RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 JPH4Q96JJ6 628 aa14.76□□□□□ -0.05
CSTF1-203ENST00000428552 MAPKBP1O60336 1514 aa14.76□□□□□ -0.05
CSTF1-203ENST00000428552 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
CSTF1-203ENST00000428552 FAM69CQ0P6D2 419 aa14.74□□□□□ -0.05
CSTF1-203ENST00000428552 ADCY10Q96PN6 1610 aa14.74□□□□□ -0.05
CSTF1-203ENST00000428552 KDM4FA0A1W2PPD8 638 aa14.73□□□□□ -0.05
CSTF1-203ENST00000428552 KDM6BO15054 1643 aa14.67□□□□□ -0.06
CSTF1-203ENST00000428552 SUPT5HO00267 1087 aaKnown RBP14.62□□□□□ -0.07
CSTF1-203ENST00000428552 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
CSTF1-203ENST00000428552 TSPOAP1O95153 1857 aa14.61□□□□□ -0.07
CSTF1-203ENST00000428552 KIAA0586Q9BVV6 1533 aa14.61□□□□□ -0.07
CSTF1-203ENST00000428552 ILDR1Q86SU0 546 aaPredicted RBP14.6□□□□□ -0.07
CSTF1-203ENST00000428552 PPRC1Q5VV67 1664 aaKnown RBP14.58□□□□□ -0.08
CSTF1-203ENST00000428552 IGF1RP08069 1367 aa14.56□□□□□ -0.08
CSTF1-203ENST00000428552 CUL7Q14999 1698 aa14.52□□□□□ -0.09
CSTF1-203ENST00000428552 GLI2P10070 1586 aa14.51□□□□□ -0.09
CSTF1-203ENST00000428552 ABCC2Q92887 1545 aa14.51□□□□□ -0.09
CSTF1-203ENST00000428552 COL17A1Q9UMD9 1497 aaPredicted RBP14.51□□□□□ -0.09
CSTF1-203ENST00000428552 PTPRGP23470 1445 aa14.51□□□□□ -0.09
CSTF1-203ENST00000428552 ADGRL1O94910 1474 aa14.5□□□□□ -0.09
CSTF1-203ENST00000428552 ASXL2Q76L83 1435 aa14.49□□□□□ -0.09
CSTF1-203ENST00000428552 TNIKQ9UKE5 1360 aa14.47□□□□□ -0.09
CSTF1-203ENST00000428552 UHRF1BP1LA0JNW5 1464 aa14.46□□□□□ -0.09
CSTF1-203ENST00000428552 PLB1Q6P1J6 1458 aa14.46□□□□□ -0.09
CSTF1-203ENST00000428552 KIF27Q86VH2 1401 aa14.46□□□□□ -0.09
CSTF1-203ENST00000428552 MAP3K4Q9Y6R4 1608 aa14.44□□□□□ -0.1
CSTF1-203ENST00000428552 HECW2Q9P2P5 1572 aa14.43□□□□□ -0.1
CSTF1-203ENST00000428552 TTBK1Q5TCY1 1321 aaPredicted RBP14.42□□□□□ -0.1
CSTF1-203ENST00000428552 EPRSP07814 1512 aaKnown RBP14.42□□□□□ -0.1
CSTF1-203ENST00000428552 DISP1Q96F81 1524 aa14.42□□□□□ -0.1
CSTF1-203ENST00000428552 CARMIL1Q5VZK9 1371 aa14.42□□□□□ -0.1
CSTF1-203ENST00000428552 CARMIL2Q6F5E8 1435 aa14.41□□□□□ -0.1
CSTF1-203ENST00000428552 IQGAP2Q13576 1575 aa14.41□□□□□ -0.1
CSTF1-203ENST00000428552 KDM5BQ9UGL1 1544 aa14.41□□□□□ -0.1
CSTF1-203ENST00000428552 UACAQ9BZF9 1416 aa14.41□□□□□ -0.1
CSTF1-203ENST00000428552 ZCCHC11Q5TAX3 1644 aaKnown RBP14.37□□□□□ -0.11
CSTF1-203ENST00000428552 TEX14Q8IWB6 1497 aa14.34□□□□□ -0.11
CSTF1-203ENST00000428552 UGGT2Q9NYU1 1516 aa14.34□□□□□ -0.11
CSTF1-203ENST00000428552 KIAA0556O60303 1618 aa14.31□□□□□ -0.12
CSTF1-203ENST00000428552 WDR7Q9Y4E6 1490 aa14.29□□□□□ -0.12
CSTF1-203ENST00000428552 MAGI3Q5TCQ9 1506 aa14.26□□□□□ -0.13
CSTF1-203ENST00000428552 RAPGEF2Q9Y4G8 1499 aa14.25□□□□□ -0.13
CSTF1-203ENST00000428552 CFAP43Q8NDM7 1665 aa14.23□□□□□ -0.13
CSTF1-203ENST00000428552 CD109Q6YHK3 1445 aa14.23□□□□□ -0.13
CSTF1-203ENST00000428552 ABCA8O94911 1581 aa14.22□□□□□ -0.13
CSTF1-203ENST00000428552 KIF21BO75037 1637 aa14.22□□□□□ -0.13
CSTF1-203ENST00000428552 FBXO41Q8TF61 875 aa14.17□□□□□ -0.14
CSTF1-203ENST00000428552 ARAP3Q8WWN8 1544 aa14.16□□□□□ -0.14
CSTF1-203ENST00000428552 CTTNBP2Q8WZ74 1663 aa14.16□□□□□ -0.14
CSTF1-203ENST00000428552 ADAMTSL3P82987 1691 aa14.15□□□□□ -0.14
CSTF1-203ENST00000428552 KCNH8Q96L42 1107 aa14.15□□□□□ -0.14
CSTF1-203ENST00000428552 PTPRMP28827 1452 aa14.12□□□□□ -0.15
CSTF1-203ENST00000428552 GOLGA3Q08378 1498 aa14.12□□□□□ -0.15
CSTF1-203ENST00000428552 ABCA9Q8IUA7 1624 aa14.08□□□□□ -0.15
CSTF1-203ENST00000428552 ATP10BO94823 1461 aa14.08□□□□□ -0.16
CSTF1-203ENST00000428552 FRMPD1Q5SYB0 1578 aa14.08□□□□□ -0.16
CSTF1-203ENST00000428552 LMTK3Q96Q04 1460 aa14.06□□□□□ -0.16
CSTF1-203ENST00000428552 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
CSTF1-203ENST00000428552 BCORL1Q5H9F3 1711 aa14.06□□□□□ -0.16
CSTF1-203ENST00000428552 PCF11O94913 1555 aaKnown RBP14.05□□□□□ -0.16
CSTF1-203ENST00000428552 MADDQ8WXG6 1647 aa14.05□□□□□ -0.16
CSTF1-203ENST00000428552 RAPGEF3O95398 923 aa14.05□□□□□ -0.16
CSTF1-203ENST00000428552 ARID3CA6NKF2 412 aa14.03□□□□□ -0.16
CSTF1-203ENST00000428552 PHLDB1Q86UU1 1377 aa14.03□□□□□ -0.16
CSTF1-203ENST00000428552 NEO1Q92859 1461 aa14.02□□□□□ -0.16
CSTF1-203ENST00000428552 CHIC1Q5VXU3 224 aa13.99□□□□□ -0.17
CSTF1-203ENST00000428552 SAMD9Q5K651 1589 aa13.98□□□□□ -0.17
CSTF1-203ENST00000428552 ARHGEF40Q8TER5 1519 aa13.98□□□□□ -0.17
CSTF1-203ENST00000428552 P3H3Q8IVL6 736 aa13.97□□□□□ -0.17
CSTF1-203ENST00000428552 SIGLEC1Q9BZZ2 1709 aa13.97□□□□□ -0.17
CSTF1-203ENST00000428552 RIMS1Q86UR5 1692 aaKnown RBP13.97□□□□□ -0.17
CSTF1-203ENST00000428552 RAPGEF6Q8TEU7 1601 aa13.96□□□□□ -0.17
CSTF1-203ENST00000428552 RICTORQ6R327 1708 aa13.95□□□□□ -0.18
CSTF1-203ENST00000428552 NUP153P49790 1475 aaKnown RBP13.94□□□□□ -0.18
CSTF1-203ENST00000428552 HSPA2P54652 639 aa13.93□□□□□ -0.18
CSTF1-203ENST00000428552 ARID4BQ4LE39 1312 aaPredicted RBP13.92□□□□□ -0.18
CSTF1-203ENST00000428552 FHOD3Q2V2M9 1422 aa13.92□□□□□ -0.18
CSTF1-203ENST00000428552 ZMYM4Q5VZL5 1548 aa13.9□□□□□ -0.18
CSTF1-203ENST00000428552 DENND4BO75064 1496 aaPredicted RBP13.9□□□□□ -0.18
CSTF1-203ENST00000428552 AKNAQ7Z591 1439 aa13.89□□□□□ -0.19
CSTF1-203ENST00000428552 YEATS2Q9ULM3 1422 aa13.89□□□□□ -0.19
CSTF1-203ENST00000428552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.88□□□□□ -0.19
CSTF1-203ENST00000428552 CERKQ8TCT0 537 aa13.87□□□□□ -0.19
CSTF1-203ENST00000428552 TTC37Q6PGP7 1564 aa13.87□□□□□ -0.19
CSTF1-203ENST00000428552 FANCAO15360 1455 aa13.87□□□□□ -0.19
CSTF1-203ENST00000428552 ZFYVE16Q7Z3T8 1539 aa13.85□□□□□ -0.19
CSTF1-203ENST00000428552 CFAP74Q9C0B2 1584 aa13.84□□□□□ -0.19
CSTF1-203ENST00000428552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.84□□□□□ -0.19
CSTF1-203ENST00000428552 HNRNPUL2Q1KMD3 747 aaKnown RBP13.84□□□□□ -0.19
CSTF1-203ENST00000428552 HECW1Q76N89 1606 aa13.83□□□□□ -0.2
CSTF1-203ENST00000428552 EFCAB5A4FU69 1503 aa13.83□□□□□ -0.2
CSTF1-203ENST00000428552 POGZQ7Z3K3 1410 aa13.82□□□□□ -0.2
CSTF1-203ENST00000428552 MAGI2Q86UL8 1455 aa13.82□□□□□ -0.2
CSTF1-203ENST00000428552 FER1L4A9Z1Z3 1794 aa13.82□□□□□ -0.2
CSTF1-203ENST00000428552 PLPPR3Q6T4P5 718 aa13.82□□□□□ -0.2
CSTF1-203ENST00000428552 FAM9AQ8IZU1 332 aaPredicted RBP13.82□□□□□ -0.2
CSTF1-203ENST00000428552 ARHGEF12Q9NZN5 1544 aa13.81□□□□□ -0.2
CSTF1-203ENST00000428552 ILDR2Q71H61 639 aa13.81□□□□□ -0.2
CSTF1-203ENST00000428552 PLEKHD1A6NEE1 506 aa13.79□□□□□ -0.2
CSTF1-203ENST00000428552 CSRNP3Q8WYN3 585 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms