RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 NISCHQ9Y2I1 1504 aa37.61■■■■□ 3.61
HDAC8-213ENST00000436675 ABCC9O60706 1549 aa34.4■■■■□ 3.1
HDAC8-213ENST00000436675 CCDC180Q9P1Z9 1646 aa33.9■■■■□ 3.02
HDAC8-213ENST00000436675 DNAJC5BQ9UF47 199 aa32.62■■■□□ 2.81
HDAC8-213ENST00000436675 RB1CC1Q8TDY2 1594 aa32.48■■■□□ 2.79
HDAC8-213ENST00000436675 NACADO15069 1562 aa32.12■■■□□ 2.73
HDAC8-213ENST00000436675 DCAF8L2P0C7V8 631 aa32.11■■■□□ 2.73
HDAC8-213ENST00000436675 PABPN1Q86U42 306 aaKnown RBP eCLIP32■■■□□ 2.71
HDAC8-213ENST00000436675 UNC13AQ9UPW8 1703 aa31.83■■■□□ 2.69
HDAC8-213ENST00000436675 BICRAQ9NZM4 1560 aa31.57■■■□□ 2.64
HDAC8-213ENST00000436675 MYO15BQ96JP2 1530 aa31.46■■■□□ 2.63
HDAC8-213ENST00000436675 ZCCHC6Q5VYS8 1495 aaKnown RBP31.07■■■□□ 2.56
HDAC8-213ENST00000436675 CC2D2AQ9P2K1 1620 aa31.01■■■□□ 2.55
HDAC8-213ENST00000436675 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
HDAC8-213ENST00000436675 CECR2Q9BXF3 1484 aa30.97■■■□□ 2.55
HDAC8-213ENST00000436675 SHROOM4Q9ULL8 1493 aa30.95■■■□□ 2.55
HDAC8-213ENST00000436675 DCAF1Q9Y4B6 1507 aa30.95■■■□□ 2.55
HDAC8-213ENST00000436675 EIF4G1Q04637 1599 aaKnown RBP30.82■■■□□ 2.52
HDAC8-213ENST00000436675 DNAJC5Q9H3Z4 198 aa30.17■■■□□ 2.42
HDAC8-213ENST00000436675 ERCC6Q03468 1493 aa29.7■■■□□ 2.35
HDAC8-213ENST00000436675 CUX2O14529 1486 aa29.68■■■□□ 2.34
HDAC8-213ENST00000436675 NCAPD3P42695 1498 aa29.66■■■□□ 2.34
HDAC8-213ENST00000436675 ATAD2BQ9ULI0 1458 aa29.55■■■□□ 2.32
HDAC8-213ENST00000436675 SMARCA4P51532 1647 aa29.45■■■□□ 2.31
HDAC8-213ENST00000436675 NESP48681 1621 aa29.45■■■□□ 2.3
HDAC8-213ENST00000436675 SMARCA2P51531 1590 aa29.43■■■□□ 2.3
HDAC8-213ENST00000436675 HMGXB3Q12766 1538 aa29.4■■■□□ 2.3
HDAC8-213ENST00000436675 BAZ1BQ9UIG0 1483 aaKnown RBP29.27■■■□□ 2.28
HDAC8-213ENST00000436675 BAZ1AQ9NRL2 1556 aaPredicted RBP29.21■■■□□ 2.27
HDAC8-213ENST00000436675 THOC2Q8NI27 1593 aaKnown RBP29.15■■■□□ 2.26
HDAC8-213ENST00000436675 PEG3Q9GZU2 1588 aa29.08■■■□□ 2.25
HDAC8-213ENST00000436675 LAMC3Q9Y6N6 1575 aa29.07■■■□□ 2.24
HDAC8-213ENST00000436675 KIF21AQ7Z4S6 1674 aa29.05■■■□□ 2.24
HDAC8-213ENST00000436675 MROH2BQ7Z745 1585 aa29.03■■■□□ 2.24
HDAC8-213ENST00000436675 PDS5BQ9NTI5 1447 aa28.93■■■□□ 2.22
HDAC8-213ENST00000436675 TRIM41Q8WV44 630 aa28.82■■■□□ 2.2
HDAC8-213ENST00000436675 CADPSQ9ULU8 1353 aa28.77■■■□□ 2.2
HDAC8-213ENST00000436675 MRC2Q9UBG0 1479 aa28.72■■■□□ 2.19
HDAC8-213ENST00000436675 WIZO95785 1651 aa28.7■■■□□ 2.19
HDAC8-213ENST00000436675 WDR62O43379 1518 aa28.64■■■□□ 2.17
HDAC8-213ENST00000436675 CEP164Q9UPV0 1460 aa28.53■■■□□ 2.16
HDAC8-213ENST00000436675 FANCD2Q9BXW9 1451 aa28.48■■■□□ 2.15
HDAC8-213ENST00000436675 CFTRP13569 1480 aa28.34■■■□□ 2.13
HDAC8-213ENST00000436675 OSCARQ8IYS5 282 aa28.33■■■□□ 2.13
HDAC8-213ENST00000436675 URB2Q14146 1524 aaKnown RBP28.28■■■□□ 2.12
HDAC8-213ENST00000436675 RSF1Q96T23 1441 aaPredicted RBP28.26■■■□□ 2.11
HDAC8-213ENST00000436675 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
HDAC8-213ENST00000436675 PRDM2Q13029 1718 aa28.08■■■□□ 2.09
HDAC8-213ENST00000436675 RIMBP3CA6NJZ7 1639 aa28.03■■■□□ 2.08
HDAC8-213ENST00000436675 RIMBP3BA6NNM3 1639 aa28.03■■■□□ 2.08
HDAC8-213ENST00000436675 RIMBP3Q9UFD9 1639 aa28.03■■■□□ 2.08
HDAC8-213ENST00000436675 ZNF608Q9ULD9 1512 aaPredicted RBP28.02■■■□□ 2.08
HDAC8-213ENST00000436675 CCDC88BA6NC98 1476 aa27.95■■■□□ 2.07
HDAC8-213ENST00000436675 IFT140Q96RY7 1462 aa27.95■■■□□ 2.07
HDAC8-213ENST00000436675 TOPBP1Q92547 1522 aa27.89■■■□□ 2.06
HDAC8-213ENST00000436675 ARHGEF11O15085 1522 aa27.87■■■□□ 2.05
HDAC8-213ENST00000436675 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
HDAC8-213ENST00000436675 CYB5RLQ6IPT4 315 aa27.76■■■□□ 2.03
HDAC8-213ENST00000436675 ABCC8Q09428 1581 aa27.74■■■□□ 2.03
HDAC8-213ENST00000436675 DNMBPQ6XZF7 1577 aa27.74■■■□□ 2.03
HDAC8-213ENST00000436675 CHD1O14646 1710 aa27.74■■■□□ 2.03
HDAC8-213ENST00000436675 AQRO60306 1485 aaKnown RBP eCLIP27.73■■■□□ 2.03
HDAC8-213ENST00000436675 FBLN2P98095 1184 aa27.69■■■□□ 2.02
HDAC8-213ENST00000436675 TARBP1Q13395 1621 aaKnown RBP27.67■■■□□ 2.02
HDAC8-213ENST00000436675 TRHP20396 242 aaPredicted RBP27.61■■■□□ 2.01
HDAC8-213ENST00000436675 ARAP1Q96P48 1450 aa27.58■■■□□ 2.01
HDAC8-213ENST00000436675 POLA1P09884 1462 aaPredicted RBP27.57■■■□□ 2
HDAC8-213ENST00000436675 RAD54L2Q9Y4B4 1467 aa27.55■■■□□ 2
HDAC8-213ENST00000436675 TDRD9Q8NDG6 1382 aaKnown RBP27.5■■□□□ 1.99
HDAC8-213ENST00000436675 SOGA1O94964 1423 aa27.47■■□□□ 1.99
HDAC8-213ENST00000436675 SNAPC4Q5SXM2 1469 aa27.41■■□□□ 1.98
HDAC8-213ENST00000436675 FGD5Q6ZNL6 1462 aa27.38■■□□□ 1.97
HDAC8-213ENST00000436675 CHMP7Q8WUX9 453 aaPredicted RBP27.35■■□□□ 1.97
HDAC8-213ENST00000436675 CLASP1Q7Z460 1538 aa27.33■■□□□ 1.97
HDAC8-213ENST00000436675 CUX1P39880 1505 aa27.29■■□□□ 1.96
HDAC8-213ENST00000436675 SYNJ1O43426 1573 aa27.29■■□□□ 1.96
HDAC8-213ENST00000436675 WDR97A6NE52 1622 aa27.27■■□□□ 1.96
HDAC8-213ENST00000436675 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
HDAC8-213ENST00000436675 GRIN2BQ13224 1484 aa27.25■■□□□ 1.95
HDAC8-213ENST00000436675 SYNJ2O15056 1496 aa27.19■■□□□ 1.94
HDAC8-213ENST00000436675 PBRM1Q86U86 1689 aa27.17■■□□□ 1.94
HDAC8-213ENST00000436675 GAPVD1Q14C86 1478 aa27.12■■□□□ 1.93
HDAC8-213ENST00000436675 AEBP2Q6ZN18 517 aaPredicted RBP27.08■■□□□ 1.93
HDAC8-213ENST00000436675 ABCA5Q8WWZ7 1642 aa27.01■■□□□ 1.91
HDAC8-213ENST00000436675 ABCA10Q8WWZ4 1543 aa26.99■■□□□ 1.91
HDAC8-213ENST00000436675 ERCC6L2Q5T890 1561 aa26.96■■□□□ 1.91
HDAC8-213ENST00000436675 GRIN2AQ12879 1464 aa26.9■■□□□ 1.9
HDAC8-213ENST00000436675 SUPT5HO00267 1087 aaKnown RBP26.87■■□□□ 1.89
HDAC8-213ENST00000436675 CEP170Q5SW79 1584 aa26.85■■□□□ 1.89
HDAC8-213ENST00000436675 ADAMTS12P58397 1594 aa26.84■■□□□ 1.89
HDAC8-213ENST00000436675 WRNQ14191 1432 aaPredicted RBP eCLIP26.82■■□□□ 1.88
HDAC8-213ENST00000436675 NUP160Q12769 1436 aa26.79■■□□□ 1.88
HDAC8-213ENST00000436675 SHROOM2Q13796 1616 aa26.73■■□□□ 1.87
HDAC8-213ENST00000436675 FHAD1B1AJZ9 1412 aa26.73■■□□□ 1.87
HDAC8-213ENST00000436675 BIVM-ERCC5R4GMW8 1640 aa26.72■■□□□ 1.87
HDAC8-213ENST00000436675 TOP2BQ02880 1626 aa26.72■■□□□ 1.87
HDAC8-213ENST00000436675 KIF13AQ9H1H9 1805 aa26.66■■□□□ 1.86
HDAC8-213ENST00000436675 ERICH3Q5RHP9 1530 aa26.63■■□□□ 1.85
HDAC8-213ENST00000436675 PRG4Q92954 1404 aaPredicted RBP26.63■■□□□ 1.85
HDAC8-213ENST00000436675 JPH4Q96JJ6 628 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms