RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
ACTN4-204ENST00000440400 EIF4G3O43432 1585 aaKnown RBP20.5■□□□□ 0.87
ACTN4-204ENST00000440400 FHAD1B1AJZ9 1412 aa20.49■□□□□ 0.87
ACTN4-204ENST00000440400 CFAP43Q8NDM7 1665 aa20.47■□□□□ 0.87
ACTN4-204ENST00000440400 AQRO60306 1485 aaKnown RBP eCLIP20.46■□□□□ 0.871e-7■■■■■ 29
ACTN4-204ENST00000440400 ERCC6Q03468 1493 aa20.46■□□□□ 0.87
ACTN4-204ENST00000440400 ZNF608Q9ULD9 1512 aaPredicted RBP20.42■□□□□ 0.86
ACTN4-204ENST00000440400 TIAM1Q13009 1591 aa20.4■□□□□ 0.86
ACTN4-204ENST00000440400 PCF11O94913 1555 aaKnown RBP20.39■□□□□ 0.85
ACTN4-204ENST00000440400 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
ACTN4-204ENST00000440400 FYCO1Q9BQS8 1478 aa20.37■□□□□ 0.85
ACTN4-204ENST00000440400 IQGAP2Q13576 1575 aa20.35■□□□□ 0.85
ACTN4-204ENST00000440400 UGGT2Q9NYU1 1516 aa20.33■□□□□ 0.85
ACTN4-204ENST00000440400 SNAPC4Q5SXM2 1469 aa20.33■□□□□ 0.85
ACTN4-204ENST00000440400 CASKIN1Q8WXD9 1431 aa20.32■□□□□ 0.84
ACTN4-204ENST00000440400 LRRIQ1Q96JM4 1722 aa20.29■□□□□ 0.84
ACTN4-204ENST00000440400 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
ACTN4-204ENST00000440400 RRBP1Q9P2E9 1410 aaKnown RBP20.27■□□□□ 0.84
ACTN4-204ENST00000440400 FMN1Q68DA7 1419 aa20.26■□□□□ 0.83
ACTN4-204ENST00000440400 SYNJ2O15056 1496 aa20.25■□□□□ 0.83
ACTN4-204ENST00000440400 FHOD3Q2V2M9 1422 aa20.24■□□□□ 0.83
ACTN4-204ENST00000440400 SCAF1Q9H7N4 1312 aaKnown RBP20.24■□□□□ 0.83
ACTN4-204ENST00000440400 KIAA0586Q9BVV6 1533 aa20.24■□□□□ 0.83
ACTN4-204ENST00000440400 LRRC9Q6ZRR7 1453 aa20.23■□□□□ 0.83
ACTN4-204ENST00000440400 CEP170Q5SW79 1584 aa20.21■□□□□ 0.83
ACTN4-204ENST00000440400 KIAA0556O60303 1618 aa20.19■□□□□ 0.82
ACTN4-204ENST00000440400 NUP160Q12769 1436 aa20.18■□□□□ 0.82
ACTN4-204ENST00000440400 APLP2Q06481 763 aa20.18■□□□□ 0.82
ACTN4-204ENST00000440400 KANK4Q5T7N3 995 aaPredicted RBP20.16■□□□□ 0.82
ACTN4-204ENST00000440400 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
ACTN4-204ENST00000440400 DISP1Q96F81 1524 aa20.15■□□□□ 0.82
ACTN4-204ENST00000440400 ZEB1P37275 1124 aaPredicted RBP20.14■□□□□ 0.82
ACTN4-204ENST00000440400 HECW1Q76N89 1606 aa20.13■□□□□ 0.81
ACTN4-204ENST00000440400 CCDC18Q5T9S5 1454 aa20.1■□□□□ 0.81
ACTN4-204ENST00000440400 ARHGEF11O15085 1522 aa20.09■□□□□ 0.81
ACTN4-204ENST00000440400 EHBP1L1Q8N3D4 1523 aa20.06■□□□□ 0.8
ACTN4-204ENST00000440400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.04■□□□□ 0.8
ACTN4-204ENST00000440400 MYT1Q01538 1121 aa20.03■□□□□ 0.8
ACTN4-204ENST00000440400 CHD1O14646 1710 aa20.01■□□□□ 0.79
ACTN4-204ENST00000440400 SHROOM2Q13796 1616 aa20.01■□□□□ 0.79
ACTN4-204ENST00000440400 SUPT6HQ7KZ85 1726 aaKnown RBP20.01■□□□□ 0.79
ACTN4-204ENST00000440400 CCNB3Q8WWL7 1395 aa20.01■□□□□ 0.79
ACTN4-204ENST00000440400 RAPGEF6Q8TEU7 1601 aa20■□□□□ 0.79
ACTN4-204ENST00000440400 MAGI3Q5TCQ9 1506 aa19.99■□□□□ 0.79
ACTN4-204ENST00000440400 PHLDB1Q86UU1 1377 aa19.98■□□□□ 0.79
ACTN4-204ENST00000440400 TTBK1Q5TCY1 1321 aaPredicted RBP19.97■□□□□ 0.79
ACTN4-204ENST00000440400 EPRSP07814 1512 aaKnown RBP19.97■□□□□ 0.79
ACTN4-204ENST00000440400 P3H3Q8IVL6 736 aa19.96■□□□□ 0.79
ACTN4-204ENST00000440400 ADCY10Q96PN6 1610 aa19.91■□□□□ 0.78
ACTN4-204ENST00000440400 ABCA8O94911 1581 aa19.91■□□□□ 0.78
ACTN4-204ENST00000440400 NUP153P49790 1475 aaKnown RBP19.91■□□□□ 0.78
ACTN4-204ENST00000440400 NCOA2Q15596 1464 aa19.89■□□□□ 0.77
ACTN4-204ENST00000440400 TCOF1Q13428 1488 aaKnown RBP19.88■□□□□ 0.77
ACTN4-204ENST00000440400 CHMP7Q8WUX9 453 aaPredicted RBP19.88■□□□□ 0.77
ACTN4-204ENST00000440400 FGD6Q6ZV73 1430 aa19.86■□□□□ 0.77
ACTN4-204ENST00000440400 CLASP1Q7Z460 1538 aa19.86■□□□□ 0.77
ACTN4-204ENST00000440400 CARMIL2Q6F5E8 1435 aa19.85■□□□□ 0.77
ACTN4-204ENST00000440400 CDK13Q14004 1512 aaKnown RBP19.85■□□□□ 0.77
ACTN4-204ENST00000440400 MYOM3Q5VTT5 1437 aa19.84■□□□□ 0.77
ACTN4-204ENST00000440400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.83■□□□□ 0.77
ACTN4-204ENST00000440400 PTPN23Q9H3S7 1636 aa19.82■□□□□ 0.76
ACTN4-204ENST00000440400 MTUS2Q5JR59 1369 aa19.81■□□□□ 0.76
ACTN4-204ENST00000440400 CLSPNQ9HAW4 1339 aa19.79■□□□□ 0.76
ACTN4-204ENST00000440400 CCER1Q8TC90 406 aaPredicted RBP19.78■□□□□ 0.76
ACTN4-204ENST00000440400 MIA2Q96PC5 1412 aa19.77■□□□□ 0.76
ACTN4-204ENST00000440400 HNRNPUL2Q1KMD3 747 aaKnown RBP19.77■□□□□ 0.76
ACTN4-204ENST00000440400 JPH4Q96JJ6 628 aa19.76■□□□□ 0.75
ACTN4-204ENST00000440400 DHX57Q6P158 1386 aaKnown RBP19.75■□□□□ 0.75
ACTN4-204ENST00000440400 PLB1Q6P1J6 1458 aa19.74■□□□□ 0.75
ACTN4-204ENST00000440400 ITSN2Q9NZM3 1697 aa19.73■□□□□ 0.75
ACTN4-204ENST00000440400 GCC2Q8IWJ2 1684 aa19.72■□□□□ 0.75
ACTN4-204ENST00000440400 AKNAQ7Z591 1439 aa19.7■□□□□ 0.74
ACTN4-204ENST00000440400 PRG4Q92954 1404 aaPredicted RBP19.7■□□□□ 0.74
ACTN4-204ENST00000440400 SETD5Q9C0A6 1442 aa19.7■□□□□ 0.74
ACTN4-204ENST00000440400 TROQ12816 1431 aaPredicted RBP19.69■□□□□ 0.74
ACTN4-204ENST00000440400 DNMT1P26358 1616 aaKnown RBP19.66■□□□□ 0.74
ACTN4-204ENST00000440400 HFM1A2PYH4 1435 aa19.66■□□□□ 0.74
ACTN4-204ENST00000440400 PTPRKQ15262 1439 aa19.65■□□□□ 0.74
ACTN4-204ENST00000440400 RAB3GAP2Q9H2M9 1393 aa19.65■□□□□ 0.74
ACTN4-204ENST00000440400 ATP1B4Q9UN42 357 aaPredicted RBP19.65■□□□□ 0.74
ACTN4-204ENST00000440400 MAPKBP1O60336 1514 aa19.65■□□□□ 0.74
ACTN4-204ENST00000440400 KIF14Q15058 1648 aa19.65■□□□□ 0.74
ACTN4-204ENST00000440400 ATP10BO94823 1461 aa19.64■□□□□ 0.73
ACTN4-204ENST00000440400 CROCC2H7BZ55 1655 aa19.63■□□□□ 0.73
ACTN4-204ENST00000440400 ABCC10Q5T3U5 1492 aa19.62■□□□□ 0.73
ACTN4-204ENST00000440400 FBLN2P98095 1184 aa19.62■□□□□ 0.73
ACTN4-204ENST00000440400 ERCC6L2Q5T890 1561 aa19.62■□□□□ 0.73
ACTN4-204ENST00000440400 CDC42BPAQ5VT25 1732 aa19.61■□□□□ 0.73
ACTN4-204ENST00000440400 UHRF1BP1LA0JNW5 1464 aa19.61■□□□□ 0.73
ACTN4-204ENST00000440400 ABCC2Q92887 1545 aa19.6■□□□□ 0.73
ACTN4-204ENST00000440400 PTPRGP23470 1445 aa19.57■□□□□ 0.72
ACTN4-204ENST00000440400 ADGBQ8N7X0 1667 aa19.57■□□□□ 0.72
ACTN4-204ENST00000440400 NAIPQ13075 1403 aa19.56■□□□□ 0.72
ACTN4-204ENST00000440400 UACAQ9BZF9 1416 aa19.56■□□□□ 0.72
ACTN4-204ENST00000440400 GPATCH8Q9UKJ3 1502 aaKnown RBP19.56■□□□□ 0.72
ACTN4-204ENST00000440400 CDK11AQ9UQ88 783 aaPredicted RBP19.54■□□□□ 0.72
ACTN4-204ENST00000440400 ROCK1Q13464 1354 aa19.53■□□□□ 0.72
ACTN4-204ENST00000440400 NEUROD1Q13562 356 aa19.53■□□□□ 0.72
ACTN4-204ENST00000440400 FAM50AQ14320 339 aaKnown RBP19.53■□□□□ 0.72
ACTN4-204ENST00000440400 PREX2Q70Z35 1606 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms