RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 RAPGEF2Q9Y4G8 1499 aa29.16■■■□□ 2.26
CTDSP1-203ENST00000431127 KIAA0586Q9BVV6 1533 aa29.15■■■□□ 2.26
CTDSP1-203ENST00000431127 JPH4Q96JJ6 628 aa29.15■■■□□ 2.26
CTDSP1-203ENST00000431127 SHROOM2Q13796 1616 aa29.14■■■□□ 2.26
CTDSP1-203ENST00000431127 EEA1Q15075 1411 aa29.09■■■□□ 2.25
CTDSP1-203ENST00000431127 PRG4Q92954 1404 aaPredicted RBP29.07■■■□□ 2.24
CTDSP1-203ENST00000431127 CSRNP3Q8WYN3 585 aa29.06■■■□□ 2.24
CTDSP1-203ENST00000431127 PRXQ9BXM0 1461 aa29.04■■■□□ 2.24
CTDSP1-203ENST00000431127 ERCC6L2Q5T890 1561 aa29.02■■■□□ 2.24
CTDSP1-203ENST00000431127 IQGAP2Q13576 1575 aa28.95■■■□□ 2.22
CTDSP1-203ENST00000431127 FAM9AQ8IZU1 332 aaPredicted RBP28.9■■■□□ 2.22
CTDSP1-203ENST00000431127 CARMIL2Q6F5E8 1435 aa28.87■■■□□ 2.21
CTDSP1-203ENST00000431127 UGGT2Q9NYU1 1516 aa28.8■■■□□ 2.2
CTDSP1-203ENST00000431127 CTTNBP2Q8WZ74 1663 aa28.79■■■□□ 2.2
CTDSP1-203ENST00000431127 TNIKQ9UKE5 1360 aa28.76■■■□□ 2.2
CTDSP1-203ENST00000431127 PTPRGP23470 1445 aa28.75■■■□□ 2.19
CTDSP1-203ENST00000431127 DISP1Q96F81 1524 aa28.74■■■□□ 2.19
CTDSP1-203ENST00000431127 KIF21BO75037 1637 aa28.71■■■□□ 2.19
CTDSP1-203ENST00000431127 GOLGA3Q08378 1498 aa28.69■■■□□ 2.18
CTDSP1-203ENST00000431127 TTBK1Q5TCY1 1321 aaPredicted RBP28.65■■■□□ 2.18
CTDSP1-203ENST00000431127 KIAA0556O60303 1618 aa28.65■■■□□ 2.18
CTDSP1-203ENST00000431127 NPM1P06748 294 aaKnown RBP eCLIP28.62■■■□□ 2.17
CTDSP1-203ENST00000431127 ADCY10Q96PN6 1610 aa28.57■■■□□ 2.16
CTDSP1-203ENST00000431127 UBTFP17480 764 aaKnown RBP28.55■■■□□ 2.16
CTDSP1-203ENST00000431127 UACAQ9BZF9 1416 aa28.54■■■□□ 2.16
CTDSP1-203ENST00000431127 UHRF1BP1LA0JNW5 1464 aa28.52■■■□□ 2.16
CTDSP1-203ENST00000431127 EHMT2Q96KQ7 1210 aa28.5■■■□□ 2.15
CTDSP1-203ENST00000431127 P3H3Q8IVL6 736 aa28.46■■■□□ 2.15
CTDSP1-203ENST00000431127 ABCC2Q92887 1545 aa28.46■■■□□ 2.15
CTDSP1-203ENST00000431127 RANGAP1P46060 587 aaPredicted RBP28.45■■■□□ 2.14
CTDSP1-203ENST00000431127 FAM69CQ0P6D2 419 aa28.45■■■□□ 2.14
CTDSP1-203ENST00000431127 SAMD9Q5K651 1589 aa28.45■■■□□ 2.14
CTDSP1-203ENST00000431127 MAPKBP1O60336 1514 aa28.44■■■□□ 2.14
CTDSP1-203ENST00000431127 AEBP2Q6ZN18 517 aaPredicted RBP28.41■■■□□ 2.14
CTDSP1-203ENST00000431127 KIF13AQ9H1H9 1805 aa28.4■■■□□ 2.14
CTDSP1-203ENST00000431127 ABCC10Q5T3U5 1492 aa28.39■■■□□ 2.13
CTDSP1-203ENST00000431127 PLB1Q6P1J6 1458 aa28.39■■■□□ 2.13
CTDSP1-203ENST00000431127 EFCAB5A4FU69 1503 aa28.38■■■□□ 2.13
CTDSP1-203ENST00000431127 KDM5BQ9UGL1 1544 aa28.36■■■□□ 2.13
CTDSP1-203ENST00000431127 ABCA8O94911 1581 aa28.35■■■□□ 2.13
CTDSP1-203ENST00000431127 FHOD3Q2V2M9 1422 aa28.3■■■□□ 2.12
CTDSP1-203ENST00000431127 ASXL2Q76L83 1435 aa28.28■■■□□ 2.12
CTDSP1-203ENST00000431127 ZCCHC11Q5TAX3 1644 aaKnown RBP28.25■■■□□ 2.11
CTDSP1-203ENST00000431127 DIP2BQ9P265 1576 aa28.23■■■□□ 2.11
CTDSP1-203ENST00000431127 ARHGAP35Q9NRY4 1499 aa28.21■■■□□ 2.11
CTDSP1-203ENST00000431127 RAPGEF6Q8TEU7 1601 aa28.19■■■□□ 2.1
CTDSP1-203ENST00000431127 FMN1Q68DA7 1419 aa28.15■■■□□ 2.1
CTDSP1-203ENST00000431127 ATP10BO94823 1461 aa28.15■■■□□ 2.1
CTDSP1-203ENST00000431127 WDR7Q9Y4E6 1490 aa28.15■■■□□ 2.1
CTDSP1-203ENST00000431127 ARID3CA6NKF2 412 aa28.12■■■□□ 2.09
CTDSP1-203ENST00000431127 GLI2P10070 1586 aa28.11■■■□□ 2.09
CTDSP1-203ENST00000431127 NUP153P49790 1475 aaKnown RBP28.1■■■□□ 2.09
CTDSP1-203ENST00000431127 EPRSP07814 1512 aaKnown RBP28.1■■■□□ 2.09
CTDSP1-203ENST00000431127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.08■■■□□ 2.09
CTDSP1-203ENST00000431127 HNRNPUL2Q1KMD3 747 aaKnown RBP28.08■■■□□ 2.09
CTDSP1-203ENST00000431127 CLIP1P30622 1438 aa28.07■■■□□ 2.08
CTDSP1-203ENST00000431127 KCNH8Q96L42 1107 aa28.03■■■□□ 2.08
CTDSP1-203ENST00000431127 TSPOAP1O95153 1857 aa28.03■■■□□ 2.08
CTDSP1-203ENST00000431127 ATP1B4Q9UN42 357 aaPredicted RBP27.99■■■□□ 2.07
CTDSP1-203ENST00000431127 KDM6BO15054 1643 aa27.98■■■□□ 2.07
CTDSP1-203ENST00000431127 PLEKHD1A6NEE1 506 aa27.97■■■□□ 2.07
CTDSP1-203ENST00000431127 LOC105371045A0A1W2PR82 267 aa27.96■■■□□ 2.07
CTDSP1-203ENST00000431127 HECW1Q76N89 1606 aa27.96■■■□□ 2.07
CTDSP1-203ENST00000431127 MAP3K4Q9Y6R4 1608 aa27.94■■■□□ 2.06
CTDSP1-203ENST00000431127 CEP162Q5TB80 1403 aa27.92■■■□□ 2.06
CTDSP1-203ENST00000431127 CD109Q6YHK3 1445 aa27.9■■■□□ 2.06
CTDSP1-203ENST00000431127 CASKIN1Q8WXD9 1431 aa27.9■■■□□ 2.06
CTDSP1-203ENST00000431127 TEX14Q8IWB6 1497 aa27.89■■■□□ 2.06
CTDSP1-203ENST00000431127 CDK11AQ9UQ88 783 aaPredicted RBP27.89■■■□□ 2.06
CTDSP1-203ENST00000431127 CDK13Q14004 1512 aaKnown RBP27.88■■■□□ 2.05
CTDSP1-203ENST00000431127 KDM4FA0A1W2PPD8 638 aa27.87■■■□□ 2.05
CTDSP1-203ENST00000431127 CFAP43Q8NDM7 1665 aa27.87■■■□□ 2.05
CTDSP1-203ENST00000431127 PPRC1Q5VV67 1664 aaKnown RBP27.84■■■□□ 2.05
CTDSP1-203ENST00000431127 MAGI3Q5TCQ9 1506 aa27.84■■■□□ 2.05
CTDSP1-203ENST00000431127 FYCO1Q9BQS8 1478 aa27.83■■■□□ 2.04
CTDSP1-203ENST00000431127 PCF11O94913 1555 aaKnown RBP27.82■■■□□ 2.04
CTDSP1-203ENST00000431127 ABCA9Q8IUA7 1624 aa27.81■■■□□ 2.04
CTDSP1-203ENST00000431127 CCDC18Q5T9S5 1454 aa27.8■■■□□ 2.04
CTDSP1-203ENST00000431127 COL17A1Q9UMD9 1497 aaPredicted RBP27.77■■■□□ 2.04
CTDSP1-203ENST00000431127 TROQ12816 1431 aaPredicted RBP27.72■■■□□ 2.03
CTDSP1-203ENST00000431127 LRRIQ1Q96JM4 1722 aa27.7■■■□□ 2.03
CTDSP1-203ENST00000431127 PHLDB1Q86UU1 1377 aa27.7■■■□□ 2.02
CTDSP1-203ENST00000431127 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.69■■■□□ 2.02
CTDSP1-203ENST00000431127 NEO1Q92859 1461 aa27.64■■■□□ 2.01
CTDSP1-203ENST00000431127 KIF14Q15058 1648 aa27.63■■■□□ 2.01
CTDSP1-203ENST00000431127 TTC37Q6PGP7 1564 aa27.62■■■□□ 2.01
CTDSP1-203ENST00000431127 VPS8Q8N3P4 1428 aa27.6■■■□□ 2.01
CTDSP1-203ENST00000431127 ARAP3Q8WWN8 1544 aa27.6■■■□□ 2.01
CTDSP1-203ENST00000431127 PLCH2O75038 1416 aa27.58■■■□□ 2.01
CTDSP1-203ENST00000431127 FANCAO15360 1455 aa27.57■■■□□ 2
CTDSP1-203ENST00000431127 CFAP74Q9C0B2 1584 aa27.53■■■□□ 2
CTDSP1-203ENST00000431127 MTUS2Q5JR59 1369 aa27.53■■■□□ 2
CTDSP1-203ENST00000431127 ADGRL1O94910 1474 aa27.52■■■□□ 2
CTDSP1-203ENST00000431127 AKNAQ7Z591 1439 aa27.52■■■□□ 2
CTDSP1-203ENST00000431127 EFCAB2Q5VUJ9 269 aa27.52■■■□□ 2
CTDSP1-203ENST00000431127 MYO5CQ9NQX4 1742 aa27.49■■□□□ 1.99
CTDSP1-203ENST00000431127 RAPGEF3O95398 923 aa27.45■■□□□ 1.98
CTDSP1-203ENST00000431127 DENND4BO75064 1496 aaPredicted RBP27.44■■□□□ 1.98
CTDSP1-203ENST00000431127 ARHGAP5Q13017 1502 aa27.43■■□□□ 1.98
CTDSP1-203ENST00000431127 EHBP1L1Q8N3D4 1523 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms