RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 FAM9AQ8IZU1 332 aaPredicted RBP26.98■■□□□ 1.91
SNRPB-202ENST00000438552 SHROOM2Q13796 1616 aa26.96■■□□□ 1.91
SNRPB-202ENST00000438552 CSRNP3Q8WYN3 585 aa26.94■■□□□ 1.9
SNRPB-202ENST00000438552 CTTNBP2Q8WZ74 1663 aa26.92■■□□□ 1.9
SNRPB-202ENST00000438552 KIAA0586Q9BVV6 1533 aa26.9■■□□□ 1.9
SNRPB-202ENST00000438552 KIF21BO75037 1637 aa26.87■■□□□ 1.89
SNRPB-202ENST00000438552 IQGAP2Q13576 1575 aa26.87■■□□□ 1.89
SNRPB-202ENST00000438552 ERCC6L2Q5T890 1561 aa26.86■■□□□ 1.89
SNRPB-202ENST00000438552 ARAP1Q96P48 1450 aa26.8■■□□□ 1.88
SNRPB-202ENST00000438552 PRG4Q92954 1404 aaPredicted RBP26.76■■□□□ 1.87
SNRPB-202ENST00000438552 JPH4Q96JJ6 628 aa26.75■■□□□ 1.87
SNRPB-202ENST00000438552 UGGT2Q9NYU1 1516 aa26.69■■□□□ 1.86
SNRPB-202ENST00000438552 GOLGA3Q08378 1498 aa26.68■■□□□ 1.86
SNRPB-202ENST00000438552 EHMT2Q96KQ7 1210 aa26.65■■□□□ 1.86
SNRPB-202ENST00000438552 KIAA0556O60303 1618 aa26.62■■□□□ 1.85
SNRPB-202ENST00000438552 DISP1Q96F81 1524 aa26.62■■□□□ 1.85
SNRPB-202ENST00000438552 CYB5RLQ6IPT4 315 aa26.61■■□□□ 1.85
SNRPB-202ENST00000438552 CARMIL2Q6F5E8 1435 aa26.58■■□□□ 1.85
SNRPB-202ENST00000438552 SAMD9Q5K651 1589 aa26.52■■□□□ 1.84
SNRPB-202ENST00000438552 UBTFP17480 764 aaKnown RBP26.5■■□□□ 1.83
SNRPB-202ENST00000438552 TNIKQ9UKE5 1360 aa26.48■■□□□ 1.83
SNRPB-202ENST00000438552 TTBK1Q5TCY1 1321 aaPredicted RBP26.43■■□□□ 1.82
SNRPB-202ENST00000438552 PTPRGP23470 1445 aa26.43■■□□□ 1.82
SNRPB-202ENST00000438552 RANGAP1P46060 587 aaPredicted RBP26.43■■□□□ 1.82
SNRPB-202ENST00000438552 ADCY10Q96PN6 1610 aa26.43■■□□□ 1.82
SNRPB-202ENST00000438552 EFCAB5A4FU69 1503 aa26.41■■□□□ 1.82
SNRPB-202ENST00000438552 P3H3Q8IVL6 736 aa26.35■■□□□ 1.81
SNRPB-202ENST00000438552 FHOD3Q2V2M9 1422 aa26.33■■□□□ 1.81
SNRPB-202ENST00000438552 ABCC2Q92887 1545 aa26.3■■□□□ 1.8
SNRPB-202ENST00000438552 ARHGAP35Q9NRY4 1499 aa26.3■■□□□ 1.8
SNRPB-202ENST00000438552 UACAQ9BZF9 1416 aa26.29■■□□□ 1.8
SNRPB-202ENST00000438552 PLB1Q6P1J6 1458 aa26.29■■□□□ 1.8
SNRPB-202ENST00000438552 ABCA8O94911 1581 aa26.29■■□□□ 1.8
SNRPB-202ENST00000438552 UHRF1BP1LA0JNW5 1464 aa26.27■■□□□ 1.8
SNRPB-202ENST00000438552 RAPGEF6Q8TEU7 1601 aa26.22■■□□□ 1.79
SNRPB-202ENST00000438552 LOC105371045A0A1W2PR82 267 aa26.22■■□□□ 1.79
SNRPB-202ENST00000438552 ZCCHC11Q5TAX3 1644 aaKnown RBP26.2■■□□□ 1.78
SNRPB-202ENST00000438552 CLIP1P30622 1438 aa26.19■■□□□ 1.78
SNRPB-202ENST00000438552 CEP162Q5TB80 1403 aa26.15■■□□□ 1.78
SNRPB-202ENST00000438552 MAPKBP1O60336 1514 aa26.15■■□□□ 1.78
SNRPB-202ENST00000438552 KDM5BQ9UGL1 1544 aa26.15■■□□□ 1.78
SNRPB-202ENST00000438552 NPM1P06748 294 aaKnown RBP eCLIP26.12■■□□□ 1.77
SNRPB-202ENST00000438552 FMN1Q68DA7 1419 aa26.09■■□□□ 1.77
SNRPB-202ENST00000438552 NUP153P49790 1475 aaKnown RBP26.08■■□□□ 1.77
SNRPB-202ENST00000438552 PCF11O94913 1555 aaKnown RBP26.07■■□□□ 1.76
SNRPB-202ENST00000438552 KIF13AQ9H1H9 1805 aa26.06■■□□□ 1.76
SNRPB-202ENST00000438552 HECW1Q76N89 1606 aa26.06■■□□□ 1.76
SNRPB-202ENST00000438552 ARID3CA6NKF2 412 aa26.03■■□□□ 1.76
SNRPB-202ENST00000438552 ASXL2Q76L83 1435 aa26.03■■□□□ 1.76
SNRPB-202ENST00000438552 DIP2BQ9P265 1576 aa26.03■■□□□ 1.76
SNRPB-202ENST00000438552 ATP10BO94823 1461 aa26.01■■□□□ 1.75
SNRPB-202ENST00000438552 TRHP20396 242 aaPredicted RBP26.01■■□□□ 1.75
SNRPB-202ENST00000438552 LRRIQ1Q96JM4 1722 aa26.01■■□□□ 1.75
SNRPB-202ENST00000438552 CDK13Q14004 1512 aaKnown RBP25.97■■□□□ 1.75
SNRPB-202ENST00000438552 ABCC10Q5T3U5 1492 aa25.97■■□□□ 1.75
SNRPB-202ENST00000438552 WDR7Q9Y4E6 1490 aa25.96■■□□□ 1.75
SNRPB-202ENST00000438552 FYCO1Q9BQS8 1478 aa25.93■■□□□ 1.74
SNRPB-202ENST00000438552 CASKIN1Q8WXD9 1431 aa25.93■■□□□ 1.74
SNRPB-202ENST00000438552 EPRSP07814 1512 aaKnown RBP25.92■■□□□ 1.74
SNRPB-202ENST00000438552 ATP1B4Q9UN42 357 aaPredicted RBP25.9■■□□□ 1.74
SNRPB-202ENST00000438552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.87■■□□□ 1.73
SNRPB-202ENST00000438552 HNRNPUL2Q1KMD3 747 aaKnown RBP25.87■■□□□ 1.73
SNRPB-202ENST00000438552 GLI2P10070 1586 aa25.86■■□□□ 1.73
SNRPB-202ENST00000438552 AEBP2Q6ZN18 517 aaPredicted RBP25.86■■□□□ 1.73
SNRPB-202ENST00000438552 FAM69CQ0P6D2 419 aa25.85■■□□□ 1.73
SNRPB-202ENST00000438552 TSPOAP1O95153 1857 aa25.84■■□□□ 1.73
SNRPB-202ENST00000438552 CCDC18Q5T9S5 1454 aa25.83■■□□□ 1.73
SNRPB-202ENST00000438552 MAP3K4Q9Y6R4 1608 aa25.81■■□□□ 1.72
SNRPB-202ENST00000438552 VPS8Q8N3P4 1428 aa25.8■■□□□ 1.72
SNRPB-202ENST00000438552 CFAP43Q8NDM7 1665 aa25.78■■□□□ 1.72
SNRPB-202ENST00000438552 PPRC1Q5VV67 1664 aaKnown RBP25.77■■□□□ 1.72
SNRPB-202ENST00000438552 KCNH8Q96L42 1107 aa25.76■■□□□ 1.71
SNRPB-202ENST00000438552 ABCA9Q8IUA7 1624 aa25.75■■□□□ 1.71
SNRPB-202ENST00000438552 MAGI3Q5TCQ9 1506 aa25.73■■□□□ 1.71
SNRPB-202ENST00000438552 PLEKHD1A6NEE1 506 aa25.72■■□□□ 1.71
SNRPB-202ENST00000438552 KIF14Q15058 1648 aa25.71■■□□□ 1.71
SNRPB-202ENST00000438552 TTC37Q6PGP7 1564 aa25.7■■□□□ 1.71
SNRPB-202ENST00000438552 TROQ12816 1431 aaPredicted RBP25.68■■□□□ 1.7
SNRPB-202ENST00000438552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.68■■□□□ 1.72e-7■■■■■ 29.1
SNRPB-202ENST00000438552 CDK11AQ9UQ88 783 aaPredicted RBP25.66■■□□□ 1.7
SNRPB-202ENST00000438552 TIAM1Q13009 1591 aa25.65■■□□□ 1.7
SNRPB-202ENST00000438552 CD109Q6YHK3 1445 aa25.64■■□□□ 1.7
SNRPB-202ENST00000438552 MYO5CQ9NQX4 1742 aa25.6■■□□□ 1.69
SNRPB-202ENST00000438552 TEX14Q8IWB6 1497 aa25.6■■□□□ 1.69
SNRPB-202ENST00000438552 EHBP1L1Q8N3D4 1523 aa25.59■■□□□ 1.69
SNRPB-202ENST00000438552 MTUS2Q5JR59 1369 aa25.56■■□□□ 1.68
SNRPB-202ENST00000438552 KDM6BO15054 1643 aa25.54■■□□□ 1.68
SNRPB-202ENST00000438552 MAP3K1Q13233 1512 aa25.53■■□□□ 1.68
SNRPB-202ENST00000438552 PREX2Q70Z35 1606 aa25.51■■□□□ 1.67
SNRPB-202ENST00000438552 CDC42BPAQ5VT25 1732 aa25.51■■□□□ 1.67
SNRPB-202ENST00000438552 CFAP74Q9C0B2 1584 aa25.5■■□□□ 1.67
SNRPB-202ENST00000438552 SUPT6HQ7KZ85 1726 aaKnown RBP25.49■■□□□ 1.67
SNRPB-202ENST00000438552 CDC42BPBQ9Y5S2 1711 aa25.49■■□□□ 1.67
SNRPB-202ENST00000438552 LRRC9Q6ZRR7 1453 aa25.48■■□□□ 1.67
SNRPB-202ENST00000438552 ARAP3Q8WWN8 1544 aa25.45■■□□□ 1.66
SNRPB-202ENST00000438552 FANCAO15360 1455 aa25.45■■□□□ 1.66
SNRPB-202ENST00000438552 PLCH2O75038 1416 aa25.45■■□□□ 1.66
SNRPB-202ENST00000438552 NEO1Q92859 1461 aa25.44■■□□□ 1.66
SNRPB-202ENST00000438552 ARHGAP5Q13017 1502 aa25.43■■□□□ 1.66
SNRPB-202ENST00000438552 COL17A1Q9UMD9 1497 aaPredicted RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms