RNA–Protein interactions for RNA: ENST00000441796.1

CRAT-204, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-204ENST00000441796 KIAA0586Q9BVV6 1533 aa38.79■■■■□ 3.8
CRAT-204ENST00000441796 ERCC6L2Q5T890 1561 aa38.78■■■■□ 3.8
CRAT-204ENST00000441796 PRG4Q92954 1404 aaPredicted RBP38.74■■■■□ 3.79
CRAT-204ENST00000441796 RAPGEF2Q9Y4G8 1499 aa38.69■■■■□ 3.78
CRAT-204ENST00000441796 PRXQ9BXM0 1461 aa38.53■■■■□ 3.76
CRAT-204ENST00000441796 CHIC1Q5VXU3 224 aa38.46■■■■□ 3.75
CRAT-204ENST00000441796 CSRNP3Q8WYN3 585 aa38.46■■■■□ 3.75
CRAT-204ENST00000441796 IQGAP2Q13576 1575 aa38.45■■■■□ 3.75
CRAT-204ENST00000441796 EEA1Q15075 1411 aa38.45■■■■□ 3.75
CRAT-204ENST00000441796 CARMIL2Q6F5E8 1435 aa38.38■■■■□ 3.74
CRAT-204ENST00000441796 TRHP20396 242 aaPredicted RBP38.36■■■■□ 3.73
CRAT-204ENST00000441796 UGGT2Q9NYU1 1516 aa38.3■■■■□ 3.72
CRAT-204ENST00000441796 TNIKQ9UKE5 1360 aa38.29■■■■□ 3.72
CRAT-204ENST00000441796 PTPRGP23470 1445 aa38.28■■■■□ 3.72
CRAT-204ENST00000441796 DISP1Q96F81 1524 aa38.26■■■■□ 3.72
CRAT-204ENST00000441796 FAM9AQ8IZU1 332 aaPredicted RBP38.18■■■■□ 3.7
CRAT-204ENST00000441796 CTTNBP2Q8WZ74 1663 aa38.16■■■■□ 3.7
CRAT-204ENST00000441796 NPM1P06748 294 aaKnown RBP eCLIP38.15■■■■□ 3.7
CRAT-204ENST00000441796 ADCY10Q96PN6 1610 aa38.11■■■■□ 3.69
CRAT-204ENST00000441796 TTBK1Q5TCY1 1321 aaPredicted RBP38.11■■■■□ 3.69
CRAT-204ENST00000441796 KIAA0556O60303 1618 aa38.09■■■■□ 3.69
CRAT-204ENST00000441796 GOLGA3Q08378 1498 aa38.09■■■■□ 3.69
CRAT-204ENST00000441796 UACAQ9BZF9 1416 aa38.01■■■■□ 3.68
CRAT-204ENST00000441796 UHRF1BP1LA0JNW5 1464 aa38■■■■□ 3.67
CRAT-204ENST00000441796 MAPKBP1O60336 1514 aa37.98■■■■□ 3.67
CRAT-204ENST00000441796 KIF21BO75037 1637 aa37.97■■■■□ 3.67
CRAT-204ENST00000441796 ABCC2Q92887 1545 aa37.94■■■■□ 3.66
CRAT-204ENST00000441796 ABCC10Q5T3U5 1492 aa37.86■■■■□ 3.65
CRAT-204ENST00000441796 FAM69CQ0P6D2 419 aa37.8■■■■□ 3.64
CRAT-204ENST00000441796 KDM5BQ9UGL1 1544 aa37.8■■■■□ 3.64
CRAT-204ENST00000441796 PLB1Q6P1J6 1458 aa37.78■■■■□ 3.64
CRAT-204ENST00000441796 P3H3Q8IVL6 736 aa37.78■■■■□ 3.64
CRAT-204ENST00000441796 SAMD9Q5K651 1589 aa37.76■■■■□ 3.64
CRAT-204ENST00000441796 ABCA8O94911 1581 aa37.73■■■■□ 3.63
CRAT-204ENST00000441796 ASXL2Q76L83 1435 aa37.72■■■■□ 3.63
CRAT-204ENST00000441796 UBTFP17480 764 aaKnown RBP37.72■■■■□ 3.63
CRAT-204ENST00000441796 DIP2BQ9P265 1576 aa37.72■■■■□ 3.63
CRAT-204ENST00000441796 KIF13AQ9H1H9 1805 aa37.7■■■■□ 3.63
CRAT-204ENST00000441796 RANGAP1P46060 587 aaPredicted RBP37.67■■■■□ 3.62
CRAT-204ENST00000441796 EHMT2Q96KQ7 1210 aa37.66■■■■□ 3.62
CRAT-204ENST00000441796 ZCCHC11Q5TAX3 1644 aaKnown RBP37.61■■■■□ 3.61
CRAT-204ENST00000441796 EFCAB5A4FU69 1503 aa37.6■■■■□ 3.61
CRAT-204ENST00000441796 FHOD3Q2V2M9 1422 aa37.56■■■■□ 3.6
CRAT-204ENST00000441796 GLI2P10070 1586 aa37.52■■■■□ 3.6
CRAT-204ENST00000441796 EPRSP07814 1512 aaKnown RBP37.5■■■■□ 3.59
CRAT-204ENST00000441796 WDR7Q9Y4E6 1490 aa37.49■■■■□ 3.59
CRAT-204ENST00000441796 ATP10BO94823 1461 aa37.45■■■■□ 3.59
CRAT-204ENST00000441796 RAPGEF6Q8TEU7 1601 aa37.43■■■■□ 3.58
CRAT-204ENST00000441796 ARID3CA6NKF2 412 aa37.39■■■■□ 3.58
CRAT-204ENST00000441796 ARHGAP35Q9NRY4 1499 aa37.39■■■■□ 3.58
CRAT-204ENST00000441796 NUP153P49790 1475 aaKnown RBP37.36■■■■□ 3.57
CRAT-204ENST00000441796 KCNH8Q96L42 1107 aa37.31■■■■□ 3.56
CRAT-204ENST00000441796 FMN1Q68DA7 1419 aa37.29■■■■□ 3.56
CRAT-204ENST00000441796 MAP3K4Q9Y6R4 1608 aa37.27■■■■□ 3.56
CRAT-204ENST00000441796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.26■■■■□ 3.56
CRAT-204ENST00000441796 HNRNPUL2Q1KMD3 747 aaKnown RBP37.26■■■■□ 3.56
CRAT-204ENST00000441796 TSPOAP1O95153 1857 aa37.25■■■■□ 3.55
CRAT-204ENST00000441796 PPRC1Q5VV67 1664 aaKnown RBP37.21■■■■□ 3.55
CRAT-204ENST00000441796 TEX14Q8IWB6 1497 aa37.2■■■■□ 3.54
CRAT-204ENST00000441796 CD109Q6YHK3 1445 aa37.19■■■■□ 3.54
CRAT-204ENST00000441796 KDM6BO15054 1643 aa37.16■■■■□ 3.54
CRAT-204ENST00000441796 PLEKHD1A6NEE1 506 aa37.15■■■■□ 3.54
CRAT-204ENST00000441796 MAGI3Q5TCQ9 1506 aa37.14■■■■□ 3.54
CRAT-204ENST00000441796 CFAP43Q8NDM7 1665 aa37.12■■■■□ 3.53
CRAT-204ENST00000441796 CLIP1P30622 1438 aa37.09■■■■□ 3.53
CRAT-204ENST00000441796 ATP1B4Q9UN42 357 aaPredicted RBP37.06■■■■□ 3.52
CRAT-204ENST00000441796 HECW1Q76N89 1606 aa37.06■■■■□ 3.52
CRAT-204ENST00000441796 CDK13Q14004 1512 aaKnown RBP37.03■■■■□ 3.52
CRAT-204ENST00000441796 ABCA9Q8IUA7 1624 aa37.03■■■■□ 3.52
CRAT-204ENST00000441796 COL17A1Q9UMD9 1497 aaPredicted RBP37.01■■■■□ 3.51
CRAT-204ENST00000441796 CASKIN1Q8WXD9 1431 aa36.97■■■■□ 3.51
CRAT-204ENST00000441796 CDK11AQ9UQ88 783 aaPredicted RBP36.96■■■■□ 3.51
CRAT-204ENST00000441796 PHLDB1Q86UU1 1377 aa36.9■■■■□ 3.5
CRAT-204ENST00000441796 CEP162Q5TB80 1403 aa36.86■■■■□ 3.49
CRAT-204ENST00000441796 PCF11O94913 1555 aaKnown RBP36.86■■■■□ 3.49
CRAT-204ENST00000441796 LOC105371045A0A1W2PR82 267 aa36.85■■■■□ 3.49
CRAT-204ENST00000441796 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.85■■■■□ 3.49
CRAT-204ENST00000441796 FYCO1Q9BQS8 1478 aa36.84■■■■□ 3.49
CRAT-204ENST00000441796 CCDC18Q5T9S5 1454 aa36.82■■■■□ 3.49
CRAT-204ENST00000441796 NEO1Q92859 1461 aa36.82■■■■□ 3.48
CRAT-204ENST00000441796 ARAP3Q8WWN8 1544 aa36.81■■■■□ 3.48
CRAT-204ENST00000441796 TROQ12816 1431 aaPredicted RBP36.8■■■■□ 3.48
CRAT-204ENST00000441796 TTC37Q6PGP7 1564 aa36.74■■■■□ 3.47
CRAT-204ENST00000441796 LRRIQ1Q96JM4 1722 aa36.73■■■■□ 3.47
CRAT-204ENST00000441796 PLCH2O75038 1416 aa36.69■■■■□ 3.46
CRAT-204ENST00000441796 FANCAO15360 1455 aa36.68■■■■□ 3.46
CRAT-204ENST00000441796 KIF14Q15058 1648 aa36.65■■■■□ 3.46
CRAT-204ENST00000441796 AKNAQ7Z591 1439 aa36.65■■■■□ 3.46
CRAT-204ENST00000441796 RAPGEF3O95398 923 aa36.61■■■■□ 3.45
CRAT-204ENST00000441796 CFAP74Q9C0B2 1584 aa36.6■■■■□ 3.45
CRAT-204ENST00000441796 AEBP2Q6ZN18 517 aaPredicted RBP36.59■■■■□ 3.45
CRAT-204ENST00000441796 EFCAB2Q5VUJ9 269 aa36.57■■■■□ 3.44
CRAT-204ENST00000441796 DENND4BO75064 1496 aaPredicted RBP36.56■■■■□ 3.44
CRAT-204ENST00000441796 KDM4FA0A1W2PPD8 638 aa36.51■■■■□ 3.44
CRAT-204ENST00000441796 MYO5CQ9NQX4 1742 aa36.48■■■■□ 3.43
CRAT-204ENST00000441796 FRMPD1Q5SYB0 1578 aa36.48■■■■□ 3.43
CRAT-204ENST00000441796 ADGRL1O94910 1474 aa36.47■■■■□ 3.43
CRAT-204ENST00000441796 VPS8Q8N3P4 1428 aa36.45■■■■□ 3.43
CRAT-204ENST00000441796 SCAPERQ9BY12 1400 aa36.45■■■■□ 3.43
CRAT-204ENST00000441796 MTUS2Q5JR59 1369 aa36.44■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms