RNA–Protein interactions for RNA: ENST00000434411.5

SNHG20-202, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 2,143 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-202ENST00000434411 KIF27Q86VH2 1401 aa19.17■□□□□ 0.66
SNHG20-202ENST00000434411 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
SNHG20-202ENST00000434411 CEP170Q5SW79 1584 aa19.15■□□□□ 0.66
SNHG20-202ENST00000434411 NUP160Q12769 1436 aa19.14■□□□□ 0.66
SNHG20-202ENST00000434411 CUL7Q14999 1698 aa19.13■□□□□ 0.65
SNHG20-202ENST00000434411 HRCP23327 699 aa19.12■□□□□ 0.65
SNHG20-202ENST00000434411 PCGF6Q9BYE7 350 aa19.1■□□□□ 0.65
SNHG20-202ENST00000434411 LOC105371045A0A1W2PR82 267 aa19.09■□□□□ 0.65
SNHG20-202ENST00000434411 IGF1RP08069 1367 aa19.08■□□□□ 0.64
SNHG20-202ENST00000434411 SHROOM2Q13796 1616 aa19.07■□□□□ 0.64
SNHG20-202ENST00000434411 RUSC2Q8N2Y8 1516 aa19.01■□□□□ 0.63
SNHG20-202ENST00000434411 FAM9AQ8IZU1 332 aaPredicted RBP19■□□□□ 0.63
SNHG20-202ENST00000434411 ERCC6L2Q5T890 1561 aa18.99■□□□□ 0.63
SNHG20-202ENST00000434411 CARMIL1Q5VZK9 1371 aa18.99■□□□□ 0.63
SNHG20-202ENST00000434411 JPH4Q96JJ6 628 aa18.97■□□□□ 0.63
SNHG20-202ENST00000434411 PRG4Q92954 1404 aaPredicted RBP18.95■□□□□ 0.62
SNHG20-202ENST00000434411 KIAA0586Q9BVV6 1533 aa18.94■□□□□ 0.62
SNHG20-202ENST00000434411 TRHP20396 242 aaPredicted RBP18.89■□□□□ 0.61
SNHG20-202ENST00000434411 EEA1Q15075 1411 aa18.88■□□□□ 0.61
SNHG20-202ENST00000434411 RAPGEF2Q9Y4G8 1499 aa18.87■□□□□ 0.61
SNHG20-202ENST00000434411 IQGAP2Q13576 1575 aa18.83■□□□□ 0.61
SNHG20-202ENST00000434411 CTTNBP2Q8WZ74 1663 aa18.78■□□□□ 0.6
SNHG20-202ENST00000434411 CARMIL2Q6F5E8 1435 aa18.78■□□□□ 0.6
SNHG20-202ENST00000434411 TRIM26Q12899 539 aaPredicted RBP18.76■□□□□ 0.59
SNHG20-202ENST00000434411 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
SNHG20-202ENST00000434411 PRXQ9BXM0 1461 aa18.72■□□□□ 0.59
SNHG20-202ENST00000434411 NPM1P06748 294 aaKnown RBP eCLIP18.72■□□□□ 0.59
SNHG20-202ENST00000434411 PTPRGP23470 1445 aa18.7■□□□□ 0.58
SNHG20-202ENST00000434411 UGGT2Q9NYU1 1516 aa18.7■□□□□ 0.58
SNHG20-202ENST00000434411 TNIKQ9UKE5 1360 aa18.7■□□□□ 0.58
SNHG20-202ENST00000434411 ADCY10Q96PN6 1610 aa18.7■□□□□ 0.58
SNHG20-202ENST00000434411 PPARGC1BQ86YN6 1023 aaKnown RBP18.7■□□□□ 0.58
SNHG20-202ENST00000434411 CSRNP3Q8WYN3 585 aa18.68■□□□□ 0.58
SNHG20-202ENST00000434411 EIF5BO60841 1220 aaKnown RBP18.67■□□□□ 0.58
SNHG20-202ENST00000434411 DISP1Q96F81 1524 aa18.67■□□□□ 0.58
SNHG20-202ENST00000434411 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
SNHG20-202ENST00000434411 KIAA0556O60303 1618 aa18.64■□□□□ 0.57
SNHG20-202ENST00000434411 KIF13AQ9H1H9 1805 aa18.64■□□□□ 0.57
SNHG20-202ENST00000434411 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
SNHG20-202ENST00000434411 GOLGA3Q08378 1498 aa18.61■□□□□ 0.57
SNHG20-202ENST00000434411 AEBP2Q6ZN18 517 aaPredicted RBP18.6■□□□□ 0.57
SNHG20-202ENST00000434411 KIF21BO75037 1637 aa18.6■□□□□ 0.57
SNHG20-202ENST00000434411 UACAQ9BZF9 1416 aa18.57■□□□□ 0.56
SNHG20-202ENST00000434411 UHRF1BP1LA0JNW5 1464 aa18.57■□□□□ 0.56
SNHG20-202ENST00000434411 ABCC2Q92887 1545 aa18.56■□□□□ 0.56
SNHG20-202ENST00000434411 ABCC10Q5T3U5 1492 aa18.55■□□□□ 0.56
SNHG20-202ENST00000434411 CEP162Q5TB80 1403 aa18.53■□□□□ 0.56
SNHG20-202ENST00000434411 DIP2BQ9P265 1576 aa18.53■□□□□ 0.56
SNHG20-202ENST00000434411 FAM69CQ0P6D2 419 aa18.52■□□□□ 0.56
SNHG20-202ENST00000434411 UBTFP17480 764 aaKnown RBP18.48■□□□□ 0.55
SNHG20-202ENST00000434411 ZCCHC11Q5TAX3 1644 aaKnown RBP18.48■□□□□ 0.55
SNHG20-202ENST00000434411 KDM5BQ9UGL1 1544 aa18.48■□□□□ 0.55
SNHG20-202ENST00000434411 PLB1Q6P1J6 1458 aa18.47■□□□□ 0.55
SNHG20-202ENST00000434411 SAMD9Q5K651 1589 aa18.46■□□□□ 0.55
SNHG20-202ENST00000434411 ASXL2Q76L83 1435 aa18.46■□□□□ 0.55
SNHG20-202ENST00000434411 TSPOAP1O95153 1857 aa18.45■□□□□ 0.54
SNHG20-202ENST00000434411 ABCA8O94911 1581 aa18.44■□□□□ 0.54
SNHG20-202ENST00000434411 P3H3Q8IVL6 736 aa18.43■□□□□ 0.54
SNHG20-202ENST00000434411 GLI2P10070 1586 aa18.39■□□□□ 0.54
SNHG20-202ENST00000434411 RANGAP1P46060 587 aaPredicted RBP18.38■□□□□ 0.53
SNHG20-202ENST00000434411 ZEB1P37275 1124 aaPredicted RBP18.38■□□□□ 0.53
SNHG20-202ENST00000434411 EFCAB5A4FU69 1503 aa18.35■□□□□ 0.53
SNHG20-202ENST00000434411 RAPGEF6Q8TEU7 1601 aa18.35■□□□□ 0.53
SNHG20-202ENST00000434411 EPRSP07814 1512 aaKnown RBP18.35■□□□□ 0.53
SNHG20-202ENST00000434411 WDR7Q9Y4E6 1490 aa18.34■□□□□ 0.53
SNHG20-202ENST00000434411 PLEKHG5O94827 1062 aa18.32■□□□□ 0.52
SNHG20-202ENST00000434411 MAP3K4Q9Y6R4 1608 aa18.32■□□□□ 0.52
SNHG20-202ENST00000434411 KDM6BO15054 1643 aa18.32■□□□□ 0.52
SNHG20-202ENST00000434411 PPRC1Q5VV67 1664 aaKnown RBP18.31■□□□□ 0.52
SNHG20-202ENST00000434411 FHOD3Q2V2M9 1422 aa18.3■□□□□ 0.52
SNHG20-202ENST00000434411 CLIP1P30622 1438 aa18.3■□□□□ 0.52
SNHG20-202ENST00000434411 CFAP43Q8NDM7 1665 aa18.27■□□□□ 0.52
SNHG20-202ENST00000434411 ATP10BO94823 1461 aa18.27■□□□□ 0.52
SNHG20-202ENST00000434411 ARID3CA6NKF2 412 aa18.26■□□□□ 0.51
SNHG20-202ENST00000434411 KCNH8Q96L42 1107 aa18.26■□□□□ 0.51
SNHG20-202ENST00000434411 TEX14Q8IWB6 1497 aa18.26■□□□□ 0.51
SNHG20-202ENST00000434411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.24■□□□□ 0.51
SNHG20-202ENST00000434411 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
SNHG20-202ENST00000434411 NUP153P49790 1475 aaKnown RBP18.21■□□□□ 0.51
SNHG20-202ENST00000434411 VPS8Q8N3P4 1428 aa18.2■□□□□ 0.5
SNHG20-202ENST00000434411 CD109Q6YHK3 1445 aa18.2■□□□□ 0.5
SNHG20-202ENST00000434411 CENPBP07199 599 aaPredicted RBP18.19■□□□□ 0.5
SNHG20-202ENST00000434411 ARHGAP35Q9NRY4 1499 aa18.18■□□□□ 0.5
SNHG20-202ENST00000434411 FMN1Q68DA7 1419 aa18.18■□□□□ 0.5
SNHG20-202ENST00000434411 MAGI3Q5TCQ9 1506 aa18.17■□□□□ 0.5
SNHG20-202ENST00000434411 NCBP3Q53F19 620 aaKnown RBP18.17■□□□□ 0.5
SNHG20-202ENST00000434411 ABCA9Q8IUA7 1624 aa18.16■□□□□ 0.5
SNHG20-202ENST00000434411 PLEKHD1A6NEE1 506 aa18.14■□□□□ 0.5
SNHG20-202ENST00000434411 HECW1Q76N89 1606 aa18.14■□□□□ 0.49
SNHG20-202ENST00000434411 ATP1B4Q9UN42 357 aaPredicted RBP18.11■□□□□ 0.49
SNHG20-202ENST00000434411 COL17A1Q9UMD9 1497 aaPredicted RBP18.09■□□□□ 0.49
SNHG20-202ENST00000434411 CDK13Q14004 1512 aaKnown RBP18.08■□□□□ 0.48
SNHG20-202ENST00000434411 PHLDB1Q86UU1 1377 aa18.05■□□□□ 0.48
SNHG20-202ENST00000434411 CDK11AQ9UQ88 783 aaPredicted RBP18.05■□□□□ 0.48
SNHG20-202ENST00000434411 LRRIQ1Q96JM4 1722 aa18.03■□□□□ 0.48
SNHG20-202ENST00000434411 ARAP3Q8WWN8 1544 aa18.02■□□□□ 0.48
SNHG20-202ENST00000434411 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.02■□□□□ 0.48
SNHG20-202ENST00000434411 NEO1Q92859 1461 aa18.02■□□□□ 0.47
SNHG20-202ENST00000434411 CFAP74Q9C0B2 1584 aa18■□□□□ 0.47
SNHG20-202ENST00000434411 UBE2Q2Q8WVN8 375 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms