RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 CTTNBP2Q8WZ74 1663 aa23.83■■□□□ 1.41
GINS3-203ENST00000426538 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
GINS3-203ENST00000426538 ARHGAP35Q9NRY4 1499 aa23.74■■□□□ 1.39
GINS3-203ENST00000426538 VPS8Q8N3P4 1428 aa23.7■■□□□ 1.38
GINS3-203ENST00000426538 KIAA0586Q9BVV6 1533 aa23.69■■□□□ 1.38
GINS3-203ENST00000426538 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
GINS3-203ENST00000426538 IQGAP2Q13576 1575 aa23.68■■□□□ 1.38
GINS3-203ENST00000426538 EFCAB5A4FU69 1503 aa23.67■■□□□ 1.38
GINS3-203ENST00000426538 P3H3Q8IVL6 736 aa23.67■■□□□ 1.38
GINS3-203ENST00000426538 NUP160Q12769 1436 aa23.63■■□□□ 1.37
GINS3-203ENST00000426538 CEP170Q5SW79 1584 aa23.63■■□□□ 1.37
GINS3-203ENST00000426538 APLP2Q06481 763 aa23.61■■□□□ 1.37
GINS3-203ENST00000426538 CHD1O14646 1710 aa23.59■■□□□ 1.37
GINS3-203ENST00000426538 FHOD3Q2V2M9 1422 aa23.57■■□□□ 1.36
GINS3-203ENST00000426538 SAMD9Q5K651 1589 aa23.57■■□□□ 1.36
GINS3-203ENST00000426538 UGGT2Q9NYU1 1516 aa23.56■■□□□ 1.36
GINS3-203ENST00000426538 PPARGC1BQ86YN6 1023 aaKnown RBP23.53■■□□□ 1.36
GINS3-203ENST00000426538 JPH4Q96JJ6 628 aa23.53■■□□□ 1.36
GINS3-203ENST00000426538 FMN1Q68DA7 1419 aa23.5■■□□□ 1.35
GINS3-203ENST00000426538 ATP1B4Q9UN42 357 aaPredicted RBP23.45■■□□□ 1.34
GINS3-203ENST00000426538 CARMIL2Q6F5E8 1435 aa23.45■■□□□ 1.34
GINS3-203ENST00000426538 DISP1Q96F81 1524 aa23.44■■□□□ 1.34
GINS3-203ENST00000426538 KIAA0556O60303 1618 aa23.42■■□□□ 1.34
GINS3-203ENST00000426538 TRIM26Q12899 539 aaPredicted RBP23.42■■□□□ 1.34
GINS3-203ENST00000426538 TTBK1Q5TCY1 1321 aaPredicted RBP23.4■■□□□ 1.34
GINS3-203ENST00000426538 CASKIN1Q8WXD9 1431 aa23.4■■□□□ 1.34
GINS3-203ENST00000426538 FYCO1Q9BQS8 1478 aa23.38■■□□□ 1.33
GINS3-203ENST00000426538 PCF11O94913 1555 aaKnown RBP23.37■■□□□ 1.33
GINS3-203ENST00000426538 PRG4Q92954 1404 aaPredicted RBP23.36■■□□□ 1.33
GINS3-203ENST00000426538 PCGF6Q9BYE7 350 aa23.35■■□□□ 1.33
GINS3-203ENST00000426538 OSCARQ8IYS5 282 aa23.33■■□□□ 1.32
GINS3-203ENST00000426538 CLASP1Q7Z460 1538 aa23.32■■□□□ 1.32
GINS3-203ENST00000426538 MAP3K1Q13233 1512 aa23.31■■□□□ 1.32
GINS3-203ENST00000426538 SHROOM2Q13796 1616 aa23.3■■□□□ 1.32
GINS3-203ENST00000426538 KANK4Q5T7N3 995 aaPredicted RBP23.29■■□□□ 1.32
GINS3-203ENST00000426538 TIAM1Q13009 1591 aa23.28■■□□□ 1.32
GINS3-203ENST00000426538 HECW1Q76N89 1606 aa23.23■■□□□ 1.31
GINS3-203ENST00000426538 PTPRGP23470 1445 aa23.22■■□□□ 1.31
GINS3-203ENST00000426538 CFAP43Q8NDM7 1665 aa23.2■■□□□ 1.3
GINS3-203ENST00000426538 CCDC18Q5T9S5 1454 aa23.2■■□□□ 1.3
GINS3-203ENST00000426538 LRRC9Q6ZRR7 1453 aa23.19■■□□□ 1.3
GINS3-203ENST00000426538 RAPGEF6Q8TEU7 1601 aa23.19■■□□□ 1.3
GINS3-203ENST00000426538 PLB1Q6P1J6 1458 aa23.17■■□□□ 1.3
GINS3-203ENST00000426538 EPRSP07814 1512 aaKnown RBP23.16■■□□□ 1.3
GINS3-203ENST00000426538 LRRIQ1Q96JM4 1722 aa23.15■■□□□ 1.3
GINS3-203ENST00000426538 ERCC6L2Q5T890 1561 aa23.14■■□□□ 1.3
GINS3-203ENST00000426538 ARID3CA6NKF2 412 aa23.14■■□□□ 1.3
GINS3-203ENST00000426538 MTUS2Q5JR59 1369 aa23.14■■□□□ 1.29
GINS3-203ENST00000426538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.13■■□□□ 1.29
GINS3-203ENST00000426538 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
GINS3-203ENST00000426538 NUP153P49790 1475 aaKnown RBP23.12■■□□□ 1.29
GINS3-203ENST00000426538 CDK11AQ9UQ88 783 aaPredicted RBP23.1■■□□□ 1.29
GINS3-203ENST00000426538 ABCA8O94911 1581 aa23.1■■□□□ 1.29
GINS3-203ENST00000426538 CDK13Q14004 1512 aaKnown RBP23.09■■□□□ 1.29
GINS3-203ENST00000426538 UACAQ9BZF9 1416 aa23.06■■□□□ 1.28
GINS3-203ENST00000426538 EHBP1L1Q8N3D4 1523 aa23.03■■□□□ 1.28
GINS3-203ENST00000426538 MAGI3Q5TCQ9 1506 aa22.98■■□□□ 1.27
GINS3-203ENST00000426538 ATP10BO94823 1461 aa22.98■■□□□ 1.27
GINS3-203ENST00000426538 SUPT6HQ7KZ85 1726 aaKnown RBP22.97■■□□□ 1.27
GINS3-203ENST00000426538 PHLDB1Q86UU1 1377 aa22.97■■□□□ 1.27
GINS3-203ENST00000426538 PLEKHD1A6NEE1 506 aa22.96■■□□□ 1.27
GINS3-203ENST00000426538 ABCC2Q92887 1545 aa22.96■■□□□ 1.27
GINS3-203ENST00000426538 RRBP1Q9P2E9 1410 aaKnown RBP22.95■■□□□ 1.26
GINS3-203ENST00000426538 NCOA2Q15596 1464 aa22.94■■□□□ 1.26
GINS3-203ENST00000426538 CCNB3Q8WWL7 1395 aa22.93■■□□□ 1.26
GINS3-203ENST00000426538 UHRF1BP1LA0JNW5 1464 aa22.92■■□□□ 1.26
GINS3-203ENST00000426538 TROQ12816 1431 aaPredicted RBP22.92■■□□□ 1.26
GINS3-203ENST00000426538 ARHGEF11O15085 1522 aa22.86■■□□□ 1.25
GINS3-203ENST00000426538 MYOM3Q5VTT5 1437 aa22.85■■□□□ 1.25
GINS3-203ENST00000426538 FAM50AQ14320 339 aaKnown RBP22.85■■□□□ 1.25
GINS3-203ENST00000426538 KDM5BQ9UGL1 1544 aa22.83■■□□□ 1.24
GINS3-203ENST00000426538 FGD6Q6ZV73 1430 aa22.82■■□□□ 1.24
GINS3-203ENST00000426538 ADCY10Q96PN6 1610 aa22.8■■□□□ 1.24
GINS3-203ENST00000426538 ZCCHC11Q5TAX3 1644 aaKnown RBP22.79■■□□□ 1.24
GINS3-203ENST00000426538 NPM1P06748 294 aaKnown RBP eCLIP22.79■■□□□ 1.24
GINS3-203ENST00000426538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.78■■□□□ 1.24
GINS3-203ENST00000426538 KIF14Q15058 1648 aa22.77■■□□□ 1.24
GINS3-203ENST00000426538 ITGAEP38570 1179 aa22.77■■□□□ 1.24
GINS3-203ENST00000426538 MIA2Q96PC5 1412 aa22.76■■□□□ 1.23
GINS3-203ENST00000426538 RIMBP3CA6NJZ7 1639 aa22.72■■□□□ 1.23
GINS3-203ENST00000426538 RIMBP3BA6NNM3 1639 aa22.72■■□□□ 1.23
GINS3-203ENST00000426538 RIMBP3Q9UFD9 1639 aa22.72■■□□□ 1.23
GINS3-203ENST00000426538 CYB5RLQ6IPT4 315 aa22.72■■□□□ 1.23
GINS3-203ENST00000426538 KCNH8Q96L42 1107 aa22.72■■□□□ 1.23
GINS3-203ENST00000426538 PTPN23Q9H3S7 1636 aa22.71■■□□□ 1.23
GINS3-203ENST00000426538 CFDP1Q9UEE9 299 aaPredicted RBP22.71■■□□□ 1.23
GINS3-203ENST00000426538 GPATCH8Q9UKJ3 1502 aaKnown RBP22.69■■□□□ 1.22
GINS3-203ENST00000426538 ABCC10Q5T3U5 1492 aa22.68■■□□□ 1.22
GINS3-203ENST00000426538 ITSN2Q9NZM3 1697 aa22.68■■□□□ 1.22
GINS3-203ENST00000426538 TCOF1Q13428 1488 aaKnown RBP22.66■■□□□ 1.22
GINS3-203ENST00000426538 ZNF777Q9ULD5 760 aaPredicted RBP22.63■■□□□ 1.21
GINS3-203ENST00000426538 WDR7Q9Y4E6 1490 aa22.63■■□□□ 1.21
GINS3-203ENST00000426538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.61■■□□□ 1.21
GINS3-203ENST00000426538 ASXL2Q76L83 1435 aa22.61■■□□□ 1.21
GINS3-203ENST00000426538 CDC42BPAQ5VT25 1732 aa22.61■■□□□ 1.21
GINS3-203ENST00000426538 ZNF644Q9H582 1327 aaPredicted RBP22.6■■□□□ 1.21
GINS3-203ENST00000426538 TTC37Q6PGP7 1564 aa22.56■■□□□ 1.2
GINS3-203ENST00000426538 CAMSAP2Q08AD1 1489 aa22.55■■□□□ 1.2
GINS3-203ENST00000426538 CCER1Q8TC90 406 aaPredicted RBP22.54■■□□□ 1.2
GINS3-203ENST00000426538 PREX2Q70Z35 1606 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms