RNA–Protein interactions for RNA: ENST00000442309.5

GCFC2-204, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5

Gene GCFC2, Length 642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-204ENST00000442309 NISCHQ9Y2I1 1504 aa51.61■■■■■ 5.85
GCFC2-204ENST00000442309 CCDC180Q9P1Z9 1646 aa46.14■■■■■ 4.98
GCFC2-204ENST00000442309 ABCC9O60706 1549 aa45.81■■■■■ 4.92
GCFC2-204ENST00000442309 RB1CC1Q8TDY2 1594 aa43.74■■■■■ 4.59
GCFC2-204ENST00000442309 NACADO15069 1562 aa43.51■■■■■ 4.56
GCFC2-204ENST00000442309 DCAF8L2P0C7V8 631 aa43.49■■■■■ 4.55
GCFC2-204ENST00000442309 MYO15BQ96JP2 1530 aa42.98■■■■■ 4.47
GCFC2-204ENST00000442309 ZCCHC6Q5VYS8 1495 aaKnown RBP42.87■■■■■ 4.45
GCFC2-204ENST00000442309 UNC13AQ9UPW8 1703 aa42.79■■■■■ 4.44
GCFC2-204ENST00000442309 PABPN1Q86U42 306 aaKnown RBP eCLIP42.72■■■■■ 4.43
GCFC2-204ENST00000442309 DCAF1Q9Y4B6 1507 aa42.61■■■■■ 4.41
GCFC2-204ENST00000442309 DNAJC5BQ9UF47 199 aa42.57■■■■■ 4.41
GCFC2-204ENST00000442309 BICRAQ9NZM4 1560 aa42.44■■■■■ 4.39
GCFC2-204ENST00000442309 SCRIBQ14160 1630 aa42.14■■■■■ 4.34
GCFC2-204ENST00000442309 SHROOM4Q9ULL8 1493 aa41.85■■■■■ 4.29
GCFC2-204ENST00000442309 EIF4G1Q04637 1599 aaKnown RBP41.38■■■■■ 4.22
GCFC2-204ENST00000442309 CC2D2AQ9P2K1 1620 aa41.38■■■■■ 4.21
GCFC2-204ENST00000442309 CECR2Q9BXF3 1484 aa41.2■■■■■ 4.19
GCFC2-204ENST00000442309 SMARCA4P51532 1647 aa40.2■■■■■ 4.03
GCFC2-204ENST00000442309 NCAPD3P42695 1498 aa40.14■■■■■ 4.02
GCFC2-204ENST00000442309 ATAD2BQ9ULI0 1458 aa40.12■■■■■ 4.01
GCFC2-204ENST00000442309 BAZ1AQ9NRL2 1556 aaPredicted RBP40.04■■■■■ 4
GCFC2-204ENST00000442309 SMARCA2P51531 1590 aa40.02■■■■■ 4
GCFC2-204ENST00000442309 HMGXB3Q12766 1538 aa39.91■■■■□ 3.98
GCFC2-204ENST00000442309 MROH2BQ7Z745 1585 aa39.8■■■■□ 3.96
GCFC2-204ENST00000442309 BAZ1BQ9UIG0 1483 aaKnown RBP39.78■■■■□ 3.96
GCFC2-204ENST00000442309 PEG3Q9GZU2 1588 aa39.76■■■■□ 3.95
GCFC2-204ENST00000442309 ERCC6Q03468 1493 aa39.53■■■■□ 3.92
GCFC2-204ENST00000442309 NESP48681 1621 aa39.47■■■■□ 3.91
GCFC2-204ENST00000442309 WIZO95785 1651 aa39.37■■■■□ 3.89
GCFC2-204ENST00000442309 CUX2O14529 1486 aa39.25■■■■□ 3.87
GCFC2-204ENST00000442309 LAMC3Q9Y6N6 1575 aa39.21■■■■□ 3.87
GCFC2-204ENST00000442309 RSF1Q96T23 1441 aaPredicted RBP39.1■■■■□ 3.85
GCFC2-204ENST00000442309 KIF21AQ7Z4S6 1674 aa38.98■■■■□ 3.83
GCFC2-204ENST00000442309 PDS5BQ9NTI5 1447 aa38.97■■■■□ 3.83
GCFC2-204ENST00000442309 CADPSQ9ULU8 1353 aa38.97■■■■□ 3.83
GCFC2-204ENST00000442309 THOC2Q8NI27 1593 aaKnown RBP38.96■■■■□ 3.83
GCFC2-204ENST00000442309 TOP2AP11388 1531 aaKnown RBP38.87■■■■□ 3.81
GCFC2-204ENST00000442309 DNAJC5Q9H3Z4 198 aa38.76■■■■□ 3.8
GCFC2-204ENST00000442309 MRC2Q9UBG0 1479 aa38.63■■■■□ 3.77
GCFC2-204ENST00000442309 CFTRP13569 1480 aa38.6■■■■□ 3.77
GCFC2-204ENST00000442309 CEP164Q9UPV0 1460 aa38.56■■■■□ 3.76
GCFC2-204ENST00000442309 FANCD2Q9BXW9 1451 aa38.55■■■■□ 3.76
GCFC2-204ENST00000442309 WDR62O43379 1518 aa38.51■■■■□ 3.76
GCFC2-204ENST00000442309 CCDC88BA6NC98 1476 aa38.43■■■■□ 3.74
GCFC2-204ENST00000442309 PRDM2Q13029 1718 aa38.3■■■■□ 3.72
GCFC2-204ENST00000442309 URB2Q14146 1524 aaKnown RBP38.21■■■■□ 3.71
GCFC2-204ENST00000442309 TOPBP1Q92547 1522 aa37.87■■■■□ 3.65
GCFC2-204ENST00000442309 ABCC8Q09428 1581 aa37.77■■■■□ 3.64
GCFC2-204ENST00000442309 DNMBPQ6XZF7 1577 aa37.76■■■■□ 3.64
GCFC2-204ENST00000442309 SUPT5HO00267 1087 aaKnown RBP37.75■■■■□ 3.63
GCFC2-204ENST00000442309 IFT140Q96RY7 1462 aa37.75■■■■□ 3.63
GCFC2-204ENST00000442309 ZNF608Q9ULD9 1512 aaPredicted RBP37.69■■■■□ 3.62
GCFC2-204ENST00000442309 OSCARQ8IYS5 282 aa37.54■■■■□ 3.6
GCFC2-204ENST00000442309 POLA1P09884 1462 aaPredicted RBP37.51■■■■□ 3.59
GCFC2-204ENST00000442309 EIF4G3O43432 1585 aaKnown RBP37.51■■■■□ 3.59
GCFC2-204ENST00000442309 TARBP1Q13395 1621 aaKnown RBP37.49■■■■□ 3.59
GCFC2-204ENST00000442309 AQRO60306 1485 aaKnown RBP eCLIP37.4■■■■□ 3.589e-6■□□□□ 10.2
GCFC2-204ENST00000442309 RAD54L2Q9Y4B4 1467 aa37.39■■■■□ 3.58
GCFC2-204ENST00000442309 CUX1P39880 1505 aa37.37■■■■□ 3.57
GCFC2-204ENST00000442309 TRIM41Q8WV44 630 aa37.35■■■■□ 3.57
GCFC2-204ENST00000442309 SOGA1O94964 1423 aa37.35■■■■□ 3.57
GCFC2-204ENST00000442309 FGD5Q6ZNL6 1462 aa37.34■■■■□ 3.57
GCFC2-204ENST00000442309 TDRD9Q8NDG6 1382 aaKnown RBP37.23■■■■□ 3.55
GCFC2-204ENST00000442309 CHD1O14646 1710 aa37.17■■■■□ 3.54
GCFC2-204ENST00000442309 FBLN2P98095 1184 aa37.11■■■■□ 3.53
GCFC2-204ENST00000442309 WDR97A6NE52 1622 aa37.1■■■■□ 3.53
GCFC2-204ENST00000442309 RIMBP3CA6NJZ7 1639 aa37.04■■■■□ 3.52
GCFC2-204ENST00000442309 RIMBP3BA6NNM3 1639 aa37.04■■■■□ 3.52
GCFC2-204ENST00000442309 RIMBP3Q9UFD9 1639 aa37.04■■■■□ 3.52
GCFC2-204ENST00000442309 SNAPC4Q5SXM2 1469 aa37.04■■■■□ 3.52
GCFC2-204ENST00000442309 ARHGEF11O15085 1522 aa36.96■■■■□ 3.51
GCFC2-204ENST00000442309 GRIN2BQ13224 1484 aa36.96■■■■□ 3.51
GCFC2-204ENST00000442309 MAGI1Q96QZ7 1491 aaPredicted RBP36.92■■■■□ 3.5
GCFC2-204ENST00000442309 ABCA10Q8WWZ4 1543 aa36.91■■■■□ 3.5
GCFC2-204ENST00000442309 GAPVD1Q14C86 1478 aa36.9■■■■□ 3.5
GCFC2-204ENST00000442309 WRNQ14191 1432 aaPredicted RBP eCLIP36.9■■■■□ 3.5
GCFC2-204ENST00000442309 PBRM1Q86U86 1689 aa36.9■■■■□ 3.5
GCFC2-204ENST00000442309 TOP2BQ02880 1626 aa36.87■■■■□ 3.49
GCFC2-204ENST00000442309 BIVM-ERCC5R4GMW8 1640 aa36.87■■■■□ 3.49
GCFC2-204ENST00000442309 SYNJ1O43426 1573 aa36.87■■■■□ 3.49
GCFC2-204ENST00000442309 CHMP7Q8WUX9 453 aaPredicted RBP36.86■■■■□ 3.49
GCFC2-204ENST00000442309 ABCA5Q8WWZ7 1642 aa36.84■■■■□ 3.49
GCFC2-204ENST00000442309 SYNJ2O15056 1496 aa36.79■■■■□ 3.48
GCFC2-204ENST00000442309 CLASP1Q7Z460 1538 aa36.7■■■■□ 3.47
GCFC2-204ENST00000442309 CYB5RLQ6IPT4 315 aa36.68■■■■□ 3.46
GCFC2-204ENST00000442309 ARAP1Q96P48 1450 aa36.62■■■■□ 3.45
GCFC2-204ENST00000442309 ADAMTS12P58397 1594 aa36.55■■■■□ 3.44
GCFC2-204ENST00000442309 GRIN2AQ12879 1464 aa36.5■■■■□ 3.43
GCFC2-204ENST00000442309 ERICH3Q5RHP9 1530 aa36.45■■■■□ 3.43
GCFC2-204ENST00000442309 FHAD1B1AJZ9 1412 aa36.43■■■■□ 3.42
GCFC2-204ENST00000442309 CEP170Q5SW79 1584 aa36.37■■■■□ 3.41
GCFC2-204ENST00000442309 NUP160Q12769 1436 aa36.34■■■■□ 3.41
GCFC2-204ENST00000442309 ERCC6L2Q5T890 1561 aa36.21■■■■□ 3.39
GCFC2-204ENST00000442309 TRHP20396 242 aaPredicted RBP36.17■■■■□ 3.38
GCFC2-204ENST00000442309 KIF27Q86VH2 1401 aa36.17■■■■□ 3.38
GCFC2-204ENST00000442309 SHROOM2Q13796 1616 aa36.14■■■■□ 3.38
GCFC2-204ENST00000442309 IGF1RP08069 1367 aa36.08■■■■□ 3.37
GCFC2-204ENST00000442309 CUL7Q14999 1698 aa36.03■■■■□ 3.36
GCFC2-204ENST00000442309 RUSC2Q8N2Y8 1516 aa36.02■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms