RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 FAM69CQ0P6D2 419 aa26.48■■□□□ 1.83
HDAC8-213ENST00000436675 RUSC2Q8N2Y8 1516 aa26.47■■□□□ 1.83
HDAC8-213ENST00000436675 NPM1P06748 294 aaKnown RBP eCLIP26.45■■□□□ 1.82
HDAC8-213ENST00000436675 ABCC10Q5T3U5 1492 aa26.41■■□□□ 1.82
HDAC8-213ENST00000436675 ADCY10Q96PN6 1610 aa26.38■■□□□ 1.81
HDAC8-213ENST00000436675 DIP2BQ9P265 1576 aa26.36■■□□□ 1.81
HDAC8-213ENST00000436675 MAPKBP1O60336 1514 aa26.34■■□□□ 1.81
HDAC8-213ENST00000436675 TSPOAP1O95153 1857 aa26.34■■□□□ 1.81
HDAC8-213ENST00000436675 TTBK1Q5TCY1 1321 aaPredicted RBP26.27■■□□□ 1.8
HDAC8-213ENST00000436675 KIAA0586Q9BVV6 1533 aa26.27■■□□□ 1.8
HDAC8-213ENST00000436675 KDM6BO15054 1643 aa26.26■■□□□ 1.79
HDAC8-213ENST00000436675 IGF1RP08069 1367 aa26.24■■□□□ 1.79
HDAC8-213ENST00000436675 KDM4FA0A1W2PPD8 638 aa26.2■■□□□ 1.78
HDAC8-213ENST00000436675 CUL7Q14999 1698 aa26.19■■□□□ 1.78
HDAC8-213ENST00000436675 KIF27Q86VH2 1401 aa26.19■■□□□ 1.78
HDAC8-213ENST00000436675 PTPRGP23470 1445 aa26.15■■□□□ 1.78
HDAC8-213ENST00000436675 CARMIL1Q5VZK9 1371 aa26.07■■□□□ 1.76
HDAC8-213ENST00000436675 TNIKQ9UKE5 1360 aa26.05■■□□□ 1.76
HDAC8-213ENST00000436675 CARMIL2Q6F5E8 1435 aa26.04■■□□□ 1.76
HDAC8-213ENST00000436675 ABCC2Q92887 1545 aa26.04■■□□□ 1.76
HDAC8-213ENST00000436675 ASXL2Q76L83 1435 aa26.02■■□□□ 1.76
HDAC8-213ENST00000436675 PPRC1Q5VV67 1664 aaKnown RBP25.99■■□□□ 1.75
HDAC8-213ENST00000436675 IQGAP2Q13576 1575 aa25.99■■□□□ 1.75
HDAC8-213ENST00000436675 PLB1Q6P1J6 1458 aa25.97■■□□□ 1.75
HDAC8-213ENST00000436675 GLI2P10070 1586 aa25.94■■□□□ 1.74
HDAC8-213ENST00000436675 UACAQ9BZF9 1416 aa25.92■■□□□ 1.74
HDAC8-213ENST00000436675 UHRF1BP1LA0JNW5 1464 aa25.91■■□□□ 1.74
HDAC8-213ENST00000436675 DISP1Q96F81 1524 aa25.89■■□□□ 1.74
HDAC8-213ENST00000436675 ADGRL1O94910 1474 aa25.88■■□□□ 1.73
HDAC8-213ENST00000436675 ILDR1Q86SU0 546 aaPredicted RBP25.86■■□□□ 1.73
HDAC8-213ENST00000436675 COL17A1Q9UMD9 1497 aaPredicted RBP25.85■■□□□ 1.73
HDAC8-213ENST00000436675 EPRSP07814 1512 aaKnown RBP25.84■■□□□ 1.73
HDAC8-213ENST00000436675 ZCCHC11Q5TAX3 1644 aaKnown RBP25.83■■□□□ 1.73
HDAC8-213ENST00000436675 MAP3K4Q9Y6R4 1608 aa25.82■■□□□ 1.72
HDAC8-213ENST00000436675 KDM5BQ9UGL1 1544 aa25.81■■□□□ 1.72
HDAC8-213ENST00000436675 UGGT2Q9NYU1 1516 aa25.78■■□□□ 1.72
HDAC8-213ENST00000436675 RAPGEF2Q9Y4G8 1499 aa25.77■■□□□ 1.72
HDAC8-213ENST00000436675 KIAA0556O60303 1618 aa25.76■■□□□ 1.71
HDAC8-213ENST00000436675 TEX14Q8IWB6 1497 aa25.75■■□□□ 1.71
HDAC8-213ENST00000436675 WDR7Q9Y4E6 1490 aa25.67■■□□□ 1.7
HDAC8-213ENST00000436675 HECW2Q9P2P5 1572 aa25.67■■□□□ 1.7
HDAC8-213ENST00000436675 KCNH8Q96L42 1107 aa25.65■■□□□ 1.7
HDAC8-213ENST00000436675 CTTNBP2Q8WZ74 1663 aa25.63■■□□□ 1.69
HDAC8-213ENST00000436675 CD109Q6YHK3 1445 aa25.59■■□□□ 1.69
HDAC8-213ENST00000436675 CFAP43Q8NDM7 1665 aa25.57■■□□□ 1.68
HDAC8-213ENST00000436675 ABCA8O94911 1581 aa25.54■■□□□ 1.68
HDAC8-213ENST00000436675 GOLGA3Q08378 1498 aa25.53■■□□□ 1.68
HDAC8-213ENST00000436675 MAGI3Q5TCQ9 1506 aa25.53■■□□□ 1.68
HDAC8-213ENST00000436675 ARID3CA6NKF2 412 aa25.52■■□□□ 1.68
HDAC8-213ENST00000436675 KIF21BO75037 1637 aa25.49■■□□□ 1.67
HDAC8-213ENST00000436675 P3H3Q8IVL6 736 aa25.44■■□□□ 1.66
HDAC8-213ENST00000436675 PRXQ9BXM0 1461 aa25.37■■□□□ 1.65
HDAC8-213ENST00000436675 ATP10BO94823 1461 aa25.35■■□□□ 1.65
HDAC8-213ENST00000436675 ARAP3Q8WWN8 1544 aa25.34■■□□□ 1.65
HDAC8-213ENST00000436675 FAM9AQ8IZU1 332 aaPredicted RBP25.34■■□□□ 1.65
HDAC8-213ENST00000436675 RAPGEF3O95398 923 aa25.29■■□□□ 1.64
HDAC8-213ENST00000436675 ABCA9Q8IUA7 1624 aa25.28■■□□□ 1.64
HDAC8-213ENST00000436675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.26■■□□□ 1.63
HDAC8-213ENST00000436675 HNRNPUL2Q1KMD3 747 aaKnown RBP25.26■■□□□ 1.63
HDAC8-213ENST00000436675 ADAMTSL3P82987 1691 aa25.24■■□□□ 1.63
HDAC8-213ENST00000436675 PTPRMP28827 1452 aa25.24■■□□□ 1.63
HDAC8-213ENST00000436675 RAPGEF6Q8TEU7 1601 aa25.22■■□□□ 1.63
HDAC8-213ENST00000436675 ARID4BQ4LE39 1312 aaPredicted RBP25.21■■□□□ 1.63
HDAC8-213ENST00000436675 RANGAP1P46060 587 aaPredicted RBP25.21■■□□□ 1.63
HDAC8-213ENST00000436675 PHLDB1Q86UU1 1377 aa25.2■■□□□ 1.63
HDAC8-213ENST00000436675 FBXO41Q8TF61 875 aa25.19■■□□□ 1.62
HDAC8-213ENST00000436675 SAMD9Q5K651 1589 aa25.18■■□□□ 1.62
HDAC8-213ENST00000436675 NEO1Q92859 1461 aa25.17■■□□□ 1.62
HDAC8-213ENST00000436675 BCORL1Q5H9F3 1711 aa25.17■■□□□ 1.62
HDAC8-213ENST00000436675 MADDQ8WXG6 1647 aa25.16■■□□□ 1.62
HDAC8-213ENST00000436675 FRMPD1Q5SYB0 1578 aa25.16■■□□□ 1.62
HDAC8-213ENST00000436675 CSRNP3Q8WYN3 585 aa25.13■■□□□ 1.61
HDAC8-213ENST00000436675 NUP153P49790 1475 aaKnown RBP25.1■■□□□ 1.61
HDAC8-213ENST00000436675 PLPPR3Q6T4P5 718 aa25.09■■□□□ 1.61
HDAC8-213ENST00000436675 RIMS1Q86UR5 1692 aaKnown RBP25.08■■□□□ 1.61
HDAC8-213ENST00000436675 FHOD3Q2V2M9 1422 aa25.08■■□□□ 1.61
HDAC8-213ENST00000436675 PCF11O94913 1555 aaKnown RBP25.07■■□□□ 1.6
HDAC8-213ENST00000436675 PLEKHD1A6NEE1 506 aa25.04■■□□□ 1.6
HDAC8-213ENST00000436675 RICTORQ6R327 1708 aa25.03■■□□□ 1.6
HDAC8-213ENST00000436675 DENND4BO75064 1496 aaPredicted RBP25.03■■□□□ 1.6
HDAC8-213ENST00000436675 LMTK3Q96Q04 1460 aa25.03■■□□□ 1.6
HDAC8-213ENST00000436675 ARHGEF40Q8TER5 1519 aa25.03■■□□□ 1.6
HDAC8-213ENST00000436675 AKNAQ7Z591 1439 aa25.01■■□□□ 1.59
HDAC8-213ENST00000436675 HSPA2P54652 639 aa24.99■■□□□ 1.59
HDAC8-213ENST00000436675 FANCAO15360 1455 aa24.98■■□□□ 1.59
HDAC8-213ENST00000436675 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.96■■□□□ 1.59
HDAC8-213ENST00000436675 TTC37Q6PGP7 1564 aa24.95■■□□□ 1.58
HDAC8-213ENST00000436675 CFAP74Q9C0B2 1584 aa24.95■■□□□ 1.58
HDAC8-213ENST00000436675 SIGLEC1Q9BZZ2 1709 aa24.95■■□□□ 1.58
HDAC8-213ENST00000436675 MLECQ14165 292 aa24.94■■□□□ 1.58
HDAC8-213ENST00000436675 YEATS2Q9ULM3 1422 aa24.93■■□□□ 1.58
HDAC8-213ENST00000436675 ZFYVE16Q7Z3T8 1539 aa24.91■■□□□ 1.58
HDAC8-213ENST00000436675 POGZQ7Z3K3 1410 aa24.9■■□□□ 1.58
HDAC8-213ENST00000436675 CDK13Q14004 1512 aaKnown RBP24.88■■□□□ 1.57
HDAC8-213ENST00000436675 ZMYM4Q5VZL5 1548 aa24.88■■□□□ 1.57
HDAC8-213ENST00000436675 EFCAB5A4FU69 1503 aa24.87■■□□□ 1.57
HDAC8-213ENST00000436675 HECW1Q76N89 1606 aa24.86■■□□□ 1.57
HDAC8-213ENST00000436675 EEA1Q15075 1411 aa24.86■■□□□ 1.57
HDAC8-213ENST00000436675 FER1L4A9Z1Z3 1794 aa24.85■■□□□ 1.57
HDAC8-213ENST00000436675 EHMT2Q96KQ7 1210 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms