RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 PRG4Q92954 1404 aaPredicted RBP29.99■■■□□ 2.39
CCDC188-201ENST00000439765 JPH4Q96JJ6 628 aa29.97■■■□□ 2.39
CCDC188-201ENST00000439765 KIAA0586Q9BVV6 1533 aa29.93■■■□□ 2.38
CCDC188-201ENST00000439765 CARMIL1Q5VZK9 1371 aa29.86■■■□□ 2.37
CCDC188-201ENST00000439765 KIF13AQ9H1H9 1805 aa29.77■■■□□ 2.36
CCDC188-201ENST00000439765 CHIC1Q5VXU3 224 aa29.74■■■□□ 2.35
CCDC188-201ENST00000439765 ADCY10Q96PN6 1610 aa29.72■■■□□ 2.35
CCDC188-201ENST00000439765 IQGAP2Q13576 1575 aa29.72■■■□□ 2.35
CCDC188-201ENST00000439765 RAPGEF2Q9Y4G8 1499 aa29.71■■■□□ 2.35
CCDC188-201ENST00000439765 MAPKBP1O60336 1514 aa29.65■■■□□ 2.34
CCDC188-201ENST00000439765 CTTNBP2Q8WZ74 1663 aa29.62■■■□□ 2.33
CCDC188-201ENST00000439765 PRXQ9BXM0 1461 aa29.61■■■□□ 2.33
CCDC188-201ENST00000439765 EEA1Q15075 1411 aa29.61■■■□□ 2.33
CCDC188-201ENST00000439765 CARMIL2Q6F5E8 1435 aa29.6■■■□□ 2.33
CCDC188-201ENST00000439765 PTPRGP23470 1445 aa29.54■■■□□ 2.32
CCDC188-201ENST00000439765 ABCC10Q5T3U5 1492 aa29.54■■■□□ 2.32
CCDC188-201ENST00000439765 TNIKQ9UKE5 1360 aa29.54■■■□□ 2.32
CCDC188-201ENST00000439765 NPM1P06748 294 aaKnown RBP eCLIP29.54■■■□□ 2.32
CCDC188-201ENST00000439765 DIP2BQ9P265 1576 aa29.53■■■□□ 2.32
CCDC188-201ENST00000439765 UGGT2Q9NYU1 1516 aa29.53■■■□□ 2.32
CCDC188-201ENST00000439765 FAM9AQ8IZU1 332 aaPredicted RBP29.53■■■□□ 2.32
CCDC188-201ENST00000439765 DISP1Q96F81 1524 aa29.52■■■□□ 2.32
CCDC188-201ENST00000439765 CSRNP3Q8WYN3 585 aa29.51■■■□□ 2.31
CCDC188-201ENST00000439765 KIAA0556O60303 1618 aa29.46■■■□□ 2.31
CCDC188-201ENST00000439765 ABCC2Q92887 1545 aa29.43■■■□□ 2.3
CCDC188-201ENST00000439765 UHRF1BP1LA0JNW5 1464 aa29.42■■■□□ 2.3
CCDC188-201ENST00000439765 KIF21BO75037 1637 aa29.41■■■□□ 2.3
CCDC188-201ENST00000439765 FAM69CQ0P6D2 419 aa29.4■■■□□ 2.3
CCDC188-201ENST00000439765 UACAQ9BZF9 1416 aa29.37■■■□□ 2.29
CCDC188-201ENST00000439765 TSPOAP1O95153 1857 aa29.35■■■□□ 2.29
CCDC188-201ENST00000439765 TTBK1Q5TCY1 1321 aaPredicted RBP29.35■■■□□ 2.29
CCDC188-201ENST00000439765 KDM5BQ9UGL1 1544 aa29.28■■■□□ 2.28
CCDC188-201ENST00000439765 GOLGA3Q08378 1498 aa29.28■■■□□ 2.28
CCDC188-201ENST00000439765 PLB1Q6P1J6 1458 aa29.28■■■□□ 2.28
CCDC188-201ENST00000439765 ASXL2Q76L83 1435 aa29.27■■■□□ 2.28
CCDC188-201ENST00000439765 ZCCHC11Q5TAX3 1644 aaKnown RBP29.26■■■□□ 2.27
CCDC188-201ENST00000439765 GLI2P10070 1586 aa29.26■■■□□ 2.27
CCDC188-201ENST00000439765 EHMT2Q96KQ7 1210 aa29.2■■■□□ 2.26
CCDC188-201ENST00000439765 KDM6BO15054 1643 aa29.2■■■□□ 2.26
CCDC188-201ENST00000439765 PPRC1Q5VV67 1664 aaKnown RBP29.19■■■□□ 2.26
CCDC188-201ENST00000439765 ABCA8O94911 1581 aa29.17■■■□□ 2.26
CCDC188-201ENST00000439765 SAMD9Q5K651 1589 aa29.14■■■□□ 2.26
CCDC188-201ENST00000439765 MAP3K4Q9Y6R4 1608 aa29.13■■■□□ 2.25
CCDC188-201ENST00000439765 EPRSP07814 1512 aaKnown RBP29.12■■■□□ 2.25
CCDC188-201ENST00000439765 RANGAP1P46060 587 aaPredicted RBP29.06■■■□□ 2.24
CCDC188-201ENST00000439765 WDR7Q9Y4E6 1490 aa29.05■■■□□ 2.24
CCDC188-201ENST00000439765 UBTFP17480 764 aaKnown RBP29.04■■■□□ 2.24
CCDC188-201ENST00000439765 AEBP2Q6ZN18 517 aaPredicted RBP29.01■■■□□ 2.23
CCDC188-201ENST00000439765 P3H3Q8IVL6 736 aa29.01■■■□□ 2.23
CCDC188-201ENST00000439765 EFCAB5A4FU69 1503 aa28.99■■■□□ 2.23
CCDC188-201ENST00000439765 CFAP43Q8NDM7 1665 aa28.96■■■□□ 2.23
CCDC188-201ENST00000439765 TEX14Q8IWB6 1497 aa28.95■■■□□ 2.23
CCDC188-201ENST00000439765 FHOD3Q2V2M9 1422 aa28.93■■■□□ 2.22
CCDC188-201ENST00000439765 RAPGEF6Q8TEU7 1601 aa28.91■■■□□ 2.22
CCDC188-201ENST00000439765 ATP10BO94823 1461 aa28.85■■■□□ 2.21
CCDC188-201ENST00000439765 COL17A1Q9UMD9 1497 aaPredicted RBP28.85■■■□□ 2.21
CCDC188-201ENST00000439765 MAGI3Q5TCQ9 1506 aa28.84■■■□□ 2.21
CCDC188-201ENST00000439765 ARHGAP35Q9NRY4 1499 aa28.83■■■□□ 2.21
CCDC188-201ENST00000439765 CD109Q6YHK3 1445 aa28.8■■■□□ 2.2
CCDC188-201ENST00000439765 KCNH8Q96L42 1107 aa28.76■■■□□ 2.19
CCDC188-201ENST00000439765 ABCA9Q8IUA7 1624 aa28.76■■■□□ 2.19
CCDC188-201ENST00000439765 NUP153P49790 1475 aaKnown RBP28.74■■■□□ 2.19
CCDC188-201ENST00000439765 ARID3CA6NKF2 412 aa28.72■■■□□ 2.19
CCDC188-201ENST00000439765 KDM4FA0A1W2PPD8 638 aa28.68■■■□□ 2.18
CCDC188-201ENST00000439765 FMN1Q68DA7 1419 aa28.66■■■□□ 2.18
CCDC188-201ENST00000439765 CLIP1P30622 1438 aa28.65■■■□□ 2.18
CCDC188-201ENST00000439765 HECW1Q76N89 1606 aa28.63■■■□□ 2.17
CCDC188-201ENST00000439765 ARAP3Q8WWN8 1544 aa28.61■■■□□ 2.17
CCDC188-201ENST00000439765 PCF11O94913 1555 aaKnown RBP28.59■■■□□ 2.17
CCDC188-201ENST00000439765 ADGRL1O94910 1474 aa28.58■■■□□ 2.17
CCDC188-201ENST00000439765 LRRIQ1Q96JM4 1722 aa28.58■■■□□ 2.17
CCDC188-201ENST00000439765 CDK13Q14004 1512 aaKnown RBP28.57■■■□□ 2.16
CCDC188-201ENST00000439765 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.56■■■□□ 2.16
CCDC188-201ENST00000439765 HNRNPUL2Q1KMD3 747 aaKnown RBP28.56■■■□□ 2.16
CCDC188-201ENST00000439765 CEP162Q5TB80 1403 aa28.55■■■□□ 2.16
CCDC188-201ENST00000439765 LOC105371045A0A1W2PR82 267 aa28.55■■■□□ 2.16
CCDC188-201ENST00000439765 PHLDB1Q86UU1 1377 aa28.55■■■□□ 2.16
CCDC188-201ENST00000439765 NEO1Q92859 1461 aa28.53■■■□□ 2.16
CCDC188-201ENST00000439765 ATP1B4Q9UN42 357 aaPredicted RBP28.49■■■□□ 2.15
CCDC188-201ENST00000439765 PLEKHD1A6NEE1 506 aa28.47■■■□□ 2.15
CCDC188-201ENST00000439765 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.46■■■□□ 2.15
CCDC188-201ENST00000439765 TTC37Q6PGP7 1564 aa28.45■■■□□ 2.14
CCDC188-201ENST00000439765 CASKIN1Q8WXD9 1431 aa28.44■■■□□ 2.14
CCDC188-201ENST00000439765 CFAP74Q9C0B2 1584 aa28.44■■■□□ 2.14
CCDC188-201ENST00000439765 FYCO1Q9BQS8 1478 aa28.43■■■□□ 2.14
CCDC188-201ENST00000439765 FRMPD1Q5SYB0 1578 aa28.42■■■□□ 2.14
CCDC188-201ENST00000439765 RICTORQ6R327 1708 aa28.39■■■□□ 2.13
CCDC188-201ENST00000439765 CCDC18Q5T9S5 1454 aa28.36■■■□□ 2.13
CCDC188-201ENST00000439765 FANCAO15360 1455 aa28.34■■■□□ 2.13
CCDC188-201ENST00000439765 MYO5CQ9NQX4 1742 aa28.32■■■□□ 2.12
CCDC188-201ENST00000439765 RAPGEF3O95398 923 aa28.32■■■□□ 2.12
CCDC188-201ENST00000439765 AKNAQ7Z591 1439 aa28.31■■■□□ 2.12
CCDC188-201ENST00000439765 KIF14Q15058 1648 aa28.3■■■□□ 2.12
CCDC188-201ENST00000439765 DENND4BO75064 1496 aaPredicted RBP28.29■■■□□ 2.12
CCDC188-201ENST00000439765 ARHGEF40Q8TER5 1519 aa28.26■■■□□ 2.12
CCDC188-201ENST00000439765 ZMYM4Q5VZL5 1548 aa28.25■■■□□ 2.11
CCDC188-201ENST00000439765 ADAMTSL3P82987 1691 aa28.25■■■□□ 2.11
CCDC188-201ENST00000439765 PLCH2O75038 1416 aa28.25■■■□□ 2.11
CCDC188-201ENST00000439765 TROQ12816 1431 aaPredicted RBP28.25■■■□□ 2.11
CCDC188-201ENST00000439765 CDK11AQ9UQ88 783 aaPredicted RBP28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms