RNA–Protein interactions for RNA: ENST00000427415.1

SDHAP1-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4 BASIC

Gene SDHAP1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-204ENST00000427415 KIAA0586Q9BVV6 1533 aa37.77■■■■□ 3.64
SDHAP1-204ENST00000427415 PRXQ9BXM0 1461 aa37.76■■■■□ 3.63
SDHAP1-204ENST00000427415 CSRNP3Q8WYN3 585 aa37.74■■■■□ 3.63
SDHAP1-204ENST00000427415 ARAP1Q96P48 1450 aa37.68■■■■□ 3.62
SDHAP1-204ENST00000427415 IQGAP2Q13576 1575 aa37.63■■■■□ 3.62
SDHAP1-204ENST00000427415 JPH4Q96JJ6 628 aa37.63■■■■□ 3.61
SDHAP1-204ENST00000427415 FAM9AQ8IZU1 332 aaPredicted RBP37.62■■■■□ 3.61
SDHAP1-204ENST00000427415 CTTNBP2Q8WZ74 1663 aa37.62■■■■□ 3.61
SDHAP1-204ENST00000427415 ERCC6L2Q5T890 1561 aa37.6■■■■□ 3.61
SDHAP1-204ENST00000427415 PRG4Q92954 1404 aaPredicted RBP37.6■■■■□ 3.61
SDHAP1-204ENST00000427415 CYB5RLQ6IPT4 315 aa37.54■■■■□ 3.6
SDHAP1-204ENST00000427415 KIF21BO75037 1637 aa37.51■■■■□ 3.6
SDHAP1-204ENST00000427415 UGGT2Q9NYU1 1516 aa37.4■■■■□ 3.58
SDHAP1-204ENST00000427415 CARMIL2Q6F5E8 1435 aa37.39■■■■□ 3.58
SDHAP1-204ENST00000427415 DISP1Q96F81 1524 aa37.29■■■■□ 3.56
SDHAP1-204ENST00000427415 GOLGA3Q08378 1498 aa37.27■■■■□ 3.56
SDHAP1-204ENST00000427415 KIAA0556O60303 1618 aa37.27■■■■□ 3.56
SDHAP1-204ENST00000427415 TNIKQ9UKE5 1360 aa37.23■■■■□ 3.55
SDHAP1-204ENST00000427415 PTPRGP23470 1445 aa37.17■■■■□ 3.54
SDHAP1-204ENST00000427415 UBTFP17480 764 aaKnown RBP37.1■■■■□ 3.53
SDHAP1-204ENST00000427415 EHMT2Q96KQ7 1210 aa37.1■■■■□ 3.53
SDHAP1-204ENST00000427415 SAMD9Q5K651 1589 aa37.07■■■■□ 3.52
SDHAP1-204ENST00000427415 TTBK1Q5TCY1 1321 aaPredicted RBP37.06■■■■□ 3.52
SDHAP1-204ENST00000427415 ADCY10Q96PN6 1610 aa37.05■■■■□ 3.52
SDHAP1-204ENST00000427415 EFCAB5A4FU69 1503 aa36.97■■■■□ 3.51
SDHAP1-204ENST00000427415 UACAQ9BZF9 1416 aa36.94■■■■□ 3.5
SDHAP1-204ENST00000427415 RANGAP1P46060 587 aaPredicted RBP36.93■■■■□ 3.5
SDHAP1-204ENST00000427415 UHRF1BP1LA0JNW5 1464 aa36.92■■■■□ 3.5
SDHAP1-204ENST00000427415 ABCC2Q92887 1545 aa36.9■■■■□ 3.5
SDHAP1-204ENST00000427415 NPM1P06748 294 aaKnown RBP eCLIP36.88■■■■□ 3.49
SDHAP1-204ENST00000427415 P3H3Q8IVL6 736 aa36.88■■■■□ 3.49
SDHAP1-204ENST00000427415 ABCA8O94911 1581 aa36.82■■■■□ 3.48
SDHAP1-204ENST00000427415 PLB1Q6P1J6 1458 aa36.82■■■■□ 3.48
SDHAP1-204ENST00000427415 FHOD3Q2V2M9 1422 aa36.8■■■■□ 3.48
SDHAP1-204ENST00000427415 MAPKBP1O60336 1514 aa36.8■■■■□ 3.48
SDHAP1-204ENST00000427415 TRHP20396 242 aaPredicted RBP36.75■■■■□ 3.47
SDHAP1-204ENST00000427415 KDM5BQ9UGL1 1544 aa36.73■■■■□ 3.47
SDHAP1-204ENST00000427415 ARHGAP35Q9NRY4 1499 aa36.72■■■■□ 3.47
SDHAP1-204ENST00000427415 ZCCHC11Q5TAX3 1644 aaKnown RBP36.7■■■■□ 3.47
SDHAP1-204ENST00000427415 RAPGEF6Q8TEU7 1601 aa36.7■■■■□ 3.47
SDHAP1-204ENST00000427415 KIF13AQ9H1H9 1805 aa36.61■■■■□ 3.45
SDHAP1-204ENST00000427415 FMN1Q68DA7 1419 aa36.59■■■■□ 3.45
SDHAP1-204ENST00000427415 CLIP1P30622 1438 aa36.58■■■■□ 3.45
SDHAP1-204ENST00000427415 ASXL2Q76L83 1435 aa36.58■■■■□ 3.45
SDHAP1-204ENST00000427415 ABCC10Q5T3U5 1492 aa36.56■■■■□ 3.44
SDHAP1-204ENST00000427415 DIP2BQ9P265 1576 aa36.55■■■■□ 3.44
SDHAP1-204ENST00000427415 NUP153P49790 1475 aaKnown RBP36.5■■■■□ 3.43
SDHAP1-204ENST00000427415 LOC105371045A0A1W2PR82 267 aa36.47■■■■□ 3.43
SDHAP1-204ENST00000427415 ATP10BO94823 1461 aa36.46■■■■□ 3.43
SDHAP1-204ENST00000427415 CEP162Q5TB80 1403 aa36.46■■■■□ 3.43
SDHAP1-204ENST00000427415 HECW1Q76N89 1606 aa36.45■■■■□ 3.43
SDHAP1-204ENST00000427415 WDR7Q9Y4E6 1490 aa36.45■■■■□ 3.43
SDHAP1-204ENST00000427415 FAM69CQ0P6D2 419 aa36.43■■■■□ 3.42
SDHAP1-204ENST00000427415 ARID3CA6NKF2 412 aa36.42■■■■□ 3.42
SDHAP1-204ENST00000427415 GLI2P10070 1586 aa36.38■■■■□ 3.41
SDHAP1-204ENST00000427415 EPRSP07814 1512 aaKnown RBP36.37■■■■□ 3.41
SDHAP1-204ENST00000427415 PCF11O94913 1555 aaKnown RBP36.34■■■■□ 3.41
SDHAP1-204ENST00000427415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.33■■■■□ 3.41
SDHAP1-204ENST00000427415 HNRNPUL2Q1KMD3 747 aaKnown RBP36.33■■■■□ 3.41
SDHAP1-204ENST00000427415 TSPOAP1O95153 1857 aa36.29■■■■□ 3.4
SDHAP1-204ENST00000427415 CASKIN1Q8WXD9 1431 aa36.29■■■■□ 3.4
SDHAP1-204ENST00000427415 ATP1B4Q9UN42 357 aaPredicted RBP36.29■■■■□ 3.4
SDHAP1-204ENST00000427415 CDK13Q14004 1512 aaKnown RBP36.28■■■■□ 3.4
SDHAP1-204ENST00000427415 FYCO1Q9BQS8 1478 aa36.26■■■■□ 3.4
SDHAP1-204ENST00000427415 MAP3K4Q9Y6R4 1608 aa36.24■■■■□ 3.39
SDHAP1-204ENST00000427415 LRRIQ1Q96JM4 1722 aa36.23■■■■□ 3.39
SDHAP1-204ENST00000427415 CFAP43Q8NDM7 1665 aa36.2■■■■□ 3.39
SDHAP1-204ENST00000427415 KCNH8Q96L42 1107 aa36.2■■■■□ 3.39
SDHAP1-204ENST00000427415 CCDC18Q5T9S5 1454 aa36.18■■■■□ 3.38
SDHAP1-204ENST00000427415 PLEKHD1A6NEE1 506 aa36.18■■■■□ 3.38
SDHAP1-204ENST00000427415 PPRC1Q5VV67 1664 aaKnown RBP36.13■■■■□ 3.37
SDHAP1-204ENST00000427415 ABCA9Q8IUA7 1624 aa36.12■■■■□ 3.37
SDHAP1-204ENST00000427415 CDK11AQ9UQ88 783 aaPredicted RBP36.11■■■■□ 3.37
SDHAP1-204ENST00000427415 TEX14Q8IWB6 1497 aa36.06■■■■□ 3.36
SDHAP1-204ENST00000427415 CD109Q6YHK3 1445 aa36.06■■■■□ 3.36
SDHAP1-204ENST00000427415 VPS8Q8N3P4 1428 aa36.02■■■■□ 3.36
SDHAP1-204ENST00000427415 MAGI3Q5TCQ9 1506 aa36.01■■■■□ 3.36
SDHAP1-204ENST00000427415 TROQ12816 1431 aaPredicted RBP36■■■■□ 3.35
SDHAP1-204ENST00000427415 KIF14Q15058 1648 aa35.97■■■■□ 3.35
SDHAP1-204ENST00000427415 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.96■■■■□ 3.35
SDHAP1-204ENST00000427415 KDM6BO15054 1643 aa35.94■■■■□ 3.34
SDHAP1-204ENST00000427415 TTC37Q6PGP7 1564 aa35.93■■■■□ 3.34
SDHAP1-204ENST00000427415 MYO5CQ9NQX4 1742 aa35.84■■■■□ 3.33
SDHAP1-204ENST00000427415 CFAP74Q9C0B2 1584 aa35.81■■■■□ 3.32
SDHAP1-204ENST00000427415 MTUS2Q5JR59 1369 aa35.79■■■■□ 3.32
SDHAP1-204ENST00000427415 TIAM1Q13009 1591 aa35.79■■■■□ 3.32
SDHAP1-204ENST00000427415 NEO1Q92859 1461 aa35.78■■■■□ 3.32
SDHAP1-204ENST00000427415 EHBP1L1Q8N3D4 1523 aa35.78■■■■□ 3.32
SDHAP1-204ENST00000427415 PHLDB1Q86UU1 1377 aa35.76■■■■□ 3.32
SDHAP1-204ENST00000427415 ARAP3Q8WWN8 1544 aa35.73■■■■□ 3.31
SDHAP1-204ENST00000427415 PLCH2O75038 1416 aa35.73■■■■□ 3.31
SDHAP1-204ENST00000427415 FANCAO15360 1455 aa35.73■■■■□ 3.31
SDHAP1-204ENST00000427415 MAP3K1Q13233 1512 aa35.71■■■■□ 3.31
SDHAP1-204ENST00000427415 COL17A1Q9UMD9 1497 aaPredicted RBP35.68■■■■□ 3.3
SDHAP1-204ENST00000427415 PREX2Q70Z35 1606 aa35.68■■■■□ 3.3
SDHAP1-204ENST00000427415 CDC42BPAQ5VT25 1732 aa35.66■■■■□ 3.3
SDHAP1-204ENST00000427415 ARHGAP5Q13017 1502 aa35.64■■■■□ 3.3
SDHAP1-204ENST00000427415 CDC42BPBQ9Y5S2 1711 aa35.64■■■■□ 3.3
SDHAP1-204ENST00000427415 SUPT6HQ7KZ85 1726 aaKnown RBP35.63■■■■□ 3.29
SDHAP1-204ENST00000427415 AKNAQ7Z591 1439 aa35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms