RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 PELP1Q8IZL8 1130 aaKnown RBP16.95■□□□□ 0.3
SMPD4-205ENST00000431183 KIF21BO75037 1637 aa16.94■□□□□ 0.3
SMPD4-205ENST00000431183 ZNF777Q9ULD5 760 aaPredicted RBP16.94■□□□□ 0.3
SMPD4-205ENST00000431183 ARHGAP35Q9NRY4 1499 aa16.91■□□□□ 0.3
SMPD4-205ENST00000431183 CHIC2Q9UKJ5 165 aa16.91■□□□□ 0.3
SMPD4-205ENST00000431183 SNAPC4Q5SXM2 1469 aa16.91■□□□□ 0.3
SMPD4-205ENST00000431183 JPH4Q96JJ6 628 aa16.89■□□□□ 0.29
SMPD4-205ENST00000431183 PRDM2Q13029 1718 aa16.86■□□□□ 0.29
SMPD4-205ENST00000431183 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
SMPD4-205ENST00000431183 MTUS2Q5JR59 1369 aa16.86■□□□□ 0.29
SMPD4-205ENST00000431183 KCNH8Q96L42 1107 aa16.85■□□□□ 0.29
SMPD4-205ENST00000431183 IFT140Q96RY7 1462 aa16.85■□□□□ 0.29
SMPD4-205ENST00000431183 ERICH3Q5RHP9 1530 aa16.82■□□□□ 0.28
SMPD4-205ENST00000431183 FHAD1B1AJZ9 1412 aa16.81■□□□□ 0.28
SMPD4-205ENST00000431183 NEUROD1Q13562 356 aa16.76■□□□□ 0.27
SMPD4-205ENST00000431183 MYT1LQ9UL68 1186 aa16.75■□□□□ 0.27
SMPD4-205ENST00000431183 RRP7BPQ9NSQ0 103 aa16.74■□□□□ 0.27
SMPD4-205ENST00000431183 TARBP1Q13395 1621 aaKnown RBP16.73■□□□□ 0.27
SMPD4-205ENST00000431183 WDR62O43379 1518 aa16.72■□□□□ 0.27
SMPD4-205ENST00000431183 TRIM52Q96A61 297 aa16.7■□□□□ 0.26
SMPD4-205ENST00000431183 EIF4G3O43432 1585 aaKnown RBP16.69■□□□□ 0.26
SMPD4-205ENST00000431183 GRIN2AQ12879 1464 aa16.65■□□□□ 0.26
SMPD4-205ENST00000431183 ABCA5Q8WWZ7 1642 aa16.65■□□□□ 0.26
SMPD4-205ENST00000431183 PHLDB1Q86UU1 1377 aa16.65■□□□□ 0.26
SMPD4-205ENST00000431183 CDK11AQ9UQ88 783 aaPredicted RBP16.64■□□□□ 0.25
SMPD4-205ENST00000431183 ZNF644Q9H582 1327 aaPredicted RBP16.64■□□□□ 0.25
SMPD4-205ENST00000431183 FMN1Q68DA7 1419 aa16.64■□□□□ 0.25
SMPD4-205ENST00000431183 THOC2Q8NI27 1593 aaKnown RBP16.63■□□□□ 0.25
SMPD4-205ENST00000431183 CCNB3Q8WWL7 1395 aa16.63■□□□□ 0.25
SMPD4-205ENST00000431183 PLEKHD1A6NEE1 506 aa16.63■□□□□ 0.25
SMPD4-205ENST00000431183 PRG4Q92954 1404 aaPredicted RBP16.61■□□□□ 0.25
SMPD4-205ENST00000431183 ZEB1P37275 1124 aaPredicted RBP16.6■□□□□ 0.25
SMPD4-205ENST00000431183 CUL7Q14999 1698 aa16.6■□□□□ 0.25
SMPD4-205ENST00000431183 SYNJ2O15056 1496 aa16.59■□□□□ 0.25
SMPD4-205ENST00000431183 CDK13Q14004 1512 aaKnown RBP16.59■□□□□ 0.25
SMPD4-205ENST00000431183 PLB1Q6P1J6 1458 aa16.59■□□□□ 0.25
SMPD4-205ENST00000431183 CFDP1Q9UEE9 299 aaPredicted RBP16.58■□□□□ 0.25
SMPD4-205ENST00000431183 PCF11O94913 1555 aaKnown RBP16.58■□□□□ 0.24
SMPD4-205ENST00000431183 CARMIL2Q6F5E8 1435 aa16.57■□□□□ 0.24
SMPD4-205ENST00000431183 SCAF1Q9H7N4 1312 aaKnown RBP16.57■□□□□ 0.24
SMPD4-205ENST00000431183 CYB5RLQ6IPT4 315 aa16.57■□□□□ 0.24
SMPD4-205ENST00000431183 PTPRGP23470 1445 aa16.57■□□□□ 0.24
SMPD4-205ENST00000431183 PBRM1Q86U86 1689 aa16.56■□□□□ 0.24
SMPD4-205ENST00000431183 ADAMTS12P58397 1594 aa16.56■□□□□ 0.24
SMPD4-205ENST00000431183 IQGAP2Q13576 1575 aa16.56■□□□□ 0.24
SMPD4-205ENST00000431183 OSCARQ8IYS5 282 aa16.56■□□□□ 0.24
SMPD4-205ENST00000431183 SIN3AQ96ST3 1273 aa16.54■□□□□ 0.24
SMPD4-205ENST00000431183 KIAA0586Q9BVV6 1533 aa16.54■□□□□ 0.24
SMPD4-205ENST00000431183 LRRC9Q6ZRR7 1453 aa16.54■□□□□ 0.24
SMPD4-205ENST00000431183 FOXD1Q16676 465 aa16.53■□□□□ 0.24
SMPD4-205ENST00000431183 MAGI1Q96QZ7 1491 aaPredicted RBP16.52■□□□□ 0.24
SMPD4-205ENST00000431183 WDR97A6NE52 1622 aa16.52■□□□□ 0.23
SMPD4-205ENST00000431183 CASKIN1Q8WXD9 1431 aa16.51■□□□□ 0.23
SMPD4-205ENST00000431183 HIRIP3Q9BW71 556 aaPredicted RBP16.51■□□□□ 0.23
SMPD4-205ENST00000431183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.49■□□□□ 0.236e-7■■■□□ 16.9
SMPD4-205ENST00000431183 HNRNPMP52272 730 aaKnown RBP eCLIP16.49■□□□□ 0.231e-6■■■■□ 22.6
SMPD4-205ENST00000431183 NPM1P06748 294 aaKnown RBP eCLIP16.48■□□□□ 0.23
SMPD4-205ENST00000431183 TIAM1Q13009 1591 aa16.45■□□□□ 0.22
SMPD4-205ENST00000431183 CEP170Q5SW79 1584 aa16.45■□□□□ 0.22
SMPD4-205ENST00000431183 CNGB1Q14028 1251 aaPredicted RBP16.45■□□□□ 0.22
SMPD4-205ENST00000431183 ZNF326Q5BKZ1 582 aaKnown RBP16.45■□□□□ 0.22
SMPD4-205ENST00000431183 CTTNBP2Q8WZ74 1663 aa16.44■□□□□ 0.22
SMPD4-205ENST00000431183 RAB3GAP2Q9H2M9 1393 aa16.44■□□□□ 0.22
SMPD4-205ENST00000431183 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
SMPD4-205ENST00000431183 FYCO1Q9BQS8 1478 aa16.42■□□□□ 0.22
SMPD4-205ENST00000431183 EFCAB5A4FU69 1503 aa16.42■□□□□ 0.22
SMPD4-205ENST00000431183 NCOA2Q15596 1464 aa16.42■□□□□ 0.22
SMPD4-205ENST00000431183 DISP1Q96F81 1524 aa16.42■□□□□ 0.22
SMPD4-205ENST00000431183 EPRSP07814 1512 aaKnown RBP16.4■□□□□ 0.22
SMPD4-205ENST00000431183 TSPY4P0CV99 314 aa16.38■□□□□ 0.21
SMPD4-205ENST00000431183 TSPY10P0CW01 314 aa16.38■□□□□ 0.21
SMPD4-205ENST00000431183 ERCC6L2Q5T890 1561 aa16.36■□□□□ 0.21
SMPD4-205ENST00000431183 FGD6Q6ZV73 1430 aa16.36■□□□□ 0.21
SMPD4-205ENST00000431183 YTHDC1Q96MU7 727 aaKnown RBP16.34■□□□□ 0.21
SMPD4-205ENST00000431183 NUP160Q12769 1436 aa16.34■□□□□ 0.21
SMPD4-205ENST00000431183 MYT1Q01538 1121 aa16.34■□□□□ 0.21
SMPD4-205ENST00000431183 POLR3GLQ9BT43 218 aa16.34■□□□□ 0.21
SMPD4-205ENST00000431183 NUP153P49790 1475 aaKnown RBP16.33■□□□□ 0.21
SMPD4-205ENST00000431183 PLPPR3Q6T4P5 718 aa16.33■□□□□ 0.2
SMPD4-205ENST00000431183 SLC4A1APQ9BWU0 796 aaKnown RBP16.32■□□□□ 0.2
SMPD4-205ENST00000431183 SETD5Q9C0A6 1442 aa16.31■□□□□ 0.2
SMPD4-205ENST00000431183 KIAA0556O60303 1618 aa16.31■□□□□ 0.2
SMPD4-205ENST00000431183 CCDC18Q5T9S5 1454 aa16.31■□□□□ 0.2
SMPD4-205ENST00000431183 MYOM3Q5VTT5 1437 aa16.3■□□□□ 0.2
SMPD4-205ENST00000431183 MAGI3Q5TCQ9 1506 aa16.3■□□□□ 0.2
SMPD4-205ENST00000431183 RRBP1Q9P2E9 1410 aaKnown RBP16.3■□□□□ 0.2
SMPD4-205ENST00000431183 CHD1O14646 1710 aa16.29■□□□□ 0.2
SMPD4-205ENST00000431183 DHX57Q6P158 1386 aaKnown RBP16.28■□□□□ 0.2
SMPD4-205ENST00000431183 UGGT2Q9NYU1 1516 aa16.28■□□□□ 0.2
SMPD4-205ENST00000431183 PTPRKQ15262 1439 aa16.27■□□□□ 0.2
SMPD4-205ENST00000431183 ARHGEF11O15085 1522 aa16.27■□□□□ 0.2
SMPD4-205ENST00000431183 DIEXFQ68CQ4 756 aaKnown RBP16.27■□□□□ 0.19
SMPD4-205ENST00000431183 SAMD9Q5K651 1589 aa16.27■□□□□ 0.19
SMPD4-205ENST00000431183 AFAP1Q8N556 730 aa16.26■□□□□ 0.19
SMPD4-205ENST00000431183 ATP10BO94823 1461 aa16.25■□□□□ 0.19
SMPD4-205ENST00000431183 KDM2AQ9Y2K7 1162 aa16.25■□□□□ 0.19
SMPD4-205ENST00000431183 UACAQ9BZF9 1416 aa16.25■□□□□ 0.19
SMPD4-205ENST00000431183 HECW1Q76N89 1606 aa16.24■□□□□ 0.19
SMPD4-205ENST00000431183 RGL3Q3MIN7 710 aa16.23■□□□□ 0.19
SMPD4-205ENST00000431183 TROQ12816 1431 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms