RNA–Protein interactions for RNA: ENST00000437086.5

MMP11-204, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 2,071 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-204ENST00000437086 KANK4Q5T7N3 995 aaPredicted RBP28.93■■■□□ 2.22
MMP11-204ENST00000437086 MAP3K1Q13233 1512 aa28.93■■■□□ 2.22
MMP11-204ENST00000437086 PBRM1Q86U86 1689 aa28.91■■■□□ 2.22
MMP11-204ENST00000437086 TIAM1Q13009 1591 aa28.89■■■□□ 2.22
MMP11-204ENST00000437086 P3H3Q8IVL6 736 aa28.86■■■□□ 2.21
MMP11-204ENST00000437086 WDR62O43379 1518 aa28.85■■■□□ 2.21
MMP11-204ENST00000437086 FHOD3Q2V2M9 1422 aa28.83■■■□□ 2.21
MMP11-204ENST00000437086 PCF11O94913 1555 aaKnown RBP28.83■■■□□ 2.21
MMP11-204ENST00000437086 ERCC6Q03468 1493 aa28.83■■■□□ 2.2
MMP11-204ENST00000437086 IFT140Q96RY7 1462 aa28.83■■■□□ 2.2
MMP11-204ENST00000437086 RRBP1Q9P2E9 1410 aaKnown RBP28.8■■■□□ 2.2
MMP11-204ENST00000437086 CFAP43Q8NDM7 1665 aa28.79■■■□□ 2.2
MMP11-204ENST00000437086 FYCO1Q9BQS8 1478 aa28.79■■■□□ 2.2
MMP11-204ENST00000437086 FMN1Q68DA7 1419 aa28.78■■■□□ 2.2
MMP11-204ENST00000437086 ATP1B4Q9UN42 357 aaPredicted RBP28.77■■■□□ 2.2
MMP11-204ENST00000437086 AQRO60306 1485 aaKnown RBP eCLIP28.77■■■□□ 2.26e-9■■□□□ 14
MMP11-204ENST00000437086 GRIN2BQ13224 1484 aa28.77■■■□□ 2.2
MMP11-204ENST00000437086 LRRC9Q6ZRR7 1453 aa28.75■■■□□ 2.19
MMP11-204ENST00000437086 ADAMTS12P58397 1594 aa28.74■■■□□ 2.19
MMP11-204ENST00000437086 CASKIN1Q8WXD9 1431 aa28.73■■■□□ 2.19
MMP11-204ENST00000437086 SAMD9Q5K651 1589 aa28.72■■■□□ 2.19
MMP11-204ENST00000437086 CCNB3Q8WWL7 1395 aa28.72■■■□□ 2.19
MMP11-204ENST00000437086 THOC2Q8NI27 1593 aaKnown RBP28.61■■■□□ 2.17
MMP11-204ENST00000437086 ZNF608Q9ULD9 1512 aaPredicted RBP28.61■■■□□ 2.17
MMP11-204ENST00000437086 IQGAP2Q13576 1575 aa28.61■■■□□ 2.17
MMP11-204ENST00000437086 SNAPC4Q5SXM2 1469 aa28.57■■■□□ 2.16
MMP11-204ENST00000437086 EIF4G3O43432 1585 aaKnown RBP28.57■■■□□ 2.16
MMP11-204ENST00000437086 PHLDB1Q86UU1 1377 aa28.5■■■□□ 2.15
MMP11-204ENST00000437086 ITGAEP38570 1179 aa28.49■■■□□ 2.15
MMP11-204ENST00000437086 MTUS2Q5JR59 1369 aa28.47■■■□□ 2.15
MMP11-204ENST00000437086 CLSPNQ9HAW4 1339 aa28.46■■■□□ 2.15
MMP11-204ENST00000437086 MAGI1Q96QZ7 1491 aaPredicted RBP28.44■■■□□ 2.14
MMP11-204ENST00000437086 FAM50AQ14320 339 aaKnown RBP28.43■■■□□ 2.14
MMP11-204ENST00000437086 GRIN2AQ12879 1464 aa28.42■■■□□ 2.14
MMP11-204ENST00000437086 CCDC18Q5T9S5 1454 aa28.42■■■□□ 2.14
MMP11-204ENST00000437086 UGGT2Q9NYU1 1516 aa28.41■■■□□ 2.14
MMP11-204ENST00000437086 HECW1Q76N89 1606 aa28.41■■■□□ 2.14
MMP11-204ENST00000437086 KIAA0586Q9BVV6 1533 aa28.4■■■□□ 2.14
MMP11-204ENST00000437086 LRRIQ1Q96JM4 1722 aa28.39■■■□□ 2.14
MMP11-204ENST00000437086 DHX57Q6P158 1386 aaKnown RBP28.39■■■□□ 2.13
MMP11-204ENST00000437086 EHBP1L1Q8N3D4 1523 aa28.37■■■□□ 2.13
MMP11-204ENST00000437086 SUPT6HQ7KZ85 1726 aaKnown RBP28.34■■■□□ 2.13
MMP11-204ENST00000437086 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.34■■■□□ 2.13
MMP11-204ENST00000437086 CHMP7Q8WUX9 453 aaPredicted RBP28.33■■■□□ 2.13
MMP11-204ENST00000437086 SYNJ2O15056 1496 aa28.33■■■□□ 2.13
MMP11-204ENST00000437086 FGD6Q6ZV73 1430 aa28.29■■■□□ 2.12
MMP11-204ENST00000437086 SETD5Q9C0A6 1442 aa28.29■■■□□ 2.12
MMP11-204ENST00000437086 KIAA0556O60303 1618 aa28.29■■■□□ 2.12
MMP11-204ENST00000437086 RAB3GAP2Q9H2M9 1393 aa28.27■■■□□ 2.12
MMP11-204ENST00000437086 NCOA2Q15596 1464 aa28.26■■■□□ 2.11
MMP11-204ENST00000437086 ZNF316A6NFI3 1004 aaPredicted RBP28.23■■■□□ 2.11
MMP11-204ENST00000437086 EPRSP07814 1512 aaKnown RBP28.23■■■□□ 2.11
MMP11-204ENST00000437086 FBLN2P98095 1184 aa28.23■■■□□ 2.11
MMP11-204ENST00000437086 MYOM3Q5VTT5 1437 aa28.21■■■□□ 2.11
MMP11-204ENST00000437086 DISP1Q96F81 1524 aa28.2■■■□□ 2.11
MMP11-204ENST00000437086 CEP170Q5SW79 1584 aa28.19■■■□□ 2.1
MMP11-204ENST00000437086 DIEXFQ68CQ4 756 aaKnown RBP28.18■■■□□ 2.1
MMP11-204ENST00000437086 MAGI3Q5TCQ9 1506 aa28.13■■■□□ 2.09
MMP11-204ENST00000437086 CDK13Q14004 1512 aaKnown RBP28.13■■■□□ 2.09
MMP11-204ENST00000437086 RAPGEF6Q8TEU7 1601 aa28.13■■■□□ 2.09
MMP11-204ENST00000437086 CARMIL2Q6F5E8 1435 aa28.12■■■□□ 2.09
MMP11-204ENST00000437086 ARHGEF11O15085 1522 aa28.12■■■□□ 2.09
MMP11-204ENST00000437086 NUP160Q12769 1436 aa28.11■■■□□ 2.09
MMP11-204ENST00000437086 PTPN23Q9H3S7 1636 aa28.1■■■□□ 2.09
MMP11-204ENST00000437086 CDK11AQ9UQ88 783 aaPredicted RBP28.06■■■□□ 2.08
MMP11-204ENST00000437086 ARID3CA6NKF2 412 aa28.04■■■□□ 2.08
MMP11-204ENST00000437086 JPH4Q96JJ6 628 aa28.02■■■□□ 2.08
MMP11-204ENST00000437086 NUP153P49790 1475 aaKnown RBP28.01■■■□□ 2.07
MMP11-204ENST00000437086 TCOF1Q13428 1488 aaKnown RBP27.99■■■□□ 2.07
MMP11-204ENST00000437086 MIA2Q96PC5 1412 aa27.99■■■□□ 2.07
MMP11-204ENST00000437086 MAPKBP1O60336 1514 aa27.99■■■□□ 2.07
MMP11-204ENST00000437086 HFM1A2PYH4 1435 aa27.97■■■□□ 2.07
MMP11-204ENST00000437086 PTPRKQ15262 1439 aa27.91■■■□□ 2.06
MMP11-204ENST00000437086 PLB1Q6P1J6 1458 aa27.89■■■□□ 2.06
MMP11-204ENST00000437086 NAIPQ13075 1403 aa27.86■■■□□ 2.05
MMP11-204ENST00000437086 TROQ12816 1431 aaPredicted RBP27.85■■■□□ 2.05
MMP11-204ENST00000437086 CHD1O14646 1710 aa27.85■■■□□ 2.05
MMP11-204ENST00000437086 UACAQ9BZF9 1416 aa27.84■■■□□ 2.05
MMP11-204ENST00000437086 GCC2Q8IWJ2 1684 aa27.82■■■□□ 2.04
MMP11-204ENST00000437086 AKNAQ7Z591 1439 aa27.81■■■□□ 2.04
MMP11-204ENST00000437086 ITSN2Q9NZM3 1697 aa27.8■■■□□ 2.04
MMP11-204ENST00000437086 TIMELESSQ9UNS1 1208 aa27.8■■■□□ 2.04
MMP11-204ENST00000437086 ABCA8O94911 1581 aa27.79■■■□□ 2.04
MMP11-204ENST00000437086 NEUROD1Q13562 356 aa27.79■■■□□ 2.04
MMP11-204ENST00000437086 PRG4Q92954 1404 aaPredicted RBP27.77■■■□□ 2.04
MMP11-204ENST00000437086 ADCY10Q96PN6 1610 aa27.77■■■□□ 2.04
MMP11-204ENST00000437086 CHIC2Q9UKJ5 165 aa27.77■■■□□ 2.04
MMP11-204ENST00000437086 RRP7BPQ9NSQ0 103 aa27.75■■■□□ 2.03
MMP11-204ENST00000437086 SIN3AQ96ST3 1273 aa27.74■■■□□ 2.03
MMP11-204ENST00000437086 DNMT1P26358 1616 aaKnown RBP27.72■■■□□ 2.03
MMP11-204ENST00000437086 ACIN1Q9UKV3 1341 aaKnown RBP27.71■■■□□ 2.03
MMP11-204ENST00000437086 PLEKHD1A6NEE1 506 aa27.71■■■□□ 2.03
MMP11-204ENST00000437086 PTPRGP23470 1445 aa27.71■■■□□ 2.03
MMP11-204ENST00000437086 DAPK1P53355 1430 aa27.71■■■□□ 2.03
MMP11-204ENST00000437086 KIF14Q15058 1648 aa27.68■■■□□ 2.02
MMP11-204ENST00000437086 CFDP1Q9UEE9 299 aaPredicted RBP27.68■■■□□ 2.02
MMP11-204ENST00000437086 ROCK1Q13464 1354 aa27.66■■■□□ 2.02
MMP11-204ENST00000437086 TRIM52Q96A61 297 aa27.64■■■□□ 2.02
MMP11-204ENST00000437086 ATP10BO94823 1461 aa27.64■■■□□ 2.02
MMP11-204ENST00000437086 SHROOM2Q13796 1616 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms