RNA–Protein interactions for RNA: ENST00000428823.6

PCBP4-203, Transcript of poly(rC) binding protein 4, humanhuman

TSL 5 BASIC

Gene PCBP4, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-203ENST00000428823 NISCHQ9Y2I1 1504 aa38.44■■■■□ 3.74
PCBP4-203ENST00000428823 CCDC180Q9P1Z9 1646 aa33.33■■■□□ 2.93
PCBP4-203ENST00000428823 ZCCHC6Q5VYS8 1495 aaKnown RBP32.42■■■□□ 2.78
PCBP4-203ENST00000428823 DCAF1Q9Y4B6 1507 aa31.83■■■□□ 2.69
PCBP4-203ENST00000428823 SHROOM4Q9ULL8 1493 aa31.64■■■□□ 2.66
PCBP4-203ENST00000428823 DCAF8L2P0C7V8 631 aa31.45■■■□□ 2.62
PCBP4-203ENST00000428823 MYO15BQ96JP2 1530 aa31.25■■■□□ 2.59
PCBP4-203ENST00000428823 ABCC9O60706 1549 aa30.9■■■□□ 2.54
PCBP4-203ENST00000428823 NACADO15069 1562 aa30.87■■■□□ 2.53
PCBP4-203ENST00000428823 SUPT5HO00267 1087 aaKnown RBP30.73■■■□□ 2.51
PCBP4-203ENST00000428823 SCRIBQ14160 1630 aa30.65■■■□□ 2.5
PCBP4-203ENST00000428823 RB1CC1Q8TDY2 1594 aa30.47■■■□□ 2.47
PCBP4-203ENST00000428823 RSF1Q96T23 1441 aaPredicted RBP30.01■■■□□ 2.39
PCBP4-203ENST00000428823 UNC13AQ9UPW8 1703 aa29.95■■■□□ 2.39
PCBP4-203ENST00000428823 CECR2Q9BXF3 1484 aa29.79■■■□□ 2.36
PCBP4-203ENST00000428823 CHIC1Q5VXU3 224 aa29.75■■■□□ 2.35
PCBP4-203ENST00000428823 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.35
PCBP4-203ENST00000428823 BAZ1AQ9NRL2 1556 aaPredicted RBP29.65■■■□□ 2.34
PCBP4-203ENST00000428823 BICRAQ9NZM4 1560 aa29.54■■■□□ 2.32
PCBP4-203ENST00000428823 WIZO95785 1651 aa29.51■■■□□ 2.32
PCBP4-203ENST00000428823 SMARCA4P51532 1647 aa29.45■■■□□ 2.31
PCBP4-203ENST00000428823 TOP2AP11388 1531 aaKnown RBP29.22■■■□□ 2.27
PCBP4-203ENST00000428823 PABPN1Q86U42 306 aaKnown RBP eCLIP29.21■■■□□ 2.27
PCBP4-203ENST00000428823 PEG3Q9GZU2 1588 aa29.1■■■□□ 2.25
PCBP4-203ENST00000428823 EIF4G1Q04637 1599 aaKnown RBP28.99■■■□□ 2.23
PCBP4-203ENST00000428823 SMARCA2P51531 1590 aa28.97■■■□□ 2.23
PCBP4-203ENST00000428823 CCDC88BA6NC98 1476 aa28.91■■■□□ 2.22
PCBP4-203ENST00000428823 TRIM41Q8WV44 630 aa28.87■■■□□ 2.21
PCBP4-203ENST00000428823 ATAD2BQ9ULI0 1458 aa28.79■■■□□ 2.2
PCBP4-203ENST00000428823 BAZ1BQ9UIG0 1483 aaKnown RBP28.67■■■□□ 2.18
PCBP4-203ENST00000428823 LOC105371045A0A1W2PR82 267 aa28.59■■■□□ 2.17
PCBP4-203ENST00000428823 HMGXB3Q12766 1538 aa28.5■■■□□ 2.15
PCBP4-203ENST00000428823 ABCC8Q09428 1581 aa28.48■■■□□ 2.15
PCBP4-203ENST00000428823 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
PCBP4-203ENST00000428823 FAM9AQ8IZU1 332 aaPredicted RBP28.32■■■□□ 2.12
PCBP4-203ENST00000428823 WRNQ14191 1432 aaPredicted RBP eCLIP28.24■■■□□ 2.11
PCBP4-203ENST00000428823 EEA1Q15075 1411 aa28.16■■■□□ 2.1
PCBP4-203ENST00000428823 SYNJ1O43426 1573 aa28.11■■■□□ 2.09
PCBP4-203ENST00000428823 SOGA1O94964 1423 aa28.04■■■□□ 2.08
PCBP4-203ENST00000428823 CC2D2AQ9P2K1 1620 aa28.03■■■□□ 2.08
PCBP4-203ENST00000428823 CFTRP13569 1480 aa27.99■■■□□ 2.07
PCBP4-203ENST00000428823 PRDM2Q13029 1718 aa27.99■■■□□ 2.07
PCBP4-203ENST00000428823 TOP2BQ02880 1626 aa27.98■■■□□ 2.07
PCBP4-203ENST00000428823 BIVM-ERCC5R4GMW8 1640 aa27.97■■■□□ 2.07
PCBP4-203ENST00000428823 RUSC2Q8N2Y8 1516 aa27.9■■■□□ 2.06
PCBP4-203ENST00000428823 CSRNP3Q8WYN3 585 aa27.89■■■□□ 2.06
PCBP4-203ENST00000428823 PCGF6Q9BYE7 350 aa27.88■■■□□ 2.05
PCBP4-203ENST00000428823 EHMT2Q96KQ7 1210 aa27.85■■■□□ 2.05
PCBP4-203ENST00000428823 TNIKQ9UKE5 1360 aa27.79■■■□□ 2.04
PCBP4-203ENST00000428823 TRIM26Q12899 539 aaPredicted RBP27.78■■■□□ 2.04
PCBP4-203ENST00000428823 KIF21BO75037 1637 aa27.78■■■□□ 2.04
PCBP4-203ENST00000428823 GOLGA3Q08378 1498 aa27.77■■■□□ 2.04
PCBP4-203ENST00000428823 CADPSQ9ULU8 1353 aa27.75■■■□□ 2.03
PCBP4-203ENST00000428823 CUX1P39880 1505 aa27.74■■■□□ 2.03
PCBP4-203ENST00000428823 CEP164Q9UPV0 1460 aa27.72■■■□□ 2.03
PCBP4-203ENST00000428823 CEP162Q5TB80 1403 aa27.67■■■□□ 2.02
PCBP4-203ENST00000428823 HRCP23327 699 aa27.57■■■□□ 2
PCBP4-203ENST00000428823 UBTFP17480 764 aaKnown RBP27.55■■■□□ 2
PCBP4-203ENST00000428823 ERICH3Q5RHP9 1530 aa27.49■■□□□ 1.99
PCBP4-203ENST00000428823 KIF27Q86VH2 1401 aa27.48■■□□□ 1.99
PCBP4-203ENST00000428823 RAPGEF2Q9Y4G8 1499 aa27.47■■□□□ 1.99
PCBP4-203ENST00000428823 FANCD2Q9BXW9 1451 aa27.46■■□□□ 1.99
PCBP4-203ENST00000428823 PRXQ9BXM0 1461 aa27.44■■□□□ 1.98
PCBP4-203ENST00000428823 LAMC3Q9Y6N6 1575 aa27.44■■□□□ 1.98
PCBP4-203ENST00000428823 DNMBPQ6XZF7 1577 aa27.34■■□□□ 1.97
PCBP4-203ENST00000428823 FGD5Q6ZNL6 1462 aa27.34■■□□□ 1.97
PCBP4-203ENST00000428823 CLIP1P30622 1438 aa27.32■■□□□ 1.96
PCBP4-203ENST00000428823 NESP48681 1621 aa27.31■■□□□ 1.96
PCBP4-203ENST00000428823 CUX2O14529 1486 aa27.25■■□□□ 1.95
PCBP4-203ENST00000428823 TOPBP1Q92547 1522 aa27.23■■□□□ 1.95
PCBP4-203ENST00000428823 VPS8Q8N3P4 1428 aa27.19■■□□□ 1.94
PCBP4-203ENST00000428823 PDS5BQ9NTI5 1447 aa27.16■■□□□ 1.94
PCBP4-203ENST00000428823 PPARGC1BQ86YN6 1023 aaKnown RBP27.16■■□□□ 1.94
PCBP4-203ENST00000428823 IGF1RP08069 1367 aa27.15■■□□□ 1.94
PCBP4-203ENST00000428823 ABCA10Q8WWZ4 1543 aa27.14■■□□□ 1.94
PCBP4-203ENST00000428823 POLA1P09884 1462 aaPredicted RBP27.14■■□□□ 1.94
PCBP4-203ENST00000428823 URB2Q14146 1524 aaKnown RBP27.08■■□□□ 1.93
PCBP4-203ENST00000428823 KIF21AQ7Z4S6 1674 aa27.07■■□□□ 1.92
PCBP4-203ENST00000428823 DNAJC5BQ9UF47 199 aa27.06■■□□□ 1.92
PCBP4-203ENST00000428823 WDR97A6NE52 1622 aa27.05■■□□□ 1.92
PCBP4-203ENST00000428823 CARMIL1Q5VZK9 1371 aa27.03■■□□□ 1.92
PCBP4-203ENST00000428823 RAD54L2Q9Y4B4 1467 aa27.02■■□□□ 1.92
PCBP4-203ENST00000428823 ARAP1Q96P48 1450 aa27■■□□□ 1.91
PCBP4-203ENST00000428823 ZEB1P37275 1124 aaPredicted RBP26.99■■□□□ 1.91
PCBP4-203ENST00000428823 CUL7Q14999 1698 aa26.97■■□□□ 1.91
PCBP4-203ENST00000428823 ABCA5Q8WWZ7 1642 aa26.9■■□□□ 1.9
PCBP4-203ENST00000428823 ARHGAP35Q9NRY4 1499 aa26.9■■□□□ 1.9
PCBP4-203ENST00000428823 APLP2Q06481 763 aa26.88■■□□□ 1.89
PCBP4-203ENST00000428823 RANGAP1P46060 587 aaPredicted RBP26.88■■□□□ 1.89
PCBP4-203ENST00000428823 TTBK1Q5TCY1 1321 aaPredicted RBP26.82■■□□□ 1.88
PCBP4-203ENST00000428823 TARBP1Q13395 1621 aaKnown RBP26.82■■□□□ 1.88
PCBP4-203ENST00000428823 MRC2Q9UBG0 1479 aa26.79■■□□□ 1.88
PCBP4-203ENST00000428823 CTTNBP2Q8WZ74 1663 aa26.78■■□□□ 1.88
PCBP4-203ENST00000428823 GAPVD1Q14C86 1478 aa26.76■■□□□ 1.88
PCBP4-203ENST00000428823 TDRD9Q8NDG6 1382 aaKnown RBP26.7■■□□□ 1.86
PCBP4-203ENST00000428823 EFCAB5A4FU69 1503 aa26.69■■□□□ 1.86
PCBP4-203ENST00000428823 MAP3K1Q13233 1512 aa26.66■■□□□ 1.86
PCBP4-203ENST00000428823 WDR62O43379 1518 aa26.65■■□□□ 1.86
PCBP4-203ENST00000428823 PBRM1Q86U86 1689 aa26.64■■□□□ 1.86
PCBP4-203ENST00000428823 FHAD1B1AJZ9 1412 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms