PCF11O94913 1555 aaKnown RBP33.93■■■■□ 3.02
GCFC2-204ENST00000442309 DENND4BO75064 1496 aaPredicted RBP33.91■■■■□ 3.02
GCFC2-204ENST00000442309 KIF14Q15058 1648 aa33.9■■■■□ 3.02
GCFC2-204ENST00000442309 CLIP1P30622 1438 aa33.88■■■■□ 3.01
GCFC2-204ENST00000442309 RICTORQ6R327 1708 aa33.88■■■■□ 3.01
GCFC2-204ENST00000442309 TROQ12816 1431 aaPredicted RBP33.87■■■■□ 3.01
GCFC2-204ENST00000442309 CASKIN1Q8WXD9 1431 aa33.87■■■■□ 3.01
GCFC2-204ENST00000442309 PLCH2O75038 1416 aa33.87■■■■□ 3.01
GCFC2-204ENST00000442309 MYO5CQ9NQX4 1742 aa33.84■■■■□ 3.01
GCFC2-204ENST00000442309 CCDC18Q5T9S5 1454 aa33.81■■■■□ 3
GCFC2-204ENST00000442309 ARHGEF40Q8TER5 1519 aa33.78■■■■□ 3
GCFC2-204ENST00000442309 FYCO1Q9BQS8 1478 aa33.76■■■■□ 3
GCFC2-204ENST00000442309 SCAPERQ9BY12 1400 aa33.76■■■□□ 2.99
GCFC2-204ENST00000442309 EFCAB2Q5VUJ9 269 aa33.74■■■□□ 2.99
GCFC2-204ENST00000442309 ARID4BQ4LE39 1312 aaPredicted RBP33.74■■■□□ 2.99
GCFC2-204ENST00000442309 ZMYM4Q5VZL5 1548 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms