RNA–Protein interactions for RNA: ENST00000440902.2

LYSMD1-202, Transcript of LysM domain containing 1, humanhuman

TSL 2 BASIC

Gene LYSMD1, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-202ENST00000440902 PRG4Q92954 1404 aaPredicted RBP14.26□□□□□ -0.13
LYSMD1-202ENST00000440902 KIF13AQ9H1H9 1805 aa14.26□□□□□ -0.13
LYSMD1-202ENST00000440902 JPH4Q96JJ6 628 aa14.2□□□□□ -0.14
LYSMD1-202ENST00000440902 CUL7Q14999 1698 aa14.19□□□□□ -0.14
LYSMD1-202ENST00000440902 ADCY10Q96PN6 1610 aa14.15□□□□□ -0.14
LYSMD1-202ENST00000440902 KIF27Q86VH2 1401 aa14.14□□□□□ -0.15
LYSMD1-202ENST00000440902 KIAA0586Q9BVV6 1533 aa14.12□□□□□ -0.15
LYSMD1-202ENST00000440902 IGF1RP08069 1367 aa14.11□□□□□ -0.15
LYSMD1-202ENST00000440902 MAPKBP1O60336 1514 aa14.11□□□□□ -0.15
LYSMD1-202ENST00000440902 DIP2BQ9P265 1576 aa14.11□□□□□ -0.15
LYSMD1-202ENST00000440902 NPM1P06748 294 aaKnown RBP eCLIP14.1□□□□□ -0.15
LYSMD1-202ENST00000440902 ABCC10Q5T3U5 1492 aa14.1□□□□□ -0.15
LYSMD1-202ENST00000440902 TSPOAP1O95153 1857 aa14.08□□□□□ -0.16
LYSMD1-202ENST00000440902 FAM69CQ0P6D2 419 aa14.08□□□□□ -0.16
LYSMD1-202ENST00000440902 CARMIL1Q5VZK9 1371 aa14.05□□□□□ -0.16
LYSMD1-202ENST00000440902 TTBK1Q5TCY1 1321 aaPredicted RBP14.04□□□□□ -0.16
LYSMD1-202ENST00000440902 IQGAP2Q13576 1575 aa14.03□□□□□ -0.16
LYSMD1-202ENST00000440902 KDM6BO15054 1643 aa14.03□□□□□ -0.16
LYSMD1-202ENST00000440902 PTPRGP23470 1445 aa14.01□□□□□ -0.17
LYSMD1-202ENST00000440902 CARMIL2Q6F5E8 1435 aa13.99□□□□□ -0.17
LYSMD1-202ENST00000440902 TNIKQ9UKE5 1360 aa13.97□□□□□ -0.17
LYSMD1-202ENST00000440902 ABCC2Q92887 1545 aa13.97□□□□□ -0.17
LYSMD1-202ENST00000440902 PPRC1Q5VV67 1664 aaKnown RBP13.94□□□□□ -0.18
LYSMD1-202ENST00000440902 DISP1Q96F81 1524 aa13.94□□□□□ -0.18
LYSMD1-202ENST00000440902 ASXL2Q76L83 1435 aa13.93□□□□□ -0.18
LYSMD1-202ENST00000440902 RAPGEF2Q9Y4G8 1499 aa13.93□□□□□ -0.18
LYSMD1-202ENST00000440902 UHRF1BP1LA0JNW5 1464 aa13.92□□□□□ -0.18
LYSMD1-202ENST00000440902 CTTNBP2Q8WZ74 1663 aa13.91□□□□□ -0.18
LYSMD1-202ENST00000440902 KIAA0556O60303 1618 aa13.91□□□□□ -0.18
LYSMD1-202ENST00000440902 PLB1Q6P1J6 1458 aa13.91□□□□□ -0.18
LYSMD1-202ENST00000440902 UACAQ9BZF9 1416 aa13.9□□□□□ -0.18
LYSMD1-202ENST00000440902 UGGT2Q9NYU1 1516 aa13.9□□□□□ -0.18
LYSMD1-202ENST00000440902 ZCCHC11Q5TAX3 1644 aaKnown RBP13.9□□□□□ -0.18
LYSMD1-202ENST00000440902 GLI2P10070 1586 aa13.9□□□□□ -0.18
LYSMD1-202ENST00000440902 MAP3K4Q9Y6R4 1608 aa13.86□□□□□ -0.19
LYSMD1-202ENST00000440902 KDM5BQ9UGL1 1544 aa13.86□□□□□ -0.19
LYSMD1-202ENST00000440902 EPRSP07814 1512 aaKnown RBP13.85□□□□□ -0.19
LYSMD1-202ENST00000440902 KDM4FA0A1W2PPD8 638 aa13.84□□□□□ -0.19
LYSMD1-202ENST00000440902 TEX14Q8IWB6 1497 aa13.79□□□□□ -0.2
LYSMD1-202ENST00000440902 WDR7Q9Y4E6 1490 aa13.79□□□□□ -0.2
LYSMD1-202ENST00000440902 GOLGA3Q08378 1498 aa13.78□□□□□ -0.2
LYSMD1-202ENST00000440902 ADGRL1O94910 1474 aa13.77□□□□□ -0.21
LYSMD1-202ENST00000440902 SENP3Q9H4L4 574 aaPredicted RBP13.77□□□□□ -0.21
LYSMD1-202ENST00000440902 COL17A1Q9UMD9 1497 aaPredicted RBP13.77□□□□□ -0.21
LYSMD1-202ENST00000440902 ABCA8O94911 1581 aa13.76□□□□□ -0.21
LYSMD1-202ENST00000440902 CFAP43Q8NDM7 1665 aa13.75□□□□□ -0.21
LYSMD1-202ENST00000440902 PRXQ9BXM0 1461 aa13.74□□□□□ -0.21
LYSMD1-202ENST00000440902 KCNH8Q96L42 1107 aa13.7□□□□□ -0.22
LYSMD1-202ENST00000440902 CD109Q6YHK3 1445 aa13.69□□□□□ -0.22
LYSMD1-202ENST00000440902 MAGI3Q5TCQ9 1506 aa13.68□□□□□ -0.22
LYSMD1-202ENST00000440902 ARID3CA6NKF2 412 aa13.67□□□□□ -0.22
LYSMD1-202ENST00000440902 P3H3Q8IVL6 736 aa13.67□□□□□ -0.22
LYSMD1-202ENST00000440902 KIF21BO75037 1637 aa13.65□□□□□ -0.22
LYSMD1-202ENST00000440902 SAMD9Q5K651 1589 aa13.65□□□□□ -0.22
LYSMD1-202ENST00000440902 RAPGEF6Q8TEU7 1601 aa13.64□□□□□ -0.23
LYSMD1-202ENST00000440902 HECW2Q9P2P5 1572 aa13.63□□□□□ -0.23
LYSMD1-202ENST00000440902 ATP10BO94823 1461 aa13.62□□□□□ -0.23
LYSMD1-202ENST00000440902 FAM9AQ8IZU1 332 aaPredicted RBP13.62□□□□□ -0.23
LYSMD1-202ENST00000440902 ABCA9Q8IUA7 1624 aa13.61□□□□□ -0.23
LYSMD1-202ENST00000440902 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
LYSMD1-202ENST00000440902 RANGAP1P46060 587 aaPredicted RBP13.58□□□□□ -0.24
LYSMD1-202ENST00000440902 ARAP3Q8WWN8 1544 aa13.58□□□□□ -0.24
LYSMD1-202ENST00000440902 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
LYSMD1-202ENST00000440902 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
LYSMD1-202ENST00000440902 FHOD3Q2V2M9 1422 aa13.55□□□□□ -0.24
LYSMD1-202ENST00000440902 EEA1Q15075 1411 aa13.54□□□□□ -0.24
LYSMD1-202ENST00000440902 NUP153P49790 1475 aaKnown RBP13.54□□□□□ -0.24
LYSMD1-202ENST00000440902 ILDR1Q86SU0 546 aaPredicted RBP13.52□□□□□ -0.25
LYSMD1-202ENST00000440902 FRMPD1Q5SYB0 1578 aa13.52□□□□□ -0.25
LYSMD1-202ENST00000440902 NEO1Q92859 1461 aa13.51□□□□□ -0.25
LYSMD1-202ENST00000440902 ADAMTSL3P82987 1691 aa13.5□□□□□ -0.25
LYSMD1-202ENST00000440902 PHLDB1Q86UU1 1377 aa13.5□□□□□ -0.25
LYSMD1-202ENST00000440902 RAPGEF3O95398 923 aa13.5□□□□□ -0.25
LYSMD1-202ENST00000440902 BCORL1Q5H9F3 1711 aa13.48□□□□□ -0.25
LYSMD1-202ENST00000440902 EFCAB5A4FU69 1503 aa13.48□□□□□ -0.25
LYSMD1-202ENST00000440902 RICTORQ6R327 1708 aa13.47□□□□□ -0.25
LYSMD1-202ENST00000440902 CFAP74Q9C0B2 1584 aa13.47□□□□□ -0.25
LYSMD1-202ENST00000440902 MADDQ8WXG6 1647 aa13.46□□□□□ -0.25
LYSMD1-202ENST00000440902 TTC37Q6PGP7 1564 aa13.46□□□□□ -0.25
LYSMD1-202ENST00000440902 ARHGEF40Q8TER5 1519 aa13.46□□□□□ -0.25
LYSMD1-202ENST00000440902 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.45□□□□□ -0.26
LYSMD1-202ENST00000440902 PTPRMP28827 1452 aa13.45□□□□□ -0.26
LYSMD1-202ENST00000440902 PLEKHD1A6NEE1 506 aa13.44□□□□□ -0.26
LYSMD1-202ENST00000440902 CDK13Q14004 1512 aaKnown RBP13.44□□□□□ -0.26
LYSMD1-202ENST00000440902 RIMS1Q86UR5 1692 aaKnown RBP13.44□□□□□ -0.26
LYSMD1-202ENST00000440902 ARID4BQ4LE39 1312 aaPredicted RBP13.43□□□□□ -0.26
LYSMD1-202ENST00000440902 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
LYSMD1-202ENST00000440902 FANCAO15360 1455 aa13.42□□□□□ -0.26
LYSMD1-202ENST00000440902 DENND4BO75064 1496 aaPredicted RBP13.42□□□□□ -0.26
LYSMD1-202ENST00000440902 AKNAQ7Z591 1439 aa13.42□□□□□ -0.26
LYSMD1-202ENST00000440902 HECW1Q76N89 1606 aa13.39□□□□□ -0.27
LYSMD1-202ENST00000440902 SIGLEC1Q9BZZ2 1709 aa13.39□□□□□ -0.27
LYSMD1-202ENST00000440902 ZMYM4Q5VZL5 1548 aa13.39□□□□□ -0.27
LYSMD1-202ENST00000440902 MYO5CQ9NQX4 1742 aa13.38□□□□□ -0.27
LYSMD1-202ENST00000440902 ZFYVE16Q7Z3T8 1539 aa13.38□□□□□ -0.27
LYSMD1-202ENST00000440902 PCF11O94913 1555 aaKnown RBP13.37□□□□□ -0.27
LYSMD1-202ENST00000440902 UBTFP17480 764 aaKnown RBP13.36□□□□□ -0.27
LYSMD1-202ENST00000440902 ATP1B4Q9UN42 357 aaPredicted RBP13.36□□□□□ -0.27
LYSMD1-202ENST00000440902 FER1L4A9Z1Z3 1794 aa13.35□□□□□ -0.27
LYSMD1-202ENST00000440902 YEATS2Q9ULM3 1422 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms