RNA–Protein interactions for RNA: ENST00000426530.2

PTPMT1-203, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-203ENST00000426530 PRG4Q92954 1404 aaPredicted RBP43.29■■■■■ 4.52
PTPMT1-203ENST00000426530 JPH4Q96JJ6 628 aa43.24■■■■■ 4.51
PTPMT1-203ENST00000426530 KIAA0586Q9BVV6 1533 aa43.09■■■■■ 4.49
PTPMT1-203ENST00000426530 CARMIL1Q5VZK9 1371 aa43.09■■■■■ 4.49
PTPMT1-203ENST00000426530 ADCY10Q96PN6 1610 aa42.81■■■■■ 4.44
PTPMT1-203ENST00000426530 IQGAP2Q13576 1575 aa42.8■■■■■ 4.44
PTPMT1-203ENST00000426530 RAPGEF2Q9Y4G8 1499 aa42.75■■■■■ 4.43
PTPMT1-203ENST00000426530 KIF13AQ9H1H9 1805 aa42.74■■■■■ 4.43
PTPMT1-203ENST00000426530 TTBK1Q5TCY1 1321 aaPredicted RBP42.69■■■■■ 4.42
PTPMT1-203ENST00000426530 CARMIL2Q6F5E8 1435 aa42.63■■■■■ 4.42
PTPMT1-203ENST00000426530 NPM1P06748 294 aaKnown RBP eCLIP42.63■■■■■ 4.41
PTPMT1-203ENST00000426530 PTPRGP23470 1445 aa42.63■■■■■ 4.41
PTPMT1-203ENST00000426530 MAPKBP1O60336 1514 aa42.6■■■■■ 4.41
PTPMT1-203ENST00000426530 TNIKQ9UKE5 1360 aa42.57■■■■■ 4.41
PTPMT1-203ENST00000426530 DISP1Q96F81 1524 aa42.56■■■■■ 4.4
PTPMT1-203ENST00000426530 ABCC10Q5T3U5 1492 aa42.51■■■■■ 4.4
PTPMT1-203ENST00000426530 UGGT2Q9NYU1 1516 aa42.51■■■■■ 4.39
PTPMT1-203ENST00000426530 DIP2BQ9P265 1576 aa42.49■■■■■ 4.39
PTPMT1-203ENST00000426530 CTTNBP2Q8WZ74 1663 aa42.49■■■■■ 4.39
PTPMT1-203ENST00000426530 FAM69CQ0P6D2 419 aa42.46■■■■■ 4.39
PTPMT1-203ENST00000426530 KIAA0556O60303 1618 aa42.43■■■■■ 4.38
PTPMT1-203ENST00000426530 PRXQ9BXM0 1461 aa42.41■■■■■ 4.38
PTPMT1-203ENST00000426530 ABCC2Q92887 1545 aa42.37■■■■■ 4.37
PTPMT1-203ENST00000426530 UACAQ9BZF9 1416 aa42.32■■■■■ 4.37
PTPMT1-203ENST00000426530 UHRF1BP1LA0JNW5 1464 aa42.3■■■■■ 4.36
PTPMT1-203ENST00000426530 TSPOAP1O95153 1857 aa42.26■■■■■ 4.35
PTPMT1-203ENST00000426530 ASXL2Q76L83 1435 aa42.21■■■■■ 4.35
PTPMT1-203ENST00000426530 GOLGA3Q08378 1498 aa42.15■■■■■ 4.34
PTPMT1-203ENST00000426530 ZCCHC11Q5TAX3 1644 aaKnown RBP42.14■■■■■ 4.34
PTPMT1-203ENST00000426530 CSRNP3Q8WYN3 585 aa42.14■■■■■ 4.34
PTPMT1-203ENST00000426530 KDM5BQ9UGL1 1544 aa42.13■■■■■ 4.33
PTPMT1-203ENST00000426530 PLB1Q6P1J6 1458 aa42.12■■■■■ 4.33
PTPMT1-203ENST00000426530 KDM6BO15054 1643 aa42.02■■■■■ 4.32
PTPMT1-203ENST00000426530 GLI2P10070 1586 aa42.01■■■■■ 4.32
PTPMT1-203ENST00000426530 EEA1Q15075 1411 aa42■■■■■ 4.31
PTPMT1-203ENST00000426530 ABCA8O94911 1581 aa41.99■■■■■ 4.31
PTPMT1-203ENST00000426530 FAM9AQ8IZU1 332 aaPredicted RBP41.99■■■■■ 4.31
PTPMT1-203ENST00000426530 PPRC1Q5VV67 1664 aaKnown RBP41.97■■■■■ 4.31
PTPMT1-203ENST00000426530 EPRSP07814 1512 aaKnown RBP41.95■■■■■ 4.31
PTPMT1-203ENST00000426530 P3H3Q8IVL6 736 aa41.93■■■■■ 4.3
PTPMT1-203ENST00000426530 AEBP2Q6ZN18 517 aaPredicted RBP41.9■■■■■ 4.3
PTPMT1-203ENST00000426530 SAMD9Q5K651 1589 aa41.86■■■■■ 4.29
PTPMT1-203ENST00000426530 MAP3K4Q9Y6R4 1608 aa41.86■■■■■ 4.29
PTPMT1-203ENST00000426530 WDR7Q9Y4E6 1490 aa41.85■■■■■ 4.29
PTPMT1-203ENST00000426530 RANGAP1P46060 587 aaPredicted RBP41.77■■■■■ 4.28
PTPMT1-203ENST00000426530 KIF21BO75037 1637 aa41.75■■■■■ 4.27
PTPMT1-203ENST00000426530 ARID3CA6NKF2 412 aa41.74■■■■■ 4.27
PTPMT1-203ENST00000426530 CHIC1Q5VXU3 224 aa41.73■■■■■ 4.27
PTPMT1-203ENST00000426530 KCNH8Q96L42 1107 aa41.65■■■■■ 4.26
PTPMT1-203ENST00000426530 RAPGEF6Q8TEU7 1601 aa41.64■■■■■ 4.26
PTPMT1-203ENST00000426530 TEX14Q8IWB6 1497 aa41.64■■■■■ 4.26
PTPMT1-203ENST00000426530 FHOD3Q2V2M9 1422 aa41.62■■■■■ 4.25
PTPMT1-203ENST00000426530 ATP10BO94823 1461 aa41.62■■■■■ 4.25
PTPMT1-203ENST00000426530 COL17A1Q9UMD9 1497 aaPredicted RBP41.62■■■■■ 4.25
PTPMT1-203ENST00000426530 EHMT2Q96KQ7 1210 aa41.6■■■■■ 4.25
PTPMT1-203ENST00000426530 CFAP43Q8NDM7 1665 aa41.6■■■■■ 4.25
PTPMT1-203ENST00000426530 CD109Q6YHK3 1445 aa41.53■■■■■ 4.24
PTPMT1-203ENST00000426530 MAGI3Q5TCQ9 1506 aa41.48■■■■■ 4.23
PTPMT1-203ENST00000426530 EFCAB5A4FU69 1503 aa41.47■■■■■ 4.23
PTPMT1-203ENST00000426530 NUP153P49790 1475 aaKnown RBP41.47■■■■■ 4.23
PTPMT1-203ENST00000426530 KDM4FA0A1W2PPD8 638 aa41.4■■■■■ 4.22
PTPMT1-203ENST00000426530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.4■■■■■ 4.22
PTPMT1-203ENST00000426530 HNRNPUL2Q1KMD3 747 aaKnown RBP41.4■■■■■ 4.22
PTPMT1-203ENST00000426530 UBTFP17480 764 aaKnown RBP41.39■■■■■ 4.22
PTPMT1-203ENST00000426530 ABCA9Q8IUA7 1624 aa41.35■■■■■ 4.21
PTPMT1-203ENST00000426530 ADGRL1O94910 1474 aa41.21■■■■■ 4.19
PTPMT1-203ENST00000426530 ARHGAP35Q9NRY4 1499 aa41.2■■■■■ 4.19
PTPMT1-203ENST00000426530 CDK13Q14004 1512 aaKnown RBP41.17■■■■■ 4.18
PTPMT1-203ENST00000426530 ARAP3Q8WWN8 1544 aa41.13■■■■■ 4.18
PTPMT1-203ENST00000426530 PLEKHD1A6NEE1 506 aa41.11■■■■■ 4.17
PTPMT1-203ENST00000426530 FMN1Q68DA7 1419 aa41.06■■■■■ 4.16
PTPMT1-203ENST00000426530 HECW1Q76N89 1606 aa41.05■■■■■ 4.16
PTPMT1-203ENST00000426530 ATP1B4Q9UN42 357 aaPredicted RBP41.04■■■■■ 4.16
PTPMT1-203ENST00000426530 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.03■■■■■ 4.16
PTPMT1-203ENST00000426530 NEO1Q92859 1461 aa41.03■■■■■ 4.16
PTPMT1-203ENST00000426530 TTC37Q6PGP7 1564 aa41.03■■■■■ 4.16
PTPMT1-203ENST00000426530 PHLDB1Q86UU1 1377 aa40.99■■■■■ 4.15
PTPMT1-203ENST00000426530 RAPGEF3O95398 923 aa40.96■■■■■ 4.15
PTPMT1-203ENST00000426530 FRMPD1Q5SYB0 1578 aa40.95■■■■■ 4.15
PTPMT1-203ENST00000426530 LRRIQ1Q96JM4 1722 aa40.9■■■■■ 4.14
PTPMT1-203ENST00000426530 FANCAO15360 1455 aa40.87■■■■■ 4.13
PTPMT1-203ENST00000426530 CFAP74Q9C0B2 1584 aa40.86■■■■■ 4.13
PTPMT1-203ENST00000426530 AKNAQ7Z591 1439 aa40.83■■■■■ 4.13
PTPMT1-203ENST00000426530 PCF11O94913 1555 aaKnown RBP40.81■■■■■ 4.12
PTPMT1-203ENST00000426530 RICTORQ6R327 1708 aa40.8■■■■■ 4.12
PTPMT1-203ENST00000426530 KIF14Q15058 1648 aa40.79■■■■■ 4.12
PTPMT1-203ENST00000426530 DENND4BO75064 1496 aaPredicted RBP40.77■■■■■ 4.12
PTPMT1-203ENST00000426530 MYO5CQ9NQX4 1742 aa40.73■■■■■ 4.11
PTPMT1-203ENST00000426530 CDK11AQ9UQ88 783 aaPredicted RBP40.71■■■■■ 4.11
PTPMT1-203ENST00000426530 PLCH2O75038 1416 aa40.7■■■■■ 4.11
PTPMT1-203ENST00000426530 TROQ12816 1431 aaPredicted RBP40.7■■■■■ 4.11
PTPMT1-203ENST00000426530 CASKIN1Q8WXD9 1431 aa40.68■■■■■ 4.1
PTPMT1-203ENST00000426530 ARHGEF40Q8TER5 1519 aa40.67■■■■■ 4.1
PTPMT1-203ENST00000426530 CLIP1P30622 1438 aa40.67■■■■■ 4.1
PTPMT1-203ENST00000426530 ZMYM4Q5VZL5 1548 aa40.6■■■■■ 4.09
PTPMT1-203ENST00000426530 CCDC18Q5T9S5 1454 aa40.59■■■■■ 4.09
PTPMT1-203ENST00000426530 ADAMTSL3P82987 1691 aa40.59■■■■■ 4.09
PTPMT1-203ENST00000426530 SCAPERQ9BY12 1400 aa40.58■■■■■ 4.09
PTPMT1-203ENST00000426530 BCORL1Q5H9F3 1711 aa40.56■■■■■ 4.08
PTPMT1-203ENST00000426530 FYCO1Q9BQS8 1478 aa40.56■■■■■ 4.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms