RNA–Protein interactions for RNA: ENST00000434411.5

SNHG20-202, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 2,143 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-202ENST00000434411 NISCHQ9Y2I1 1504 aa27.3■■□□□ 1.96
SNHG20-202ENST00000434411 CCDC180Q9P1Z9 1646 aa24.42■■□□□ 1.5
SNHG20-202ENST00000434411 ABCC9O60706 1549 aa23.99■■□□□ 1.43
SNHG20-202ENST00000434411 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
SNHG20-202ENST00000434411 NACADO15069 1562 aa22.97■■□□□ 1.27
SNHG20-202ENST00000434411 DCAF8L2P0C7V8 631 aa22.91■■□□□ 1.26
SNHG20-202ENST00000434411 MYO15BQ96JP2 1530 aa22.76■■□□□ 1.23
SNHG20-202ENST00000434411 ZCCHC6Q5VYS8 1495 aaKnown RBP22.69■■□□□ 1.22
SNHG20-202ENST00000434411 DCAF1Q9Y4B6 1507 aa22.59■■□□□ 1.21
SNHG20-202ENST00000434411 UNC13AQ9UPW8 1703 aa22.57■■□□□ 1.2
SNHG20-202ENST00000434411 PABPN1Q86U42 306 aaKnown RBP eCLIP22.36■■□□□ 1.17
SNHG20-202ENST00000434411 BICRAQ9NZM4 1560 aa22.31■■□□□ 1.16
SNHG20-202ENST00000434411 SCRIBQ14160 1630 aa22.22■■□□□ 1.15
SNHG20-202ENST00000434411 DNAJC5BQ9UF47 199 aa22.13■■□□□ 1.13
SNHG20-202ENST00000434411 SHROOM4Q9ULL8 1493 aa22.1■■□□□ 1.13
SNHG20-202ENST00000434411 EIF4G1Q04637 1599 aaKnown RBP21.76■■□□□ 1.07
SNHG20-202ENST00000434411 CC2D2AQ9P2K1 1620 aa21.73■■□□□ 1.07
SNHG20-202ENST00000434411 CECR2Q9BXF3 1484 aa21.59■■□□□ 1.05
SNHG20-202ENST00000434411 SMARCA4P51532 1647 aa21.25■□□□□ 0.99
SNHG20-202ENST00000434411 BAZ1AQ9NRL2 1556 aaPredicted RBP21.2■□□□□ 0.98
SNHG20-202ENST00000434411 PELP1Q8IZL8 1130 aaKnown RBP21.17■□□□□ 0.98
SNHG20-202ENST00000434411 NCAPD3P42695 1498 aa21.17■□□□□ 0.98
SNHG20-202ENST00000434411 SMARCA2P51531 1590 aa21.15■□□□□ 0.98
SNHG20-202ENST00000434411 ATAD2BQ9ULI0 1458 aa21.13■□□□□ 0.97
SNHG20-202ENST00000434411 HMGXB3Q12766 1538 aa21.07■□□□□ 0.96
SNHG20-202ENST00000434411 MYT1Q01538 1121 aa21.04■□□□□ 0.96
SNHG20-202ENST00000434411 PEG3Q9GZU2 1588 aa21.03■□□□□ 0.96
SNHG20-202ENST00000434411 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.96
SNHG20-202ENST00000434411 BAZ1BQ9UIG0 1483 aaKnown RBP20.98■□□□□ 0.95
SNHG20-202ENST00000434411 WIZO95785 1651 aa20.83■□□□□ 0.93
SNHG20-202ENST00000434411 ERCC6Q03468 1493 aa20.73■□□□□ 0.91
SNHG20-202ENST00000434411 RSF1Q96T23 1441 aaPredicted RBP20.7■□□□□ 0.9
SNHG20-202ENST00000434411 NESP48681 1621 aa20.7■□□□□ 0.9
SNHG20-202ENST00000434411 LAMC3Q9Y6N6 1575 aa20.69■□□□□ 0.9
SNHG20-202ENST00000434411 TOP2AP11388 1531 aaKnown RBP20.58■□□□□ 0.88
SNHG20-202ENST00000434411 CUX2O14529 1486 aa20.57■□□□□ 0.88
SNHG20-202ENST00000434411 SUPT5HO00267 1087 aaKnown RBP20.57■□□□□ 0.88
SNHG20-202ENST00000434411 SLC24A1O60721 1099 aa20.54■□□□□ 0.88
SNHG20-202ENST00000434411 CADPSQ9ULU8 1353 aa20.54■□□□□ 0.88
SNHG20-202ENST00000434411 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
SNHG20-202ENST00000434411 KIF21AQ7Z4S6 1674 aa20.52■□□□□ 0.88
SNHG20-202ENST00000434411 TTBK1Q5TCY1 1321 aaPredicted RBP20.51■□□□□ 0.87
SNHG20-202ENST00000434411 THOC2Q8NI27 1593 aaKnown RBP20.46■□□□□ 0.87
SNHG20-202ENST00000434411 CFTRP13569 1480 aa20.37■□□□□ 0.85
SNHG20-202ENST00000434411 PRDM2Q13029 1718 aa20.33■□□□□ 0.85
SNHG20-202ENST00000434411 CEP164Q9UPV0 1460 aa20.32■□□□□ 0.84
SNHG20-202ENST00000434411 CCDC88BA6NC98 1476 aa20.32■□□□□ 0.84
SNHG20-202ENST00000434411 MRC2Q9UBG0 1479 aa20.32■□□□□ 0.84
SNHG20-202ENST00000434411 FANCD2Q9BXW9 1451 aa20.3■□□□□ 0.84
SNHG20-202ENST00000434411 PRKCSHP14314 528 aaPredicted RBP20.29■□□□□ 0.84
SNHG20-202ENST00000434411 WDR62O43379 1518 aa20.25■□□□□ 0.83
SNHG20-202ENST00000434411 DNAJC5Q9H3Z4 198 aa20.13■□□□□ 0.81
SNHG20-202ENST00000434411 URB2Q14146 1524 aaKnown RBP20.1■□□□□ 0.81
SNHG20-202ENST00000434411 ABCC8Q09428 1581 aa20■□□□□ 0.79
SNHG20-202ENST00000434411 TOPBP1Q92547 1522 aa19.97■□□□□ 0.79
SNHG20-202ENST00000434411 DNMBPQ6XZF7 1577 aa19.95■□□□□ 0.78
SNHG20-202ENST00000434411 APLP2Q06481 763 aa19.93■□□□□ 0.78
SNHG20-202ENST00000434411 IFT140Q96RY7 1462 aa19.89■□□□□ 0.77
SNHG20-202ENST00000434411 CHIC1Q5VXU3 224 aa19.87■□□□□ 0.77
SNHG20-202ENST00000434411 ZNF608Q9ULD9 1512 aaPredicted RBP19.78■□□□□ 0.76
SNHG20-202ENST00000434411 TARBP1Q13395 1621 aaKnown RBP19.77■□□□□ 0.76
SNHG20-202ENST00000434411 POLA1P09884 1462 aaPredicted RBP19.77■□□□□ 0.76
SNHG20-202ENST00000434411 EIF4G3O43432 1585 aaKnown RBP19.75■□□□□ 0.75
SNHG20-202ENST00000434411 ERICH6Q7L0X2 663 aa19.73■□□□□ 0.75
SNHG20-202ENST00000434411 CUX1P39880 1505 aa19.73■□□□□ 0.75
SNHG20-202ENST00000434411 FGD5Q6ZNL6 1462 aa19.71■□□□□ 0.75
SNHG20-202ENST00000434411 SOGA1O94964 1423 aa19.71■□□□□ 0.75
SNHG20-202ENST00000434411 OSCARQ8IYS5 282 aa19.7■□□□□ 0.74
SNHG20-202ENST00000434411 RAD54L2Q9Y4B4 1467 aa19.68■□□□□ 0.74
SNHG20-202ENST00000434411 AQRO60306 1485 aaKnown RBP eCLIP19.66■□□□□ 0.743e-10■■□□□ 14.3
SNHG20-202ENST00000434411 WDR97A6NE52 1622 aa19.65■□□□□ 0.74
SNHG20-202ENST00000434411 TDRD9Q8NDG6 1382 aaKnown RBP19.59■□□□□ 0.73
SNHG20-202ENST00000434411 CHD1O14646 1710 aa19.58■□□□□ 0.72
SNHG20-202ENST00000434411 BIVM-ERCC5R4GMW8 1640 aa19.57■□□□□ 0.72
SNHG20-202ENST00000434411 WRNQ14191 1432 aaPredicted RBP eCLIP19.56■□□□□ 0.72
SNHG20-202ENST00000434411 TOP2BQ02880 1626 aa19.56■□□□□ 0.72
SNHG20-202ENST00000434411 SYNJ1O43426 1573 aa19.51■□□□□ 0.71
SNHG20-202ENST00000434411 PBRM1Q86U86 1689 aa19.51■□□□□ 0.71
SNHG20-202ENST00000434411 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
SNHG20-202ENST00000434411 GRIN2BQ13224 1484 aa19.5■□□□□ 0.71
SNHG20-202ENST00000434411 FBLN2P98095 1184 aa19.5■□□□□ 0.71
SNHG20-202ENST00000434411 GAPVD1Q14C86 1478 aa19.48■□□□□ 0.71
SNHG20-202ENST00000434411 SNAPC4Q5SXM2 1469 aa19.48■□□□□ 0.71
SNHG20-202ENST00000434411 MAGI1Q96QZ7 1491 aaPredicted RBP19.48■□□□□ 0.71
SNHG20-202ENST00000434411 ABCA5Q8WWZ7 1642 aa19.46■□□□□ 0.71
SNHG20-202ENST00000434411 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
SNHG20-202ENST00000434411 DAXXQ9UER7 740 aaPredicted RBP19.42■□□□□ 0.7
SNHG20-202ENST00000434411 RIMBP3CA6NJZ7 1639 aa19.41■□□□□ 0.7
SNHG20-202ENST00000434411 RIMBP3BA6NNM3 1639 aa19.41■□□□□ 0.7
SNHG20-202ENST00000434411 RIMBP3Q9UFD9 1639 aa19.41■□□□□ 0.7
SNHG20-202ENST00000434411 TRIM41Q8WV44 630 aa19.4■□□□□ 0.7
SNHG20-202ENST00000434411 SYNJ2O15056 1496 aa19.4■□□□□ 0.7
SNHG20-202ENST00000434411 ARHGEF11O15085 1522 aa19.35■□□□□ 0.69
SNHG20-202ENST00000434411 ERICH3Q5RHP9 1530 aa19.3■□□□□ 0.68
SNHG20-202ENST00000434411 CLASP1Q7Z460 1538 aa19.29■□□□□ 0.68
SNHG20-202ENST00000434411 ADAMTS12P58397 1594 aa19.28■□□□□ 0.68
SNHG20-202ENST00000434411 BCL11AQ9H165 835 aa19.24■□□□□ 0.67
SNHG20-202ENST00000434411 GRIN2AQ12879 1464 aa19.24■□□□□ 0.67
SNHG20-202ENST00000434411 FHAD1B1AJZ9 1412 aa19.24■□□□□ 0.67
SNHG20-202ENST00000434411 CYB5RLQ6IPT4 315 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms