RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 RIMBP3CA6NJZ7 1639 aa20.81■□□□□ 0.92
SMIM12-203ENST00000426886 RIMBP3BA6NNM3 1639 aa20.81■□□□□ 0.92
SMIM12-203ENST00000426886 RIMBP3Q9UFD9 1639 aa20.81■□□□□ 0.92
SMIM12-203ENST00000426886 EEA1Q15075 1411 aa20.76■□□□□ 0.91
SMIM12-203ENST00000426886 PRXQ9BXM0 1461 aa20.76■□□□□ 0.91
SMIM12-203ENST00000426886 KIAA0586Q9BVV6 1533 aa20.73■□□□□ 0.91
SMIM12-203ENST00000426886 PRG4Q92954 1404 aaPredicted RBP20.72■□□□□ 0.91
SMIM12-203ENST00000426886 ERCC6L2Q5T890 1561 aa20.71■□□□□ 0.91
SMIM12-203ENST00000426886 TTBK1Q5TCY1 1321 aaPredicted RBP20.71■□□□□ 0.91
SMIM12-203ENST00000426886 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
SMIM12-203ENST00000426886 RANGAP1P46060 587 aaPredicted RBP20.67■□□□□ 0.9
SMIM12-203ENST00000426886 SHROOM2Q13796 1616 aa20.63■□□□□ 0.89
SMIM12-203ENST00000426886 IQGAP2Q13576 1575 aa20.62■□□□□ 0.89
SMIM12-203ENST00000426886 UBTFP17480 764 aaKnown RBP20.61■□□□□ 0.89
SMIM12-203ENST00000426886 P3H3Q8IVL6 736 aa20.56■□□□□ 0.88
SMIM12-203ENST00000426886 CARMIL2Q6F5E8 1435 aa20.54■□□□□ 0.88
SMIM12-203ENST00000426886 KIF21BO75037 1637 aa20.51■□□□□ 0.87
SMIM12-203ENST00000426886 CTTNBP2Q8WZ74 1663 aa20.5■□□□□ 0.87
SMIM12-203ENST00000426886 DISP1Q96F81 1524 aa20.5■□□□□ 0.87
SMIM12-203ENST00000426886 PTPRGP23470 1445 aa20.5■□□□□ 0.87
SMIM12-203ENST00000426886 GOLGA3Q08378 1498 aa20.48■□□□□ 0.87
SMIM12-203ENST00000426886 UGGT2Q9NYU1 1516 aa20.48■□□□□ 0.87
SMIM12-203ENST00000426886 TNIKQ9UKE5 1360 aa20.47■□□□□ 0.87
SMIM12-203ENST00000426886 KIAA0556O60303 1618 aa20.41■□□□□ 0.86
SMIM12-203ENST00000426886 LOC105371045A0A1W2PR82 267 aa20.4■□□□□ 0.86
SMIM12-203ENST00000426886 TRHP20396 242 aaPredicted RBP20.4■□□□□ 0.86
SMIM12-203ENST00000426886 NPM1P06748 294 aaKnown RBP eCLIP20.38■□□□□ 0.85
SMIM12-203ENST00000426886 ARID3CA6NKF2 412 aa20.34■□□□□ 0.85
SMIM12-203ENST00000426886 FHOD3Q2V2M9 1422 aa20.33■□□□□ 0.84
SMIM12-203ENST00000426886 UACAQ9BZF9 1416 aa20.32■□□□□ 0.84
SMIM12-203ENST00000426886 PLB1Q6P1J6 1458 aa20.31■□□□□ 0.84
SMIM12-203ENST00000426886 ADCY10Q96PN6 1610 aa20.3■□□□□ 0.84
SMIM12-203ENST00000426886 SAMD9Q5K651 1589 aa20.27■□□□□ 0.84
SMIM12-203ENST00000426886 ATP1B4Q9UN42 357 aaPredicted RBP20.24■□□□□ 0.83
SMIM12-203ENST00000426886 ARHGAP35Q9NRY4 1499 aa20.23■□□□□ 0.83
SMIM12-203ENST00000426886 ABCC2Q92887 1545 aa20.22■□□□□ 0.83
SMIM12-203ENST00000426886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.21■□□□□ 0.83
SMIM12-203ENST00000426886 HNRNPUL2Q1KMD3 747 aaKnown RBP20.21■□□□□ 0.83
SMIM12-203ENST00000426886 EFCAB5A4FU69 1503 aa20.2■□□□□ 0.82
SMIM12-203ENST00000426886 UHRF1BP1LA0JNW5 1464 aa20.2■□□□□ 0.82
SMIM12-203ENST00000426886 CLIP1P30622 1438 aa20.18■□□□□ 0.82
SMIM12-203ENST00000426886 FAM69CQ0P6D2 419 aa20.17■□□□□ 0.82
SMIM12-203ENST00000426886 ABCA8O94911 1581 aa20.17■□□□□ 0.82
SMIM12-203ENST00000426886 KDM5BQ9UGL1 1544 aa20.14■□□□□ 0.81
SMIM12-203ENST00000426886 ASXL2Q76L83 1435 aa20.13■□□□□ 0.81
SMIM12-203ENST00000426886 KCNH8Q96L42 1107 aa20.13■□□□□ 0.81
SMIM12-203ENST00000426886 CEP162Q5TB80 1403 aa20.12■□□□□ 0.81
SMIM12-203ENST00000426886 MAPKBP1O60336 1514 aa20.1■□□□□ 0.81
SMIM12-203ENST00000426886 ZCCHC11Q5TAX3 1644 aaKnown RBP20.1■□□□□ 0.81
SMIM12-203ENST00000426886 RAPGEF6Q8TEU7 1601 aa20.1■□□□□ 0.81
SMIM12-203ENST00000426886 FMN1Q68DA7 1419 aa20.1■□□□□ 0.81
SMIM12-203ENST00000426886 ATP10BO94823 1461 aa20.09■□□□□ 0.81
SMIM12-203ENST00000426886 NUP153P49790 1475 aaKnown RBP20.08■□□□□ 0.8
SMIM12-203ENST00000426886 ABCC10Q5T3U5 1492 aa20.06■□□□□ 0.8
SMIM12-203ENST00000426886 WDR7Q9Y4E6 1490 aa20.01■□□□□ 0.79
SMIM12-203ENST00000426886 PLEKHD1A6NEE1 506 aa20■□□□□ 0.79
SMIM12-203ENST00000426886 DIP2BQ9P265 1576 aa20■□□□□ 0.79
SMIM12-203ENST00000426886 CDK13Q14004 1512 aaKnown RBP19.99■□□□□ 0.79
SMIM12-203ENST00000426886 EPRSP07814 1512 aaKnown RBP19.98■□□□□ 0.79
SMIM12-203ENST00000426886 KIF13AQ9H1H9 1805 aa19.97■□□□□ 0.79
SMIM12-203ENST00000426886 CASKIN1Q8WXD9 1431 aa19.94■□□□□ 0.78
SMIM12-203ENST00000426886 PCF11O94913 1555 aaKnown RBP19.94■□□□□ 0.78
SMIM12-203ENST00000426886 HECW1Q76N89 1606 aa19.93■□□□□ 0.78
SMIM12-203ENST00000426886 CDK11AQ9UQ88 783 aaPredicted RBP19.91■□□□□ 0.78
SMIM12-203ENST00000426886 TSPOAP1O95153 1857 aa19.91■□□□□ 0.78
SMIM12-203ENST00000426886 FYCO1Q9BQS8 1478 aa19.87■□□□□ 0.77
SMIM12-203ENST00000426886 CD109Q6YHK3 1445 aa19.87■□□□□ 0.77
SMIM12-203ENST00000426886 GLI2P10070 1586 aa19.86■□□□□ 0.77
SMIM12-203ENST00000426886 LRRIQ1Q96JM4 1722 aa19.84■□□□□ 0.77
SMIM12-203ENST00000426886 VPS8Q8N3P4 1428 aa19.83■□□□□ 0.76
SMIM12-203ENST00000426886 CCDC18Q5T9S5 1454 aa19.81■□□□□ 0.76
SMIM12-203ENST00000426886 TROQ12816 1431 aaPredicted RBP19.79■□□□□ 0.76
SMIM12-203ENST00000426886 MAP3K4Q9Y6R4 1608 aa19.79■□□□□ 0.76
SMIM12-203ENST00000426886 MAGI3Q5TCQ9 1506 aa19.76■□□□□ 0.75
SMIM12-203ENST00000426886 MTUS2Q5JR59 1369 aa19.76■□□□□ 0.75
SMIM12-203ENST00000426886 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.75■□□□□ 0.75
SMIM12-203ENST00000426886 PPRC1Q5VV67 1664 aaKnown RBP19.75■□□□□ 0.75
SMIM12-203ENST00000426886 ABCA9Q8IUA7 1624 aa19.74■□□□□ 0.75
SMIM12-203ENST00000426886 TEX14Q8IWB6 1497 aa19.74■□□□□ 0.75
SMIM12-203ENST00000426886 CFAP43Q8NDM7 1665 aa19.74■□□□□ 0.75
SMIM12-203ENST00000426886 APLP2Q06481 763 aa19.73■□□□□ 0.75
SMIM12-203ENST00000426886 KIF14Q15058 1648 aa19.73■□□□□ 0.75
SMIM12-203ENST00000426886 TTC37Q6PGP7 1564 aa19.72■□□□□ 0.75
SMIM12-203ENST00000426886 COL17A1Q9UMD9 1497 aaPredicted RBP19.7■□□□□ 0.74
SMIM12-203ENST00000426886 KANK4Q5T7N3 995 aaPredicted RBP19.7■□□□□ 0.74
SMIM12-203ENST00000426886 KDM6BO15054 1643 aa19.68■□□□□ 0.74
SMIM12-203ENST00000426886 RAPGEF3O95398 923 aa19.67■□□□□ 0.74
SMIM12-203ENST00000426886 ZNF777Q9ULD5 760 aaPredicted RBP19.66■□□□□ 0.74
SMIM12-203ENST00000426886 PLCH2O75038 1416 aa19.65■□□□□ 0.74
SMIM12-203ENST00000426886 FANCAO15360 1455 aa19.65■□□□□ 0.74
SMIM12-203ENST00000426886 EFCAB2Q5VUJ9 269 aa19.65■□□□□ 0.74
SMIM12-203ENST00000426886 TIAM1Q13009 1591 aa19.64■□□□□ 0.73
SMIM12-203ENST00000426886 AKNAQ7Z591 1439 aa19.62■□□□□ 0.73
SMIM12-203ENST00000426886 PPARGC1BQ86YN6 1023 aaKnown RBP19.61■□□□□ 0.73
SMIM12-203ENST00000426886 CCNB3Q8WWL7 1395 aa19.61■□□□□ 0.73
SMIM12-203ENST00000426886 ARHGAP5Q13017 1502 aa19.6■□□□□ 0.73
SMIM12-203ENST00000426886 LRRC9Q6ZRR7 1453 aa19.59■□□□□ 0.73
SMIM12-203ENST00000426886 NEO1Q92859 1461 aa19.59■□□□□ 0.73
SMIM12-203ENST00000426886 CFDP1Q9UEE9 299 aaPredicted RBP19.59■□□□□ 0.73
SMIM12-203ENST00000426886 EHBP1L1Q8N3D4 1523 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms