RNA–Protein interactions for RNA: ENST00000428823.6

PCBP4-203, Transcript of poly(rC) binding protein 4, humanhuman

TSL 5 BASIC

Gene PCBP4, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-203ENST00000428823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.58■■□□□ 1.84
PCBP4-203ENST00000428823 TIAM1Q13009 1591 aa26.56■■□□□ 1.84
PCBP4-203ENST00000428823 CCER1Q8TC90 406 aaPredicted RBP26.55■■□□□ 1.84
PCBP4-203ENST00000428823 IFT140Q96RY7 1462 aa26.55■■□□□ 1.84
PCBP4-203ENST00000428823 KANK4Q5T7N3 995 aaPredicted RBP26.53■■□□□ 1.84
PCBP4-203ENST00000428823 CFAP43Q8NDM7 1665 aa26.5■■□□□ 1.83
PCBP4-203ENST00000428823 AQRO60306 1485 aaKnown RBP eCLIP26.5■■□□□ 1.831e-8■■■□□ 18.9
PCBP4-203ENST00000428823 PCF11O94913 1555 aaKnown RBP26.5■■□□□ 1.83
PCBP4-203ENST00000428823 SAMD9Q5K651 1589 aa26.5■■□□□ 1.83
PCBP4-203ENST00000428823 ADAMTS12P58397 1594 aa26.49■■□□□ 1.83
PCBP4-203ENST00000428823 RRBP1Q9P2E9 1410 aaKnown RBP26.48■■□□□ 1.83
PCBP4-203ENST00000428823 GRIN2BQ13224 1484 aa26.48■■□□□ 1.83
PCBP4-203ENST00000428823 FYCO1Q9BQS8 1478 aa26.46■■□□□ 1.83
PCBP4-203ENST00000428823 THOC2Q8NI27 1593 aaKnown RBP26.46■■□□□ 1.83
PCBP4-203ENST00000428823 ERCC6Q03468 1493 aa26.44■■□□□ 1.82
PCBP4-203ENST00000428823 FHOD3Q2V2M9 1422 aa26.44■■□□□ 1.82
PCBP4-203ENST00000428823 CASKIN1Q8WXD9 1431 aa26.42■■□□□ 1.82
PCBP4-203ENST00000428823 FMN1Q68DA7 1419 aa26.42■■□□□ 1.82
PCBP4-203ENST00000428823 LRRC9Q6ZRR7 1453 aa26.41■■□□□ 1.82
PCBP4-203ENST00000428823 HNRNPUL2Q1KMD3 747 aaKnown RBP26.39■■□□□ 1.82
PCBP4-203ENST00000428823 ZNF608Q9ULD9 1512 aaPredicted RBP26.35■■□□□ 1.81
PCBP4-203ENST00000428823 P3H3Q8IVL6 736 aa26.35■■□□□ 1.81
PCBP4-203ENST00000428823 EIF4G3O43432 1585 aaKnown RBP26.33■■□□□ 1.81
PCBP4-203ENST00000428823 SNAPC4Q5SXM2 1469 aa26.33■■□□□ 1.81
PCBP4-203ENST00000428823 IQGAP2Q13576 1575 aa26.33■■□□□ 1.81
PCBP4-203ENST00000428823 CCNB3Q8WWL7 1395 aa26.31■■□□□ 1.8
PCBP4-203ENST00000428823 MAGI1Q96QZ7 1491 aaPredicted RBP26.21■■□□□ 1.79
PCBP4-203ENST00000428823 UGGT2Q9NYU1 1516 aa26.21■■□□□ 1.79
PCBP4-203ENST00000428823 LRRIQ1Q96JM4 1722 aa26.21■■□□□ 1.79
PCBP4-203ENST00000428823 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
PCBP4-203ENST00000428823 PHLDB1Q86UU1 1377 aa26.17■■□□□ 1.78
PCBP4-203ENST00000428823 KIAA0586Q9BVV6 1533 aa26.16■■□□□ 1.78
PCBP4-203ENST00000428823 ATP1B4Q9UN42 357 aaPredicted RBP26.15■■□□□ 1.78
PCBP4-203ENST00000428823 CLSPNQ9HAW4 1339 aa26.11■■□□□ 1.77
PCBP4-203ENST00000428823 HECW1Q76N89 1606 aa26.11■■□□□ 1.77
PCBP4-203ENST00000428823 CCDC18Q5T9S5 1454 aa26.1■■□□□ 1.77
PCBP4-203ENST00000428823 SYNJ2O15056 1496 aa26.09■■□□□ 1.77
PCBP4-203ENST00000428823 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.09■■□□□ 1.77
PCBP4-203ENST00000428823 EHBP1L1Q8N3D4 1523 aa26.06■■□□□ 1.76
PCBP4-203ENST00000428823 MTUS2Q5JR59 1369 aa26.05■■□□□ 1.76
PCBP4-203ENST00000428823 KIAA0556O60303 1618 aa26.05■■□□□ 1.76
PCBP4-203ENST00000428823 SUPT6HQ7KZ85 1726 aaKnown RBP26.04■■□□□ 1.76
PCBP4-203ENST00000428823 DHX57Q6P158 1386 aaKnown RBP26.03■■□□□ 1.76
PCBP4-203ENST00000428823 DISP1Q96F81 1524 aa26.01■■□□□ 1.75
PCBP4-203ENST00000428823 CEP170Q5SW79 1584 aa25.99■■□□□ 1.75
PCBP4-203ENST00000428823 FGD6Q6ZV73 1430 aa25.97■■□□□ 1.75
PCBP4-203ENST00000428823 EPRSP07814 1512 aaKnown RBP25.96■■□□□ 1.75
PCBP4-203ENST00000428823 NUP160Q12769 1436 aa25.95■■□□□ 1.75
PCBP4-203ENST00000428823 ARHGEF11O15085 1522 aa25.95■■□□□ 1.74
PCBP4-203ENST00000428823 NCOA2Q15596 1464 aa25.95■■□□□ 1.74
PCBP4-203ENST00000428823 CHMP7Q8WUX9 453 aaPredicted RBP25.95■■□□□ 1.74
PCBP4-203ENST00000428823 MAGI3Q5TCQ9 1506 aa25.92■■□□□ 1.74
PCBP4-203ENST00000428823 FAM50AQ14320 339 aaKnown RBP25.91■■□□□ 1.74
PCBP4-203ENST00000428823 MYOM3Q5VTT5 1437 aa25.91■■□□□ 1.74
PCBP4-203ENST00000428823 SETD5Q9C0A6 1442 aa25.91■■□□□ 1.74
PCBP4-203ENST00000428823 ITGAEP38570 1179 aa25.91■■□□□ 1.74
PCBP4-203ENST00000428823 RAB3GAP2Q9H2M9 1393 aa25.9■■□□□ 1.74
PCBP4-203ENST00000428823 RAPGEF6Q8TEU7 1601 aa25.87■■□□□ 1.73
PCBP4-203ENST00000428823 CDK13Q14004 1512 aaKnown RBP25.83■■□□□ 1.73
PCBP4-203ENST00000428823 PTPN23Q9H3S7 1636 aa25.81■■□□□ 1.72
PCBP4-203ENST00000428823 CARMIL2Q6F5E8 1435 aa25.8■■□□□ 1.72
PCBP4-203ENST00000428823 NUP153P49790 1475 aaKnown RBP25.8■■□□□ 1.72
PCBP4-203ENST00000428823 TCOF1Q13428 1488 aaKnown RBP25.77■■□□□ 1.72
PCBP4-203ENST00000428823 FBLN2P98095 1184 aa25.77■■□□□ 1.72
PCBP4-203ENST00000428823 ZNF316A6NFI3 1004 aaPredicted RBP25.74■■□□□ 1.71
PCBP4-203ENST00000428823 MIA2Q96PC5 1412 aa25.74■■□□□ 1.71
PCBP4-203ENST00000428823 JPH4Q96JJ6 628 aa25.74■■□□□ 1.71
PCBP4-203ENST00000428823 MAPKBP1O60336 1514 aa25.73■■□□□ 1.71
PCBP4-203ENST00000428823 HFM1A2PYH4 1435 aa25.7■■□□□ 1.71
PCBP4-203ENST00000428823 CHD1O14646 1710 aa25.68■■□□□ 1.7
PCBP4-203ENST00000428823 PTPRKQ15262 1439 aa25.67■■□□□ 1.7
PCBP4-203ENST00000428823 CDK11AQ9UQ88 783 aaPredicted RBP25.66■■□□□ 1.7
PCBP4-203ENST00000428823 PLB1Q6P1J6 1458 aa25.64■■□□□ 1.7
PCBP4-203ENST00000428823 DIEXFQ68CQ4 756 aaKnown RBP25.64■■□□□ 1.7
PCBP4-203ENST00000428823 ABCA8O94911 1581 aa25.63■■□□□ 1.69
PCBP4-203ENST00000428823 ADCY10Q96PN6 1610 aa25.62■■□□□ 1.69
PCBP4-203ENST00000428823 GCC2Q8IWJ2 1684 aa25.61■■□□□ 1.69
PCBP4-203ENST00000428823 TROQ12816 1431 aaPredicted RBP25.6■■□□□ 1.69
PCBP4-203ENST00000428823 AKNAQ7Z591 1439 aa25.6■■□□□ 1.69
PCBP4-203ENST00000428823 NAIPQ13075 1403 aa25.6■■□□□ 1.69
PCBP4-203ENST00000428823 ITSN2Q9NZM3 1697 aa25.57■■□□□ 1.68
PCBP4-203ENST00000428823 SHROOM2Q13796 1616 aa25.57■■□□□ 1.68
PCBP4-203ENST00000428823 ARID3CA6NKF2 412 aa25.56■■□□□ 1.68
PCBP4-203ENST00000428823 UACAQ9BZF9 1416 aa25.54■■□□□ 1.68
PCBP4-203ENST00000428823 PRG4Q92954 1404 aaPredicted RBP25.53■■□□□ 1.68
PCBP4-203ENST00000428823 DNMT1P26358 1616 aaKnown RBP25.51■■□□□ 1.67
PCBP4-203ENST00000428823 TIMELESSQ9UNS1 1208 aa25.49■■□□□ 1.67
PCBP4-203ENST00000428823 KIF14Q15058 1648 aa25.47■■□□□ 1.67
PCBP4-203ENST00000428823 ATP10BO94823 1461 aa25.45■■□□□ 1.66
PCBP4-203ENST00000428823 PTPRGP23470 1445 aa25.44■■□□□ 1.66
PCBP4-203ENST00000428823 DAPK1P53355 1430 aa25.44■■□□□ 1.66
PCBP4-203ENST00000428823 ROCK1Q13464 1354 aa25.43■■□□□ 1.66
PCBP4-203ENST00000428823 GPATCH8Q9UKJ3 1502 aaKnown RBP25.43■■□□□ 1.66
PCBP4-203ENST00000428823 ACIN1Q9UKV3 1341 aaKnown RBP25.42■■□□□ 1.66
PCBP4-203ENST00000428823 ABCC5O15440 1437 aa25.39■■□□□ 1.66
PCBP4-203ENST00000428823 CDC42BPAQ5VT25 1732 aa25.38■■□□□ 1.65
PCBP4-203ENST00000428823 CAMSAP2Q08AD1 1489 aa25.38■■□□□ 1.65
PCBP4-203ENST00000428823 PLEKHD1A6NEE1 506 aa25.37■■□□□ 1.65
PCBP4-203ENST00000428823 CLASP1Q7Z460 1538 aa25.36■■□□□ 1.65
PCBP4-203ENST00000428823 ABCC10Q5T3U5 1492 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms