RNA–Protein interactions for RNA: ENST00000426508.6

IFT140-203, Transcript of intraflagellar transport 140, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IFT140, Length 5,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-203ENST00000426508 SCAF1Q9H7N4 1312 aaKnown RBP23.16■■□□□ 1.3
IFT140-203ENST00000426508 VPS8Q8N3P4 1428 aa23.11■■□□□ 1.29
IFT140-203ENST00000426508 RRP7BPQ9NSQ0 103 aa23.1■■□□□ 1.29
IFT140-203ENST00000426508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.1■■□□□ 1.29
IFT140-203ENST00000426508 RTL5Q5HYW3 569 aaPredicted RBP23.1■■□□□ 1.29
IFT140-203ENST00000426508 CFDP1Q9UEE9 299 aaPredicted RBP23.09■■□□□ 1.29
IFT140-203ENST00000426508 ESF1Q9H501 851 aaKnown RBP23.08■■□□□ 1.29
IFT140-203ENST00000426508 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
IFT140-203ENST00000426508 RUSC2Q8N2Y8 1516 aa23.01■■□□□ 1.27
IFT140-203ENST00000426508 CHGAP10645 457 aaKnown RBP22.99■■□□□ 1.27
IFT140-203ENST00000426508 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
IFT140-203ENST00000426508 MIER1Q8N108 512 aa22.96■■□□□ 1.27
IFT140-203ENST00000426508 CARMIL2Q6F5E8 1435 aa22.96■■□□□ 1.27
IFT140-203ENST00000426508 CCNB3Q8WWL7 1395 aa22.95■■□□□ 1.26
IFT140-203ENST00000426508 FMN1Q68DA7 1419 aa22.93■■□□□ 1.26
IFT140-203ENST00000426508 STAG3Q9UJ98 1225 aa22.92■■□□□ 1.26
IFT140-203ENST00000426508 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
IFT140-203ENST00000426508 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
IFT140-203ENST00000426508 FKBP8Q14318 412 aa22.91■■□□□ 1.26
IFT140-203ENST00000426508 DDX10Q13206 875 aaKnown RBP22.9■■□□□ 1.26
IFT140-203ENST00000426508 CC2D2AQ9P2K1 1620 aa22.89■■□□□ 1.26
IFT140-203ENST00000426508 KANK4Q5T7N3 995 aaPredicted RBP22.89■■□□□ 1.25
IFT140-203ENST00000426508 CFTRP13569 1480 aa22.88■■□□□ 1.25
IFT140-203ENST00000426508 KDM2AQ9Y2K7 1162 aa22.82■■□□□ 1.24
IFT140-203ENST00000426508 ARHGAP35Q9NRY4 1499 aa22.82■■□□□ 1.24
IFT140-203ENST00000426508 IGF1RP08069 1367 aa22.81■■□□□ 1.24
IFT140-203ENST00000426508 FHOD3Q2V2M9 1422 aa22.81■■□□□ 1.24
IFT140-203ENST00000426508 RAD54L2Q9Y4B4 1467 aa22.8■■□□□ 1.24
IFT140-203ENST00000426508 GAPVD1Q14C86 1478 aa22.77■■□□□ 1.24
IFT140-203ENST00000426508 HNRNPUQ00839 825 aaKnown RBP eCLIP22.75■■□□□ 1.23
IFT140-203ENST00000426508 JPH4Q96JJ6 628 aa22.74■■□□□ 1.23
IFT140-203ENST00000426508 PLPPR3Q6T4P5 718 aa22.74■■□□□ 1.23
IFT140-203ENST00000426508 NESP48681 1621 aa22.71■■□□□ 1.23
IFT140-203ENST00000426508 EIF4G2P78344 907 aaKnown RBP eCLIP22.68■■□□□ 1.224e-7■■■□□ 18.2
IFT140-203ENST00000426508 SYNJ1O43426 1573 aa22.68■■□□□ 1.22
IFT140-203ENST00000426508 ANP32AP39687 249 aaKnown RBP22.66■■□□□ 1.22
IFT140-203ENST00000426508 UNC13AQ9UPW8 1703 aa22.65■■□□□ 1.22
IFT140-203ENST00000426508 SETD5Q9C0A6 1442 aa22.64■■□□□ 1.21
IFT140-203ENST00000426508 HIRIP3Q9BW71 556 aaPredicted RBP22.63■■□□□ 1.21
IFT140-203ENST00000426508 SIN3AQ96ST3 1273 aa22.63■■□□□ 1.21
IFT140-203ENST00000426508 RGL3Q3MIN7 710 aa22.62■■□□□ 1.21
IFT140-203ENST00000426508 FAM9BQ8IZU0 186 aa22.61■■□□□ 1.21
IFT140-203ENST00000426508 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.211e-6■■■■□ 25.5
IFT140-203ENST00000426508 NEFMP07197 916 aa22.58■■□□□ 1.21
IFT140-203ENST00000426508 TOP2BQ02880 1626 aa22.57■■□□□ 1.2
IFT140-203ENST00000426508 PEG3Q9GZU2 1588 aa22.55■■□□□ 1.2
IFT140-203ENST00000426508 MRC2Q9UBG0 1479 aa22.55■■□□□ 1.2
IFT140-203ENST00000426508 CUX1P39880 1505 aa22.55■■□□□ 1.2
IFT140-203ENST00000426508 CCDC18Q5T9S5 1454 aa22.54■■□□□ 1.2
IFT140-203ENST00000426508 TOPBP1Q92547 1522 aa22.53■■□□□ 1.2
IFT140-203ENST00000426508 EFCAB2Q5VUJ9 269 aa22.53■■□□□ 1.2
IFT140-203ENST00000426508 ARID4BQ4LE39 1312 aaPredicted RBP22.51■■□□□ 1.19
IFT140-203ENST00000426508 KIF21BO75037 1637 aa22.5■■□□□ 1.19
IFT140-203ENST00000426508 CANXP27824 592 aaKnown RBP22.5■■□□□ 1.19
IFT140-203ENST00000426508 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
IFT140-203ENST00000426508 TIMELESSQ9UNS1 1208 aa22.49■■□□□ 1.19
IFT140-203ENST00000426508 PTPRGP23470 1445 aa22.48■■□□□ 1.19
IFT140-203ENST00000426508 RAB3GAP2Q9H2M9 1393 aa22.48■■□□□ 1.19
IFT140-203ENST00000426508 ERICH3Q5RHP9 1530 aa22.48■■□□□ 1.19
IFT140-203ENST00000426508 MRS2Q9HD23 443 aa22.47■■□□□ 1.19
IFT140-203ENST00000426508 POLA1P09884 1462 aaPredicted RBP22.46■■□□□ 1.19
IFT140-203ENST00000426508 PPP1R15AO75807 674 aaPredicted RBP22.46■■□□□ 1.19
IFT140-203ENST00000426508 TMC1Q8TDI8 760 aa22.45■■□□□ 1.19
IFT140-203ENST00000426508 NPM2Q86SE8 214 aaKnown RBP22.45■■□□□ 1.18
IFT140-203ENST00000426508 KANK1Q14678 1352 aa22.45■■□□□ 1.18
IFT140-203ENST00000426508 CARD11Q9BXL7 1154 aa22.44■■□□□ 1.18
IFT140-203ENST00000426508 ANKRD30AQ9BXX3 1397 aa22.44■■□□□ 1.18
IFT140-203ENST00000426508 DNMBPQ6XZF7 1577 aa22.43■■□□□ 1.18
IFT140-203ENST00000426508 IFT140Q96RY7 1462 aa22.43■■□□□ 1.18
IFT140-203ENST00000426508 LAMC3Q9Y6N6 1575 aa22.4■■□□□ 1.18
IFT140-203ENST00000426508 PRXQ9BXM0 1461 aa22.39■■□□□ 1.18
IFT140-203ENST00000426508 RSPH4AQ5TD94 716 aa22.39■■□□□ 1.17
IFT140-203ENST00000426508 SENP3Q9H4L4 574 aaPredicted RBP22.39■■□□□ 1.17
IFT140-203ENST00000426508 OSCARQ8IYS5 282 aa22.38■■□□□ 1.17
IFT140-203ENST00000426508 CCDC136Q96JN2 1154 aa22.38■■□□□ 1.17
IFT140-203ENST00000426508 PKD2Q13563 968 aa22.38■■□□□ 1.17
IFT140-203ENST00000426508 HNRNPMP52272 730 aaKnown RBP eCLIP22.37■■□□□ 1.17
IFT140-203ENST00000426508 DNAJC5BQ9UF47 199 aa22.37■■□□□ 1.17
IFT140-203ENST00000426508 MPHOSPH9Q99550 1183 aa22.36■■□□□ 1.17
IFT140-203ENST00000426508 IRX6P78412 446 aaPredicted RBP22.35■■□□□ 1.17
IFT140-203ENST00000426508 CDCA8Q53HL2 280 aa22.33■■□□□ 1.17
IFT140-203ENST00000426508 SLC24A1O60721 1099 aa22.33■■□□□ 1.17
IFT140-203ENST00000426508 DCAF11Q8TEB1 546 aa22.33■■□□□ 1.17
IFT140-203ENST00000426508 NUP155O75694 1391 aa22.33■■□□□ 1.16
IFT140-203ENST00000426508 TRHP20396 242 aaPredicted RBP22.32■■□□□ 1.16
IFT140-203ENST00000426508 FOXD1Q16676 465 aa22.31■■□□□ 1.16
IFT140-203ENST00000426508 ZBTB47Q9UFB7 747 aaPredicted RBP22.3■■□□□ 1.16
IFT140-203ENST00000426508 GGT6Q6P531 493 aa22.3■■□□□ 1.16
IFT140-203ENST00000426508 WDR43Q15061 677 aaKnown RBP eCLIP22.3■■□□□ 1.16
IFT140-203ENST00000426508 SALL2Q9Y467 1007 aaPredicted RBP22.29■■□□□ 1.16
IFT140-203ENST00000426508 CASKIN1Q8WXD9 1431 aa22.27■■□□□ 1.16
IFT140-203ENST00000426508 SUPT16HQ9Y5B9 1047 aaKnown RBP22.26■■□□□ 1.15
IFT140-203ENST00000426508 SPAG9O60271 1321 aaKnown RBP22.26■■□□□ 1.15
IFT140-203ENST00000426508 ARAP1Q96P48 1450 aa22.26■■□□□ 1.15
IFT140-203ENST00000426508 ABCA10Q8WWZ4 1543 aa22.25■■□□□ 1.15
IFT140-203ENST00000426508 MLECQ14165 292 aa22.24■■□□□ 1.15
IFT140-203ENST00000426508 LRRC9Q6ZRR7 1453 aa22.21■■□□□ 1.15
IFT140-203ENST00000426508 KIF3BO15066 747 aa22.2■■□□□ 1.14
IFT140-203ENST00000426508 SNAPC4Q5SXM2 1469 aa22.19■■□□□ 1.14
IFT140-203ENST00000426508 KNSTRNQ9Y448 316 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms