RNA–Protein interactions for RNA: ENST00000440902.2

LYSMD1-202, Transcript of LysM domain containing 1, humanhuman

TSL 2 BASIC

Gene LYSMD1, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-202ENST00000440902 NISCHQ9Y2I1 1504 aa20.28■□□□□ 0.84
LYSMD1-202ENST00000440902 ABCC9O60706 1549 aa18.33■□□□□ 0.53
LYSMD1-202ENST00000440902 CCDC180Q9P1Z9 1646 aa18.3■□□□□ 0.52
LYSMD1-202ENST00000440902 RB1CC1Q8TDY2 1594 aa17.42■□□□□ 0.38
LYSMD1-202ENST00000440902 NACADO15069 1562 aa17.26■□□□□ 0.35
LYSMD1-202ENST00000440902 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
LYSMD1-202ENST00000440902 DCAF8L2P0C7V8 631 aa17.16■□□□□ 0.34
LYSMD1-202ENST00000440902 UNC13AQ9UPW8 1703 aa17.11■□□□□ 0.33
LYSMD1-202ENST00000440902 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
LYSMD1-202ENST00000440902 MYO15BQ96JP2 1530 aa16.96■□□□□ 0.3
LYSMD1-202ENST00000440902 BICRAQ9NZM4 1560 aa16.91■□□□□ 0.3
LYSMD1-202ENST00000440902 ZCCHC6Q5VYS8 1495 aaKnown RBP16.8■□□□□ 0.28
LYSMD1-202ENST00000440902 DCAF1Q9Y4B6 1507 aa16.72■□□□□ 0.27
LYSMD1-202ENST00000440902 SCRIBQ14160 1630 aa16.69■□□□□ 0.26
LYSMD1-202ENST00000440902 SHROOM4Q9ULL8 1493 aa16.63■□□□□ 0.25
LYSMD1-202ENST00000440902 CC2D2AQ9P2K1 1620 aa16.58■□□□□ 0.24
LYSMD1-202ENST00000440902 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
LYSMD1-202ENST00000440902 CECR2Q9BXF3 1484 aa16.5■□□□□ 0.23
LYSMD1-202ENST00000440902 AEBP2Q6ZN18 517 aaPredicted RBP16.31■□□□□ 0.2
LYSMD1-202ENST00000440902 CHIC1Q5VXU3 224 aa16.23■□□□□ 0.19
LYSMD1-202ENST00000440902 SMARCA4P51532 1647 aa15.89■□□□□ 0.13
LYSMD1-202ENST00000440902 NCAPD3P42695 1498 aa15.89■□□□□ 0.13
LYSMD1-202ENST00000440902 ATAD2BQ9ULI0 1458 aa15.86■□□□□ 0.13
LYSMD1-202ENST00000440902 ERCC6Q03468 1493 aa15.84■□□□□ 0.13
LYSMD1-202ENST00000440902 SMARCA2P51531 1590 aa15.83■□□□□ 0.13
LYSMD1-202ENST00000440902 DNAJC5Q9H3Z4 198 aa15.82■□□□□ 0.12
LYSMD1-202ENST00000440902 HMGXB3Q12766 1538 aa15.82■□□□□ 0.12
LYSMD1-202ENST00000440902 CUX2O14529 1486 aa15.8■□□□□ 0.12
LYSMD1-202ENST00000440902 BAZ1AQ9NRL2 1556 aaPredicted RBP15.76■□□□□ 0.11
LYSMD1-202ENST00000440902 BAZ1BQ9UIG0 1483 aaKnown RBP15.73■□□□□ 0.11
LYSMD1-202ENST00000440902 NESP48681 1621 aa15.73■□□□□ 0.11
LYSMD1-202ENST00000440902 PEG3Q9GZU2 1588 aa15.68■□□□□ 0.1
LYSMD1-202ENST00000440902 MROH2BQ7Z745 1585 aa15.65■□□□□ 0.1
LYSMD1-202ENST00000440902 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
LYSMD1-202ENST00000440902 LAMC3Q9Y6N6 1575 aa15.61■□□□□ 0.09
LYSMD1-202ENST00000440902 KIF21AQ7Z4S6 1674 aa15.6■□□□□ 0.09
LYSMD1-202ENST00000440902 WIZO95785 1651 aa15.51■□□□□ 0.07
LYSMD1-202ENST00000440902 PDS5BQ9NTI5 1447 aa15.48■□□□□ 0.07
LYSMD1-202ENST00000440902 CADPSQ9ULU8 1353 aa15.41■□□□□ 0.06
LYSMD1-202ENST00000440902 MRC2Q9UBG0 1479 aa15.39■□□□□ 0.05
LYSMD1-202ENST00000440902 WDR62O43379 1518 aa15.35■□□□□ 0.05
LYSMD1-202ENST00000440902 CEP164Q9UPV0 1460 aa15.32■□□□□ 0.04
LYSMD1-202ENST00000440902 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.04
LYSMD1-202ENST00000440902 TOP2AP11388 1531 aaKnown RBP15.27■□□□□ 0.03
LYSMD1-202ENST00000440902 RSF1Q96T23 1441 aaPredicted RBP15.26■□□□□ 0.03
LYSMD1-202ENST00000440902 CFTRP13569 1480 aa15.23■□□□□ 0.03
LYSMD1-202ENST00000440902 PRDM2Q13029 1718 aa15.21■□□□□ 0.03
LYSMD1-202ENST00000440902 TRIM41Q8WV44 630 aa15.17■□□□□ 0.02
LYSMD1-202ENST00000440902 URB2Q14146 1524 aaKnown RBP15.17■□□□□ 0.02
LYSMD1-202ENST00000440902 CCDC88BA6NC98 1476 aa15.07■□□□□ 0
LYSMD1-202ENST00000440902 OSCARQ8IYS5 282 aa15.03■□□□□ -0
LYSMD1-202ENST00000440902 ZNF608Q9ULD9 1512 aaPredicted RBP14.99□□□□□ -0.01
LYSMD1-202ENST00000440902 TOPBP1Q92547 1522 aa14.98□□□□□ -0.01
LYSMD1-202ENST00000440902 IFT140Q96RY7 1462 aa14.98□□□□□ -0.01
LYSMD1-202ENST00000440902 EIF4G3O43432 1585 aaKnown RBP14.95□□□□□ -0.02
LYSMD1-202ENST00000440902 DNMBPQ6XZF7 1577 aa14.94□□□□□ -0.02
LYSMD1-202ENST00000440902 RIMBP3CA6NJZ7 1639 aa14.94□□□□□ -0.02
LYSMD1-202ENST00000440902 RIMBP3BA6NNM3 1639 aa14.94□□□□□ -0.02
LYSMD1-202ENST00000440902 RIMBP3Q9UFD9 1639 aa14.94□□□□□ -0.02
LYSMD1-202ENST00000440902 ABCC8Q09428 1581 aa14.91□□□□□ -0.02
LYSMD1-202ENST00000440902 CHD1O14646 1710 aa14.89□□□□□ -0.03
LYSMD1-202ENST00000440902 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
LYSMD1-202ENST00000440902 ARHGEF11O15085 1522 aa14.85□□□□□ -0.03
LYSMD1-202ENST00000440902 AQRO60306 1485 aaKnown RBP eCLIP14.83□□□□□ -0.03
LYSMD1-202ENST00000440902 POLA1P09884 1462 aaPredicted RBP14.82□□□□□ -0.04
LYSMD1-202ENST00000440902 RAD54L2Q9Y4B4 1467 aa14.78□□□□□ -0.04
LYSMD1-202ENST00000440902 FBLN2P98095 1184 aa14.76□□□□□ -0.05
LYSMD1-202ENST00000440902 FGD5Q6ZNL6 1462 aa14.74□□□□□ -0.05
LYSMD1-202ENST00000440902 SOGA1O94964 1423 aa14.74□□□□□ -0.05
LYSMD1-202ENST00000440902 TDRD9Q8NDG6 1382 aaKnown RBP14.73□□□□□ -0.05
LYSMD1-202ENST00000440902 CUX1P39880 1505 aa14.71□□□□□ -0.05
LYSMD1-202ENST00000440902 WDR97A6NE52 1622 aa14.7□□□□□ -0.06
LYSMD1-202ENST00000440902 SNAPC4Q5SXM2 1469 aa14.7□□□□□ -0.06
LYSMD1-202ENST00000440902 ARAP1Q96P48 1450 aa14.7□□□□□ -0.06
LYSMD1-202ENST00000440902 CYB5RLQ6IPT4 315 aa14.7□□□□□ -0.06
LYSMD1-202ENST00000440902 PBRM1Q86U86 1689 aa14.66□□□□□ -0.06
LYSMD1-202ENST00000440902 CLASP1Q7Z460 1538 aa14.64□□□□□ -0.07
LYSMD1-202ENST00000440902 SYNJ1O43426 1573 aa14.64□□□□□ -0.07
LYSMD1-202ENST00000440902 MAGI1Q96QZ7 1491 aaPredicted RBP14.63□□□□□ -0.07
LYSMD1-202ENST00000440902 GRIN2BQ13224 1484 aa14.63□□□□□ -0.07
LYSMD1-202ENST00000440902 CHMP7Q8WUX9 453 aaPredicted RBP14.61□□□□□ -0.07
LYSMD1-202ENST00000440902 SYNJ2O15056 1496 aa14.59□□□□□ -0.07
LYSMD1-202ENST00000440902 TRHP20396 242 aaPredicted RBP14.59□□□□□ -0.07
LYSMD1-202ENST00000440902 GAPVD1Q14C86 1478 aa14.57□□□□□ -0.08
LYSMD1-202ENST00000440902 ABCA5Q8WWZ7 1642 aa14.57□□□□□ -0.08
LYSMD1-202ENST00000440902 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
LYSMD1-202ENST00000440902 ABCA10Q8WWZ4 1543 aa14.54□□□□□ -0.08
LYSMD1-202ENST00000440902 BIVM-ERCC5R4GMW8 1640 aa14.49□□□□□ -0.09
LYSMD1-202ENST00000440902 ADAMTS12P58397 1594 aa14.47□□□□□ -0.09
LYSMD1-202ENST00000440902 TOP2BQ02880 1626 aa14.46□□□□□ -0.09
LYSMD1-202ENST00000440902 WRNQ14191 1432 aaPredicted RBP eCLIP14.45□□□□□ -0.1
LYSMD1-202ENST00000440902 GRIN2AQ12879 1464 aa14.44□□□□□ -0.1
LYSMD1-202ENST00000440902 ERCC6L2Q5T890 1561 aa14.43□□□□□ -0.1
LYSMD1-202ENST00000440902 CEP170Q5SW79 1584 aa14.43□□□□□ -0.1
LYSMD1-202ENST00000440902 NUP160Q12769 1436 aa14.38□□□□□ -0.11
LYSMD1-202ENST00000440902 SHROOM2Q13796 1616 aa14.37□□□□□ -0.11
LYSMD1-202ENST00000440902 FHAD1B1AJZ9 1412 aa14.37□□□□□ -0.11
LYSMD1-202ENST00000440902 ERICH3Q5RHP9 1530 aa14.36□□□□□ -0.11
LYSMD1-202ENST00000440902 PHF23Q9BUL5 403 aaPredicted RBP14.32□□□□□ -0.12
LYSMD1-202ENST00000440902 RUSC2Q8N2Y8 1516 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms