RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 KIF27Q86VH2 1401 aa21.92■■□□□ 1.1
DDX56-205ENST00000433257 ABCA5Q8WWZ7 1642 aa21.92■■□□□ 1.1
DDX56-205ENST00000433257 FBLN2P98095 1184 aa21.91■■□□□ 1.1
DDX56-205ENST00000433257 CLSPNQ9HAW4 1339 aa21.9■■□□□ 1.1
DDX56-205ENST00000433257 SNAPC4Q5SXM2 1469 aa21.88■■□□□ 1.09
DDX56-205ENST00000433257 CHMP7Q8WUX9 453 aaPredicted RBP21.88■■□□□ 1.09
DDX56-205ENST00000433257 MAGI1Q96QZ7 1491 aaPredicted RBP21.86■■□□□ 1.09
DDX56-205ENST00000433257 PBRM1Q86U86 1689 aa21.86■■□□□ 1.09
DDX56-205ENST00000433257 APLP2Q06481 763 aa21.85■■□□□ 1.09
DDX56-205ENST00000433257 OSCARQ8IYS5 282 aa21.85■■□□□ 1.09
DDX56-205ENST00000433257 ERICH3Q5RHP9 1530 aa21.83■■□□□ 1.08
DDX56-205ENST00000433257 IGF1RP08069 1367 aa21.8■■□□□ 1.08
DDX56-205ENST00000433257 SYNJ2O15056 1496 aa21.79■■□□□ 1.08
DDX56-205ENST00000433257 FHAD1B1AJZ9 1412 aa21.76■■□□□ 1.07
DDX56-205ENST00000433257 TTBK1Q5TCY1 1321 aaPredicted RBP21.74■■□□□ 1.07
DDX56-205ENST00000433257 DNAJC5Q9H3Z4 198 aa21.72■■□□□ 1.07
DDX56-205ENST00000433257 CHD1O14646 1710 aa21.71■■□□□ 1.07
DDX56-205ENST00000433257 ADAMTS12P58397 1594 aa21.7■■□□□ 1.06
DDX56-205ENST00000433257 CARMIL1Q5VZK9 1371 aa21.69■■□□□ 1.06
DDX56-205ENST00000433257 RAPGEF2Q9Y4G8 1499 aa21.68■■□□□ 1.06
DDX56-205ENST00000433257 GRIN2AQ12879 1464 aa21.66■■□□□ 1.06
DDX56-205ENST00000433257 CUL7Q14999 1698 aa21.66■■□□□ 1.06
DDX56-205ENST00000433257 HNRNPUL2Q1KMD3 747 aaKnown RBP21.63■■□□□ 1.05
DDX56-205ENST00000433257 PRXQ9BXM0 1461 aa21.61■■□□□ 1.05
DDX56-205ENST00000433257 MIER1Q8N108 512 aa21.56■■□□□ 1.04
DDX56-205ENST00000433257 NUP160Q12769 1436 aa21.54■■□□□ 1.04
DDX56-205ENST00000433257 RRBP1Q9P2E9 1410 aaKnown RBP21.53■■□□□ 1.04
DDX56-205ENST00000433257 CEP170Q5SW79 1584 aa21.51■■□□□ 1.03
DDX56-205ENST00000433257 ARAP1Q96P48 1450 aa21.5■■□□□ 1.03
DDX56-205ENST00000433257 DHX57Q6P158 1386 aaKnown RBP21.49■■□□□ 1.03
DDX56-205ENST00000433257 CLASP1Q7Z460 1538 aa21.49■■□□□ 1.03
DDX56-205ENST00000433257 YTHDC1Q96MU7 727 aaKnown RBP21.45■■□□□ 1.02
DDX56-205ENST00000433257 JPH4Q96JJ6 628 aa21.44■■□□□ 1.02
DDX56-205ENST00000433257 MAP3K1Q13233 1512 aa21.43■■□□□ 1.02
DDX56-205ENST00000433257 KIAA0586Q9BVV6 1533 aa21.43■■□□□ 1.02
DDX56-205ENST00000433257 ARHGEF11O15085 1522 aa21.36■■□□□ 1.01
DDX56-205ENST00000433257 CCNB3Q8WWL7 1395 aa21.34■■□□□ 1.01
DDX56-205ENST00000433257 PRG4Q92954 1404 aaPredicted RBP21.32■■□□□ 1
DDX56-205ENST00000433257 RIMBP3CA6NJZ7 1639 aa21.32■■□□□ 1
DDX56-205ENST00000433257 RIMBP3BA6NNM3 1639 aa21.32■■□□□ 1
DDX56-205ENST00000433257 RIMBP3Q9UFD9 1639 aa21.32■■□□□ 1
DDX56-205ENST00000433257 IQGAP2Q13576 1575 aa21.31■■□□□ 1
DDX56-205ENST00000433257 SHROOM2Q13796 1616 aa21.3■■□□□ 1
DDX56-205ENST00000433257 CYB5RLQ6IPT4 315 aa21.28■■□□□ 1
DDX56-205ENST00000433257 ARHGAP35Q9NRY4 1499 aa21.26■□□□□ 0.99
DDX56-205ENST00000433257 CTTNBP2Q8WZ74 1663 aa21.26■□□□□ 0.99
DDX56-205ENST00000433257 CARMIL2Q6F5E8 1435 aa21.26■□□□□ 0.99
DDX56-205ENST00000433257 TIAM1Q13009 1591 aa21.22■□□□□ 0.99
DDX56-205ENST00000433257 ERCC6L2Q5T890 1561 aa21.22■□□□□ 0.99
DDX56-205ENST00000433257 RANGAP1P46060 587 aaPredicted RBP21.21■□□□□ 0.99
DDX56-205ENST00000433257 TIMELESSQ9UNS1 1208 aa21.21■□□□□ 0.99
DDX56-205ENST00000433257 KANK4Q5T7N3 995 aaPredicted RBP21.2■□□□□ 0.98
DDX56-205ENST00000433257 UGGT2Q9NYU1 1516 aa21.2■□□□□ 0.98
DDX56-205ENST00000433257 DISP1Q96F81 1524 aa21.14■□□□□ 0.97
DDX56-205ENST00000433257 CFAP43Q8NDM7 1665 aa21.13■□□□□ 0.97
DDX56-205ENST00000433257 PTPRGP23470 1445 aa21.13■□□□□ 0.97
DDX56-205ENST00000433257 P3H3Q8IVL6 736 aa21.12■□□□□ 0.97
DDX56-205ENST00000433257 SETD5Q9C0A6 1442 aa21.12■□□□□ 0.97
DDX56-205ENST00000433257 SUPT16HQ9Y5B9 1047 aaKnown RBP21.12■□□□□ 0.97
DDX56-205ENST00000433257 RAB3GAP2Q9H2M9 1393 aa21.09■□□□□ 0.97
DDX56-205ENST00000433257 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.09■□□□□ 0.97
DDX56-205ENST00000433257 KIAA0556O60303 1618 aa21.09■□□□□ 0.97
DDX56-205ENST00000433257 LRRC9Q6ZRR7 1453 aa21.09■□□□□ 0.97
DDX56-205ENST00000433257 MAPKBP1O60336 1514 aa21.08■□□□□ 0.97
DDX56-205ENST00000433257 EFCAB5A4FU69 1503 aa21.03■□□□□ 0.96
DDX56-205ENST00000433257 NPM1P06748 294 aaKnown RBP eCLIP21.02■□□□□ 0.95
DDX56-205ENST00000433257 SAMD9Q5K651 1589 aa21.01■□□□□ 0.95
DDX56-205ENST00000433257 FYCO1Q9BQS8 1478 aa20.98■□□□□ 0.95
DDX56-205ENST00000433257 UACAQ9BZF9 1416 aa20.96■□□□□ 0.95
DDX56-205ENST00000433257 FHOD3Q2V2M9 1422 aa20.96■□□□□ 0.95
DDX56-205ENST00000433257 CCER2I3L3R5 266 aa20.93■□□□□ 0.94
DDX56-205ENST00000433257 PCF11O94913 1555 aaKnown RBP20.91■□□□□ 0.94
DDX56-205ENST00000433257 PLB1Q6P1J6 1458 aa20.9■□□□□ 0.94
DDX56-205ENST00000433257 UHRF1BP1LA0JNW5 1464 aa20.89■□□□□ 0.93
DDX56-205ENST00000433257 CASKIN1Q8WXD9 1431 aa20.89■□□□□ 0.93
DDX56-205ENST00000433257 ADCY10Q96PN6 1610 aa20.89■□□□□ 0.93
DDX56-205ENST00000433257 PHLDB1Q86UU1 1377 aa20.88■□□□□ 0.93
DDX56-205ENST00000433257 ABCC2Q92887 1545 aa20.87■□□□□ 0.93
DDX56-205ENST00000433257 FMN1Q68DA7 1419 aa20.87■□□□□ 0.93
DDX56-205ENST00000433257 ITGAEP38570 1179 aa20.84■□□□□ 0.93
DDX56-205ENST00000433257 ATP1B4Q9UN42 357 aaPredicted RBP20.84■□□□□ 0.93
DDX56-205ENST00000433257 ABCA8O94911 1581 aa20.83■□□□□ 0.93
DDX56-205ENST00000433257 NEFLP07196 543 aa20.83■□□□□ 0.92
DDX56-205ENST00000433257 TSHZ2Q9NRE2 1034 aa20.83■□□□□ 0.92
DDX56-205ENST00000433257 TRHP20396 242 aaPredicted RBP20.82■□□□□ 0.92
DDX56-205ENST00000433257 ARID3CA6NKF2 412 aa20.8■□□□□ 0.92
DDX56-205ENST00000433257 PPP1R15AO75807 674 aaPredicted RBP20.8■□□□□ 0.92
DDX56-205ENST00000433257 RAPGEF6Q8TEU7 1601 aa20.79■□□□□ 0.92
DDX56-205ENST00000433257 KDM5BQ9UGL1 1544 aa20.79■□□□□ 0.92
DDX56-205ENST00000433257 ANP32CO43423 234 aa20.78■□□□□ 0.92
DDX56-205ENST00000433257 FAM50AQ14320 339 aaKnown RBP20.78■□□□□ 0.92
DDX56-205ENST00000433257 ANP32EQ9BTT0 268 aa20.75■□□□□ 0.91
DDX56-205ENST00000433257 FGD6Q6ZV73 1430 aa20.74■□□□□ 0.91
DDX56-205ENST00000433257 ATP10BO94823 1461 aa20.73■□□□□ 0.91
DDX56-205ENST00000433257 HFM1A2PYH4 1435 aa20.72■□□□□ 0.91
DDX56-205ENST00000433257 NUP153P49790 1475 aaKnown RBP20.72■□□□□ 0.91
DDX56-205ENST00000433257 ZCCHC11Q5TAX3 1644 aaKnown RBP20.72■□□□□ 0.91
DDX56-205ENST00000433257 TONSLQ96HA7 1378 aa20.72■□□□□ 0.91
DDX56-205ENST00000433257 DDX10Q13206 875 aaKnown RBP20.71■□□□□ 0.91
DDX56-205ENST00000433257 ASXL2Q76L83 1435 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms