RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 ABCA5Q8WWZ7 1642 aa16.21■□□□□ 0.19
AC011228.1-201ENST00000439027 TOP2BQ02880 1626 aa16.17■□□□□ 0.18
AC011228.1-201ENST00000439027 BIVM-ERCC5R4GMW8 1640 aa16.15■□□□□ 0.18
AC011228.1-201ENST00000439027 GRIN2AQ12879 1464 aa16.14■□□□□ 0.17
AC011228.1-201ENST00000439027 FHAD1B1AJZ9 1412 aa16.11■□□□□ 0.17
AC011228.1-201ENST00000439027 ADAMTS12P58397 1594 aa16.1■□□□□ 0.17
AC011228.1-201ENST00000439027 NUP160Q12769 1436 aa16.08■□□□□ 0.16
AC011228.1-201ENST00000439027 CEP170Q5SW79 1584 aa16.06■□□□□ 0.16
AC011228.1-201ENST00000439027 ERICH3Q5RHP9 1530 aa16.06■□□□□ 0.16
AC011228.1-201ENST00000439027 ERCC6L2Q5T890 1561 aa16.04■□□□□ 0.16
AC011228.1-201ENST00000439027 JPH4Q96JJ6 628 aa16■□□□□ 0.15
AC011228.1-201ENST00000439027 CNKSR2Q8WXI2 1034 aa15.98■□□□□ 0.15
AC011228.1-201ENST00000439027 PRG4Q92954 1404 aaPredicted RBP15.98■□□□□ 0.15
AC011228.1-201ENST00000439027 SHROOM2Q13796 1616 aa15.95■□□□□ 0.14
AC011228.1-201ENST00000439027 KIF27Q86VH2 1401 aa15.93■□□□□ 0.14
AC011228.1-201ENST00000439027 IGF1RP08069 1367 aa15.92■□□□□ 0.14
AC011228.1-201ENST00000439027 NPM1P06748 294 aaKnown RBP eCLIP15.88■□□□□ 0.13
AC011228.1-201ENST00000439027 RUSC2Q8N2Y8 1516 aa15.86■□□□□ 0.13
AC011228.1-201ENST00000439027 KIAA0586Q9BVV6 1533 aa15.84■□□□□ 0.13
AC011228.1-201ENST00000439027 CARMIL1Q5VZK9 1371 aa15.84■□□□□ 0.13
AC011228.1-201ENST00000439027 NCBP3Q53F19 620 aaKnown RBP15.82■□□□□ 0.12
AC011228.1-201ENST00000439027 TTBK1Q5TCY1 1321 aaPredicted RBP15.82■□□□□ 0.12
AC011228.1-201ENST00000439027 CUL7Q14999 1698 aa15.82■□□□□ 0.12
AC011228.1-201ENST00000439027 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
AC011228.1-201ENST00000439027 FAM69CQ0P6D2 419 aa15.8■□□□□ 0.12
AC011228.1-201ENST00000439027 RNF216Q9NWF9 866 aaPredicted RBP15.76■□□□□ 0.11
AC011228.1-201ENST00000439027 PTPRGP23470 1445 aa15.75■□□□□ 0.11
AC011228.1-201ENST00000439027 KIF13AQ9H1H9 1805 aa15.73■□□□□ 0.11
AC011228.1-201ENST00000439027 ADCY10Q96PN6 1610 aa15.72■□□□□ 0.11
AC011228.1-201ENST00000439027 CARMIL2Q6F5E8 1435 aa15.72■□□□□ 0.11
AC011228.1-201ENST00000439027 ABCC10Q5T3U5 1492 aa15.71■□□□□ 0.11
AC011228.1-201ENST00000439027 TNIKQ9UKE5 1360 aa15.7■□□□□ 0.1
AC011228.1-201ENST00000439027 MAPKBP1O60336 1514 aa15.69■□□□□ 0.1
AC011228.1-201ENST00000439027 IQGAP2Q13576 1575 aa15.66■□□□□ 0.1
AC011228.1-201ENST00000439027 RAPGEF2Q9Y4G8 1499 aa15.65■□□□□ 0.1
AC011228.1-201ENST00000439027 DIP2BQ9P265 1576 aa15.64■□□□□ 0.09
AC011228.1-201ENST00000439027 ABCC2Q92887 1545 aa15.61■□□□□ 0.09
AC011228.1-201ENST00000439027 DCAF8L1A6NGE4 600 aa15.6■□□□□ 0.09
AC011228.1-201ENST00000439027 UACAQ9BZF9 1416 aa15.6■□□□□ 0.09
AC011228.1-201ENST00000439027 DISP1Q96F81 1524 aa15.59■□□□□ 0.09
AC011228.1-201ENST00000439027 TSPOAP1O95153 1857 aa15.59■□□□□ 0.09
AC011228.1-201ENST00000439027 NPM3O75607 178 aaKnown RBP15.58■□□□□ 0.08
AC011228.1-201ENST00000439027 ASXL2Q76L83 1435 aa15.58■□□□□ 0.08
AC011228.1-201ENST00000439027 PLB1Q6P1J6 1458 aa15.57■□□□□ 0.08
AC011228.1-201ENST00000439027 UHRF1BP1LA0JNW5 1464 aa15.56■□□□□ 0.08
AC011228.1-201ENST00000439027 UGGT2Q9NYU1 1516 aa15.56■□□□□ 0.08
AC011228.1-201ENST00000439027 KCNA4P22459 653 aa15.54■□□□□ 0.08
AC011228.1-201ENST00000439027 KDM6BO15054 1643 aa15.54■□□□□ 0.08
AC011228.1-201ENST00000439027 KIAA0556O60303 1618 aa15.51■□□□□ 0.07
AC011228.1-201ENST00000439027 KDM5BQ9UGL1 1544 aa15.48■□□□□ 0.07
AC011228.1-201ENST00000439027 GOLGA3Q08378 1498 aa15.48■□□□□ 0.07
AC011228.1-201ENST00000439027 GLI2P10070 1586 aa15.48■□□□□ 0.07
AC011228.1-201ENST00000439027 FAM9AQ8IZU1 332 aaPredicted RBP15.47■□□□□ 0.07
AC011228.1-201ENST00000439027 PRXQ9BXM0 1461 aa15.46■□□□□ 0.07
AC011228.1-201ENST00000439027 EPRSP07814 1512 aaKnown RBP15.46■□□□□ 0.07
AC011228.1-201ENST00000439027 CTTNBP2Q8WZ74 1663 aa15.45■□□□□ 0.06
AC011228.1-201ENST00000439027 P3H3Q8IVL6 736 aa15.45■□□□□ 0.06
AC011228.1-201ENST00000439027 KCNH8Q96L42 1107 aa15.45■□□□□ 0.06
AC011228.1-201ENST00000439027 ZCCHC11Q5TAX3 1644 aaKnown RBP15.45■□□□□ 0.06
AC011228.1-201ENST00000439027 KDM4FA0A1W2PPD8 638 aa15.44■□□□□ 0.06
AC011228.1-201ENST00000439027 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
AC011228.1-201ENST00000439027 ARID3CA6NKF2 412 aa15.41■□□□□ 0.06
AC011228.1-201ENST00000439027 PPRC1Q5VV67 1664 aaKnown RBP15.41■□□□□ 0.06
AC011228.1-201ENST00000439027 WDR7Q9Y4E6 1490 aa15.4■□□□□ 0.06
AC011228.1-201ENST00000439027 TEX14Q8IWB6 1497 aa15.4■□□□□ 0.06
AC011228.1-201ENST00000439027 RANGAP1P46060 587 aaPredicted RBP15.38■□□□□ 0.05
AC011228.1-201ENST00000439027 ABCA8O94911 1581 aa15.37■□□□□ 0.05
AC011228.1-201ENST00000439027 MAP3K4Q9Y6R4 1608 aa15.37■□□□□ 0.05
AC011228.1-201ENST00000439027 COL17A1Q9UMD9 1497 aaPredicted RBP15.37■□□□□ 0.05
AC011228.1-201ENST00000439027 CD109Q6YHK3 1445 aa15.35■□□□□ 0.05
AC011228.1-201ENST00000439027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.32■□□□□ 0.04
AC011228.1-201ENST00000439027 HNRNPUL2Q1KMD3 747 aaKnown RBP15.32■□□□□ 0.04
AC011228.1-201ENST00000439027 EEA1Q15075 1411 aa15.3■□□□□ 0.04
AC011228.1-201ENST00000439027 ATP10BO94823 1461 aa15.29■□□□□ 0.04
AC011228.1-201ENST00000439027 MAGI3Q5TCQ9 1506 aa15.28■□□□□ 0.04
AC011228.1-201ENST00000439027 ADGRL1O94910 1474 aa15.28■□□□□ 0.04
AC011228.1-201ENST00000439027 CFAP43Q8NDM7 1665 aa15.27■□□□□ 0.03
AC011228.1-201ENST00000439027 EHMT2Q96KQ7 1210 aa15.25■□□□□ 0.03
AC011228.1-201ENST00000439027 SAMD9Q5K651 1589 aa15.24■□□□□ 0.03
AC011228.1-201ENST00000439027 FHOD3Q2V2M9 1422 aa15.23■□□□□ 0.03
AC011228.1-201ENST00000439027 RAPGEF6Q8TEU7 1601 aa15.21■□□□□ 0.03
AC011228.1-201ENST00000439027 PLEKHD1A6NEE1 506 aa15.2■□□□□ 0.02
AC011228.1-201ENST00000439027 UBTFP17480 764 aaKnown RBP15.19■□□□□ 0.02
AC011228.1-201ENST00000439027 NUP153P49790 1475 aaKnown RBP15.18■□□□□ 0.02
AC011228.1-201ENST00000439027 RAPGEF3O95398 923 aa15.17■□□□□ 0.02
AC011228.1-201ENST00000439027 ARAP3Q8WWN8 1544 aa15.17■□□□□ 0.02
AC011228.1-201ENST00000439027 PHLDB1Q86UU1 1377 aa15.16■□□□□ 0.02
AC011228.1-201ENST00000439027 ABCA9Q8IUA7 1624 aa15.15■□□□□ 0.02
AC011228.1-201ENST00000439027 ATP1B4Q9UN42 357 aaPredicted RBP15.15■□□□□ 0.02
AC011228.1-201ENST00000439027 KIF21BO75037 1637 aa15.14■□□□□ 0.01
AC011228.1-201ENST00000439027 RNF39Q9H2S5 420 aa15.14■□□□□ 0.01
AC011228.1-201ENST00000439027 NEO1Q92859 1461 aa15.12■□□□□ 0.01
AC011228.1-201ENST00000439027 EFCAB5A4FU69 1503 aa15.12■□□□□ 0.01
AC011228.1-201ENST00000439027 ARID4BQ4LE39 1312 aaPredicted RBP15.11■□□□□ 0.01
AC011228.1-201ENST00000439027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.06■□□□□ 0
AC011228.1-201ENST00000439027 AKNAQ7Z591 1439 aa15.05■□□□□ -0
AC011228.1-201ENST00000439027 CDK13Q14004 1512 aaKnown RBP15.05■□□□□ -0
AC011228.1-201ENST00000439027 HECW2Q9P2P5 1572 aa15.05■□□□□ -0
AC011228.1-201ENST00000439027 DENND4BO75064 1496 aaPredicted RBP15.04■□□□□ -0
AC011228.1-201ENST00000439027 FANCAO15360 1455 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms