RNA–Protein interactions for RNA: ENST00000441246.6

POLR2B-205, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2 BASIC

Gene POLR2B, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-205ENST00000441246 MSH5O43196 834 aa21.3■■□□□ 1
POLR2B-205ENST00000441246 CUX1P39880 1505 aa21.3■■□□□ 1
POLR2B-205ENST00000441246 SETD5Q9C0A6 1442 aa21.26■□□□□ 0.99
POLR2B-205ENST00000441246 PHLDB1Q86UU1 1377 aa21.23■□□□□ 0.99
POLR2B-205ENST00000441246 TIAM1Q13009 1591 aa21.22■□□□□ 0.99
POLR2B-205ENST00000441246 KIF27Q86VH2 1401 aa21.22■□□□□ 0.99
POLR2B-205ENST00000441246 NEFLP07196 543 aa21.21■□□□□ 0.99
POLR2B-205ENST00000441246 FAM50AQ14320 339 aaKnown RBP21.16■□□□□ 0.98
POLR2B-205ENST00000441246 CCER2I3L3R5 266 aa21.15■□□□□ 0.98
POLR2B-205ENST00000441246 LRRC9Q6ZRR7 1453 aa21.15■□□□□ 0.98
POLR2B-205ENST00000441246 ANP32CO43423 234 aa21.13■□□□□ 0.97
POLR2B-205ENST00000441246 IRX6P78412 446 aaPredicted RBP21.12■□□□□ 0.97
POLR2B-205ENST00000441246 MAP3K1Q13233 1512 aa21.08■□□□□ 0.96
POLR2B-205ENST00000441246 IGF1RP08069 1367 aa21.04■□□□□ 0.96
POLR2B-205ENST00000441246 P3H3Q8IVL6 736 aa21.01■□□□□ 0.95
POLR2B-205ENST00000441246 PCF11O94913 1555 aaKnown RBP21■□□□□ 0.95
POLR2B-205ENST00000441246 TIMELESSQ9UNS1 1208 aa21■□□□□ 0.95
POLR2B-205ENST00000441246 CFAP43Q8NDM7 1665 aa20.99■□□□□ 0.95
POLR2B-205ENST00000441246 FANCIQ9NVI1 1328 aa20.98■□□□□ 0.95
POLR2B-205ENST00000441246 HNRNPUQ00839 825 aaKnown RBP eCLIP20.98■□□□□ 0.95
POLR2B-205ENST00000441246 ATP1B4Q9UN42 357 aaPredicted RBP20.96■□□□□ 0.95
POLR2B-205ENST00000441246 CFTRP13569 1480 aa20.94■□□□□ 0.94
POLR2B-205ENST00000441246 CARMIL1Q5VZK9 1371 aa20.92■□□□□ 0.94
POLR2B-205ENST00000441246 TONSLQ96HA7 1378 aa20.92■□□□□ 0.94
POLR2B-205ENST00000441246 CDK11AQ9UQ88 783 aaPredicted RBP20.9■□□□□ 0.94
POLR2B-205ENST00000441246 KDM5BQ9UGL1 1544 aa20.89■□□□□ 0.94
POLR2B-205ENST00000441246 CCDC184Q52MB2 194 aa20.89■□□□□ 0.93
POLR2B-205ENST00000441246 PTPRKQ15262 1439 aa20.88■□□□□ 0.93
POLR2B-205ENST00000441246 HMGXB3Q12766 1538 aa20.87■□□□□ 0.93
POLR2B-205ENST00000441246 FHOD3Q2V2M9 1422 aa20.87■□□□□ 0.93
POLR2B-205ENST00000441246 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
POLR2B-205ENST00000441246 NCAPD3P42695 1498 aa20.86■□□□□ 0.93
POLR2B-205ENST00000441246 CCDC18Q5T9S5 1454 aa20.85■□□□□ 0.93
POLR2B-205ENST00000441246 AQRO60306 1485 aaKnown RBP eCLIP20.84■□□□□ 0.937e-7■■■■□ 20.3
POLR2B-205ENST00000441246 WASHC2AQ641Q2 1341 aa20.84■□□□□ 0.93
POLR2B-205ENST00000441246 ERICH6Q7L0X2 663 aa20.81■□□□□ 0.92
POLR2B-205ENST00000441246 FGD6Q6ZV73 1430 aa20.79■□□□□ 0.92
POLR2B-205ENST00000441246 FGD5Q6ZNL6 1462 aa20.79■□□□□ 0.92
POLR2B-205ENST00000441246 UACAQ9BZF9 1416 aa20.78■□□□□ 0.92
POLR2B-205ENST00000441246 PTPN23Q9H3S7 1636 aa20.78■□□□□ 0.92
POLR2B-205ENST00000441246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.78■□□□□ 0.92
POLR2B-205ENST00000441246 B4GALNT3Q6L9W6 998 aa20.78■□□□□ 0.92
POLR2B-205ENST00000441246 FYCO1Q9BQS8 1478 aa20.76■□□□□ 0.91
POLR2B-205ENST00000441246 HFM1A2PYH4 1435 aa20.76■□□□□ 0.91
POLR2B-205ENST00000441246 HSPA5P11021 654 aaKnown RBP20.75■□□□□ 0.91
POLR2B-205ENST00000441246 PPP4R2Q9NY27 417 aa20.75■□□□□ 0.91
POLR2B-205ENST00000441246 PRDM2Q13029 1718 aa20.74■□□□□ 0.91
POLR2B-205ENST00000441246 NAIPQ13075 1403 aa20.73■□□□□ 0.91
POLR2B-205ENST00000441246 CASKIN1Q8WXD9 1431 aa20.73■□□□□ 0.91
POLR2B-205ENST00000441246 C11orf95C9JLR9 678 aaPredicted RBP20.71■□□□□ 0.91
POLR2B-205ENST00000441246 DEKP35659 375 aaKnown RBP20.7■□□□□ 0.9
POLR2B-205ENST00000441246 DENND4BO75064 1496 aaPredicted RBP20.69■□□□□ 0.9
POLR2B-205ENST00000441246 LRRIQ1Q96JM4 1722 aa20.69■□□□□ 0.9
POLR2B-205ENST00000441246 FAM9BQ8IZU0 186 aa20.68■□□□□ 0.9
POLR2B-205ENST00000441246 PAK3O75914 559 aaPredicted RBP20.67■□□□□ 0.9
POLR2B-205ENST00000441246 NCOA2Q15596 1464 aa20.67■□□□□ 0.9
POLR2B-205ENST00000441246 SNAPC4Q5SXM2 1469 aa20.65■□□□□ 0.9
POLR2B-205ENST00000441246 ERICH6BQ5W0A0 696 aa20.64■□□□□ 0.9
POLR2B-205ENST00000441246 CNTLNQ9NXG0 1405 aa20.64■□□□□ 0.89
POLR2B-205ENST00000441246 PRKRIP1Q9H875 184 aaPredicted RBP20.62■□□□□ 0.89
POLR2B-205ENST00000441246 NBR1Q14596 966 aa20.62■□□□□ 0.89
POLR2B-205ENST00000441246 MTUS2Q5JR59 1369 aa20.61■□□□□ 0.89
POLR2B-205ENST00000441246 EFCAB5A4FU69 1503 aa20.61■□□□□ 0.89
POLR2B-205ENST00000441246 RAD54L2Q9Y4B4 1467 aa20.6■□□□□ 0.89
POLR2B-205ENST00000441246 RRP7BPQ9NSQ0 103 aa20.6■□□□□ 0.89
POLR2B-205ENST00000441246 KDM6BO15054 1643 aa20.6■□□□□ 0.89
POLR2B-205ENST00000441246 MRS2Q9HD23 443 aa20.58■□□□□ 0.89
POLR2B-205ENST00000441246 EIF4G2P78344 907 aaKnown RBP eCLIP20.58■□□□□ 0.88
POLR2B-205ENST00000441246 ZBED9Q6R2W3 1325 aa20.58■□□□□ 0.88
POLR2B-205ENST00000441246 CHIC2Q9UKJ5 165 aa20.57■□□□□ 0.88
POLR2B-205ENST00000441246 FMN1Q68DA7 1419 aa20.57■□□□□ 0.88
POLR2B-205ENST00000441246 CTTNBP2Q8WZ74 1663 aa20.57■□□□□ 0.88
POLR2B-205ENST00000441246 CADPSQ9ULU8 1353 aa20.56■□□□□ 0.88
POLR2B-205ENST00000441246 FOXD1Q16676 465 aa20.56■□□□□ 0.88
POLR2B-205ENST00000441246 NOP58Q9Y2X3 529 aaKnown RBP20.56■□□□□ 0.88
POLR2B-205ENST00000441246 MYOM3Q5VTT5 1437 aa20.56■□□□□ 0.88
POLR2B-205ENST00000441246 CCDC7Q96M83 1385 aa20.55■□□□□ 0.88
POLR2B-205ENST00000441246 AKNAQ7Z591 1439 aa20.55■□□□□ 0.88
POLR2B-205ENST00000441246 NCOA1Q15788 1441 aa20.54■□□□□ 0.88
POLR2B-205ENST00000441246 L3MBTL2Q969R5 705 aa20.53■□□□□ 0.88
POLR2B-205ENST00000441246 SENP3-EIF4A1A0A087X0R7 540 aa20.52■□□□□ 0.88
POLR2B-205ENST00000441246 HECW1Q76N89 1606 aa20.5■□□□□ 0.87
POLR2B-205ENST00000441246 MAGI3Q5TCQ9 1506 aa20.5■□□□□ 0.87
POLR2B-205ENST00000441246 NBPF8Q3BBV2 869 aa20.49■□□□□ 0.87
POLR2B-205ENST00000441246 MYT1LQ9UL68 1186 aa20.49■□□□□ 0.87
POLR2B-205ENST00000441246 SUPT6HQ7KZ85 1726 aaKnown RBP20.47■□□□□ 0.87
POLR2B-205ENST00000441246 CNGB1Q14028 1251 aaPredicted RBP20.47■□□□□ 0.87
POLR2B-205ENST00000441246 GCC2Q8IWJ2 1684 aa20.46■□□□□ 0.87
POLR2B-205ENST00000441246 GRIN2BQ13224 1484 aa20.46■□□□□ 0.87
POLR2B-205ENST00000441246 ABCA10Q8WWZ4 1543 aa20.46■□□□□ 0.87
POLR2B-205ENST00000441246 KIF7Q2M1P5 1343 aa20.45■□□□□ 0.86
POLR2B-205ENST00000441246 POLA1P09884 1462 aaPredicted RBP20.45■□□□□ 0.86
POLR2B-205ENST00000441246 MPHOSPH9Q99550 1183 aa20.44■□□□□ 0.86
POLR2B-205ENST00000441246 UGGT2Q9NYU1 1516 aa20.44■□□□□ 0.86
POLR2B-205ENST00000441246 SAMD9Q5K651 1589 aa20.43■□□□□ 0.86
POLR2B-205ENST00000441246 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
POLR2B-205ENST00000441246 CC2D2AQ9P2K1 1620 aa20.42■□□□□ 0.86
POLR2B-205ENST00000441246 CUL7Q14999 1698 aa20.42■□□□□ 0.86
POLR2B-205ENST00000441246 ARHGEF11O15085 1522 aa20.42■□□□□ 0.86
POLR2B-205ENST00000441246 SPATA31E1Q6ZUB1 1445 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms