RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 SHROOM2Q13796 1616 aa19.76■□□□□ 0.75
HSPG2-206ENST00000439717 PRXQ9BXM0 1461 aa19.75■□□□□ 0.75
HSPG2-206ENST00000439717 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
HSPG2-206ENST00000439717 JPH4Q96JJ6 628 aa19.74■□□□□ 0.75
HSPG2-206ENST00000439717 ARAP1Q96P48 1450 aa19.73■□□□□ 0.75
HSPG2-206ENST00000439717 CYB5RLQ6IPT4 315 aa19.69■□□□□ 0.74
HSPG2-206ENST00000439717 PRG4Q92954 1404 aaPredicted RBP19.68■□□□□ 0.74
HSPG2-206ENST00000439717 ERCC6L2Q5T890 1561 aa19.66■□□□□ 0.74
HSPG2-206ENST00000439717 IQGAP2Q13576 1575 aa19.65■□□□□ 0.74
HSPG2-206ENST00000439717 FAM9AQ8IZU1 332 aaPredicted RBP19.64■□□□□ 0.73
HSPG2-206ENST00000439717 CTTNBP2Q8WZ74 1663 aa19.57■□□□□ 0.72
HSPG2-206ENST00000439717 UGGT2Q9NYU1 1516 aa19.56■□□□□ 0.72
HSPG2-206ENST00000439717 KIF21BO75037 1637 aa19.56■□□□□ 0.72
HSPG2-206ENST00000439717 CARMIL2Q6F5E8 1435 aa19.56■□□□□ 0.72
HSPG2-206ENST00000439717 DISP1Q96F81 1524 aa19.5■□□□□ 0.71
HSPG2-206ENST00000439717 TNIKQ9UKE5 1360 aa19.49■□□□□ 0.71
HSPG2-206ENST00000439717 GOLGA3Q08378 1498 aa19.47■□□□□ 0.71
HSPG2-206ENST00000439717 PTPRGP23470 1445 aa19.46■□□□□ 0.71
HSPG2-206ENST00000439717 KIAA0556O60303 1618 aa19.45■□□□□ 0.7
HSPG2-206ENST00000439717 UBTFP17480 764 aaKnown RBP19.39■□□□□ 0.69
HSPG2-206ENST00000439717 TTBK1Q5TCY1 1321 aaPredicted RBP19.36■□□□□ 0.69
HSPG2-206ENST00000439717 ADCY10Q96PN6 1610 aa19.36■□□□□ 0.69
HSPG2-206ENST00000439717 SAMD9Q5K651 1589 aa19.36■□□□□ 0.69
HSPG2-206ENST00000439717 NPM1P06748 294 aaKnown RBP eCLIP19.34■□□□□ 0.69
HSPG2-206ENST00000439717 EHMT2Q96KQ7 1210 aa19.34■□□□□ 0.69
HSPG2-206ENST00000439717 UHRF1BP1LA0JNW5 1464 aa19.34■□□□□ 0.69
HSPG2-206ENST00000439717 UACAQ9BZF9 1416 aa19.34■□□□□ 0.69
HSPG2-206ENST00000439717 EFCAB5A4FU69 1503 aa19.3■□□□□ 0.68
HSPG2-206ENST00000439717 ABCC2Q92887 1545 aa19.3■□□□□ 0.68
HSPG2-206ENST00000439717 P3H3Q8IVL6 736 aa19.29■□□□□ 0.68
HSPG2-206ENST00000439717 RANGAP1P46060 587 aaPredicted RBP19.28■□□□□ 0.68
HSPG2-206ENST00000439717 TRHP20396 242 aaPredicted RBP19.27■□□□□ 0.68
HSPG2-206ENST00000439717 MAPKBP1O60336 1514 aa19.25■□□□□ 0.67
HSPG2-206ENST00000439717 ABCA8O94911 1581 aa19.24■□□□□ 0.67
HSPG2-206ENST00000439717 PLB1Q6P1J6 1458 aa19.24■□□□□ 0.67
HSPG2-206ENST00000439717 KDM5BQ9UGL1 1544 aa19.22■□□□□ 0.67
HSPG2-206ENST00000439717 FHOD3Q2V2M9 1422 aa19.22■□□□□ 0.67
HSPG2-206ENST00000439717 ARHGAP35Q9NRY4 1499 aa19.19■□□□□ 0.66
HSPG2-206ENST00000439717 ZCCHC11Q5TAX3 1644 aaKnown RBP19.16■□□□□ 0.66
HSPG2-206ENST00000439717 ABCC10Q5T3U5 1492 aa19.16■□□□□ 0.66
HSPG2-206ENST00000439717 ASXL2Q76L83 1435 aa19.15■□□□□ 0.66
HSPG2-206ENST00000439717 RAPGEF6Q8TEU7 1601 aa19.14■□□□□ 0.66
HSPG2-206ENST00000439717 FMN1Q68DA7 1419 aa19.13■□□□□ 0.65
HSPG2-206ENST00000439717 DIP2BQ9P265 1576 aa19.1■□□□□ 0.65
HSPG2-206ENST00000439717 FAM69CQ0P6D2 419 aa19.1■□□□□ 0.65
HSPG2-206ENST00000439717 ATP10BO94823 1461 aa19.09■□□□□ 0.65
HSPG2-206ENST00000439717 CLIP1P30622 1438 aa19.09■□□□□ 0.65
HSPG2-206ENST00000439717 KIF13AQ9H1H9 1805 aa19.09■□□□□ 0.65
HSPG2-206ENST00000439717 NUP153P49790 1475 aaKnown RBP19.08■□□□□ 0.64
HSPG2-206ENST00000439717 WDR7Q9Y4E6 1490 aa19.07■□□□□ 0.64
HSPG2-206ENST00000439717 LOC105371045A0A1W2PR82 267 aa19.05■□□□□ 0.64
HSPG2-206ENST00000439717 GLI2P10070 1586 aa19.05■□□□□ 0.64
HSPG2-206ENST00000439717 EPRSP07814 1512 aaKnown RBP19.04■□□□□ 0.64
HSPG2-206ENST00000439717 ARID3CA6NKF2 412 aa19.03■□□□□ 0.64
HSPG2-206ENST00000439717 CEP162Q5TB80 1403 aa19.01■□□□□ 0.63
HSPG2-206ENST00000439717 HECW1Q76N89 1606 aa19■□□□□ 0.63
HSPG2-206ENST00000439717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19■□□□□ 0.63
HSPG2-206ENST00000439717 HNRNPUL2Q1KMD3 747 aaKnown RBP19■□□□□ 0.63
HSPG2-206ENST00000439717 ATP1B4Q9UN42 357 aaPredicted RBP18.97■□□□□ 0.63
HSPG2-206ENST00000439717 CASKIN1Q8WXD9 1431 aa18.97■□□□□ 0.63
HSPG2-206ENST00000439717 PLEKHD1A6NEE1 506 aa18.95■□□□□ 0.62
HSPG2-206ENST00000439717 KCNH8Q96L42 1107 aa18.95■□□□□ 0.62
HSPG2-206ENST00000439717 MAP3K4Q9Y6R4 1608 aa18.93■□□□□ 0.62
HSPG2-206ENST00000439717 CDK13Q14004 1512 aaKnown RBP18.93■□□□□ 0.62
HSPG2-206ENST00000439717 PCF11O94913 1555 aaKnown RBP18.93■□□□□ 0.62
HSPG2-206ENST00000439717 FYCO1Q9BQS8 1478 aa18.92■□□□□ 0.62
HSPG2-206ENST00000439717 CDK11AQ9UQ88 783 aaPredicted RBP18.91■□□□□ 0.62
HSPG2-206ENST00000439717 CFAP43Q8NDM7 1665 aa18.9■□□□□ 0.62
HSPG2-206ENST00000439717 CCDC18Q5T9S5 1454 aa18.9■□□□□ 0.62
HSPG2-206ENST00000439717 TSPOAP1O95153 1857 aa18.88■□□□□ 0.61
HSPG2-206ENST00000439717 CD109Q6YHK3 1445 aa18.88■□□□□ 0.61
HSPG2-206ENST00000439717 TEX14Q8IWB6 1497 aa18.87■□□□□ 0.61
HSPG2-206ENST00000439717 PPRC1Q5VV67 1664 aaKnown RBP18.86■□□□□ 0.61
HSPG2-206ENST00000439717 ABCA9Q8IUA7 1624 aa18.86■□□□□ 0.61
HSPG2-206ENST00000439717 MAGI3Q5TCQ9 1506 aa18.86■□□□□ 0.61
HSPG2-206ENST00000439717 LRRIQ1Q96JM4 1722 aa18.86■□□□□ 0.61
HSPG2-206ENST00000439717 TROQ12816 1431 aaPredicted RBP18.83■□□□□ 0.6
HSPG2-206ENST00000439717 VPS8Q8N3P4 1428 aa18.8■□□□□ 0.6
HSPG2-206ENST00000439717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.6
HSPG2-206ENST00000439717 KDM6BO15054 1643 aa18.78■□□□□ 0.6
HSPG2-206ENST00000439717 KIF14Q15058 1648 aa18.76■□□□□ 0.59
HSPG2-206ENST00000439717 PHLDB1Q86UU1 1377 aa18.76■□□□□ 0.59
HSPG2-206ENST00000439717 TTC37Q6PGP7 1564 aa18.74■□□□□ 0.59
HSPG2-206ENST00000439717 NEO1Q92859 1461 aa18.73■□□□□ 0.59
HSPG2-206ENST00000439717 PLCH2O75038 1416 aa18.71■□□□□ 0.59
HSPG2-206ENST00000439717 COL17A1Q9UMD9 1497 aaPredicted RBP18.7■□□□□ 0.58
HSPG2-206ENST00000439717 ARAP3Q8WWN8 1544 aa18.69■□□□□ 0.58
HSPG2-206ENST00000439717 MTUS2Q5JR59 1369 aa18.69■□□□□ 0.58
HSPG2-206ENST00000439717 CFAP74Q9C0B2 1584 aa18.68■□□□□ 0.58
HSPG2-206ENST00000439717 FANCAO15360 1455 aa18.68■□□□□ 0.58
HSPG2-206ENST00000439717 MYO5CQ9NQX4 1742 aa18.67■□□□□ 0.58
HSPG2-206ENST00000439717 MAP3K1Q13233 1512 aa18.66■□□□□ 0.58
HSPG2-206ENST00000439717 EHBP1L1Q8N3D4 1523 aa18.66■□□□□ 0.58
HSPG2-206ENST00000439717 TIAM1Q13009 1591 aa18.66■□□□□ 0.58
HSPG2-206ENST00000439717 AKNAQ7Z591 1439 aa18.65■□□□□ 0.58
HSPG2-206ENST00000439717 EFCAB2Q5VUJ9 269 aa18.64■□□□□ 0.57
HSPG2-206ENST00000439717 ARHGAP5Q13017 1502 aa18.61■□□□□ 0.57
HSPG2-206ENST00000439717 APLP2Q06481 763 aa18.6■□□□□ 0.57
HSPG2-206ENST00000439717 PREX2Q70Z35 1606 aa18.6■□□□□ 0.57
HSPG2-206ENST00000439717 LRRC9Q6ZRR7 1453 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms