RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 CTTNBP2Q8WZ74 1663 aa25.25■■□□□ 1.63
SCRN1-205ENST00000425819 CHD1O14646 1710 aa25.25■■□□□ 1.63
SCRN1-205ENST00000425819 CLIP1P30622 1438 aa25.24■■□□□ 1.63
SCRN1-205ENST00000425819 CEP170Q5SW79 1584 aa25.22■■□□□ 1.63
SCRN1-205ENST00000425819 NUP160Q12769 1436 aa25.21■■□□□ 1.63
SCRN1-205ENST00000425819 KIAA0586Q9BVV6 1533 aa25.18■■□□□ 1.62
SCRN1-205ENST00000425819 IQGAP2Q13576 1575 aa25.16■■□□□ 1.62
SCRN1-205ENST00000425819 ARHGAP35Q9NRY4 1499 aa25.1■■□□□ 1.61
SCRN1-205ENST00000425819 P3H3Q8IVL6 736 aa25.06■■□□□ 1.6
SCRN1-205ENST00000425819 UGGT2Q9NYU1 1516 aa25.04■■□□□ 1.6
SCRN1-205ENST00000425819 ARAP1Q96P48 1450 aa25.03■■□□□ 1.6
SCRN1-205ENST00000425819 EFCAB5A4FU69 1503 aa25.03■■□□□ 1.6
SCRN1-205ENST00000425819 JPH4Q96JJ6 628 aa25.02■■□□□ 1.6
SCRN1-205ENST00000425819 SAMD9Q5K651 1589 aa24.99■■□□□ 1.59
SCRN1-205ENST00000425819 OSCARQ8IYS5 282 aa24.98■■□□□ 1.59
SCRN1-205ENST00000425819 FHOD3Q2V2M9 1422 aa24.98■■□□□ 1.59
SCRN1-205ENST00000425819 CLASP1Q7Z460 1538 aa24.98■■□□□ 1.59
SCRN1-205ENST00000425819 DISP1Q96F81 1524 aa24.95■■□□□ 1.58
SCRN1-205ENST00000425819 VPS8Q8N3P4 1428 aa24.93■■□□□ 1.58
SCRN1-205ENST00000425819 KIAA0556O60303 1618 aa24.91■■□□□ 1.58
SCRN1-205ENST00000425819 PRG4Q92954 1404 aaPredicted RBP24.91■■□□□ 1.58
SCRN1-205ENST00000425819 CARMIL2Q6F5E8 1435 aa24.89■■□□□ 1.58
SCRN1-205ENST00000425819 SHROOM2Q13796 1616 aa24.89■■□□□ 1.57
SCRN1-205ENST00000425819 TTBK1Q5TCY1 1321 aaPredicted RBP24.85■■□□□ 1.57
SCRN1-205ENST00000425819 FMN1Q68DA7 1419 aa24.82■■□□□ 1.56
SCRN1-205ENST00000425819 ERCC6L2Q5T890 1561 aa24.79■■□□□ 1.56
SCRN1-205ENST00000425819 PCF11O94913 1555 aaKnown RBP24.75■■□□□ 1.55
SCRN1-205ENST00000425819 ATP1B4Q9UN42 357 aaPredicted RBP24.75■■□□□ 1.55
SCRN1-205ENST00000425819 CASKIN1Q8WXD9 1431 aa24.73■■□□□ 1.55
SCRN1-205ENST00000425819 PTPRGP23470 1445 aa24.71■■□□□ 1.55
SCRN1-205ENST00000425819 APLP2Q06481 763 aa24.7■■□□□ 1.54
SCRN1-205ENST00000425819 FYCO1Q9BQS8 1478 aa24.69■■□□□ 1.54
SCRN1-205ENST00000425819 PPARGC1BQ86YN6 1023 aaKnown RBP24.68■■□□□ 1.54
SCRN1-205ENST00000425819 PLB1Q6P1J6 1458 aa24.65■■□□□ 1.54
SCRN1-205ENST00000425819 RAPGEF6Q8TEU7 1601 aa24.61■■□□□ 1.53
SCRN1-205ENST00000425819 HECW1Q76N89 1606 aa24.6■■□□□ 1.53
SCRN1-205ENST00000425819 ARID3CA6NKF2 412 aa24.59■■□□□ 1.53
SCRN1-205ENST00000425819 ABCA8O94911 1581 aa24.58■■□□□ 1.53
SCRN1-205ENST00000425819 NUP153P49790 1475 aaKnown RBP24.56■■□□□ 1.52
SCRN1-205ENST00000425819 TIAM1Q13009 1591 aa24.56■■□□□ 1.52
SCRN1-205ENST00000425819 ARHGEF11O15085 1522 aa24.55■■□□□ 1.52
SCRN1-205ENST00000425819 UACAQ9BZF9 1416 aa24.55■■□□□ 1.52
SCRN1-205ENST00000425819 KANK4Q5T7N3 995 aaPredicted RBP24.54■■□□□ 1.52
SCRN1-205ENST00000425819 EPRSP07814 1512 aaKnown RBP24.53■■□□□ 1.52
SCRN1-205ENST00000425819 MAP3K1Q13233 1512 aa24.53■■□□□ 1.52
SCRN1-205ENST00000425819 LRRIQ1Q96JM4 1722 aa24.53■■□□□ 1.52
SCRN1-205ENST00000425819 CCDC18Q5T9S5 1454 aa24.51■■□□□ 1.51
SCRN1-205ENST00000425819 CDK13Q14004 1512 aaKnown RBP24.51■■□□□ 1.51
SCRN1-205ENST00000425819 CFAP43Q8NDM7 1665 aa24.51■■□□□ 1.51
SCRN1-205ENST00000425819 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.48■■□□□ 1.51
SCRN1-205ENST00000425819 HNRNPUL2Q1KMD3 747 aaKnown RBP24.48■■□□□ 1.51
SCRN1-205ENST00000425819 ABCC2Q92887 1545 aa24.47■■□□□ 1.51
SCRN1-205ENST00000425819 LRRC9Q6ZRR7 1453 aa24.46■■□□□ 1.51
SCRN1-205ENST00000425819 RIMBP3CA6NJZ7 1639 aa24.45■■□□□ 1.51
SCRN1-205ENST00000425819 RIMBP3BA6NNM3 1639 aa24.45■■□□□ 1.51
SCRN1-205ENST00000425819 RIMBP3Q9UFD9 1639 aa24.45■■□□□ 1.51
SCRN1-205ENST00000425819 UHRF1BP1LA0JNW5 1464 aa24.43■■□□□ 1.5
SCRN1-205ENST00000425819 ATP10BO94823 1461 aa24.43■■□□□ 1.5
SCRN1-205ENST00000425819 MTUS2Q5JR59 1369 aa24.41■■□□□ 1.5
SCRN1-205ENST00000425819 MAGI3Q5TCQ9 1506 aa24.38■■□□□ 1.49
SCRN1-205ENST00000425819 ADCY10Q96PN6 1610 aa24.38■■□□□ 1.49
SCRN1-205ENST00000425819 CDK11AQ9UQ88 783 aaPredicted RBP24.37■■□□□ 1.49
SCRN1-205ENST00000425819 CYB5RLQ6IPT4 315 aa24.36■■□□□ 1.49
SCRN1-205ENST00000425819 EHBP1L1Q8N3D4 1523 aa24.34■■□□□ 1.49
SCRN1-205ENST00000425819 KDM5BQ9UGL1 1544 aa24.32■■□□□ 1.48
SCRN1-205ENST00000425819 PLEKHD1A6NEE1 506 aa24.31■■□□□ 1.48
SCRN1-205ENST00000425819 ZCCHC11Q5TAX3 1644 aaKnown RBP24.3■■□□□ 1.48
SCRN1-205ENST00000425819 TROQ12816 1431 aaPredicted RBP24.29■■□□□ 1.48
SCRN1-205ENST00000425819 TRIM26Q12899 539 aaPredicted RBP24.27■■□□□ 1.48
SCRN1-205ENST00000425819 NCOA2Q15596 1464 aa24.24■■□□□ 1.47
SCRN1-205ENST00000425819 NPM1P06748 294 aaKnown RBP eCLIP24.24■■□□□ 1.47
SCRN1-205ENST00000425819 SUPT6HQ7KZ85 1726 aaKnown RBP24.23■■□□□ 1.47
SCRN1-205ENST00000425819 PHLDB1Q86UU1 1377 aa24.23■■□□□ 1.47
SCRN1-205ENST00000425819 KIF14Q15058 1648 aa24.17■■□□□ 1.46
SCRN1-205ENST00000425819 PCGF6Q9BYE7 350 aa24.16■■□□□ 1.46
SCRN1-205ENST00000425819 KCNH8Q96L42 1107 aa24.16■■□□□ 1.46
SCRN1-205ENST00000425819 ASXL2Q76L83 1435 aa24.14■■□□□ 1.46
SCRN1-205ENST00000425819 WDR7Q9Y4E6 1490 aa24.13■■□□□ 1.45
SCRN1-205ENST00000425819 DNAJC5Q9H3Z4 198 aa24.12■■□□□ 1.45
SCRN1-205ENST00000425819 MYOM3Q5VTT5 1437 aa24.12■■□□□ 1.45
SCRN1-205ENST00000425819 CCNB3Q8WWL7 1395 aa24.12■■□□□ 1.45
SCRN1-205ENST00000425819 RRBP1Q9P2E9 1410 aaKnown RBP24.11■■□□□ 1.45
SCRN1-205ENST00000425819 ABCC10Q5T3U5 1492 aa24.09■■□□□ 1.45
SCRN1-205ENST00000425819 FGD6Q6ZV73 1430 aa24.07■■□□□ 1.44
SCRN1-205ENST00000425819 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.05■■□□□ 1.44
SCRN1-205ENST00000425819 FAM50AQ14320 339 aaKnown RBP24.03■■□□□ 1.44
SCRN1-205ENST00000425819 GPATCH8Q9UKJ3 1502 aaKnown RBP24.03■■□□□ 1.44
SCRN1-205ENST00000425819 TTC37Q6PGP7 1564 aa24.02■■□□□ 1.44
SCRN1-205ENST00000425819 MAPKBP1O60336 1514 aa24.02■■□□□ 1.44
SCRN1-205ENST00000425819 MIA2Q96PC5 1412 aa24■■□□□ 1.43
SCRN1-205ENST00000425819 CFDP1Q9UEE9 299 aaPredicted RBP23.99■■□□□ 1.43
SCRN1-205ENST00000425819 ITSN2Q9NZM3 1697 aa23.98■■□□□ 1.43
SCRN1-205ENST00000425819 PTPN23Q9H3S7 1636 aa23.96■■□□□ 1.43
SCRN1-205ENST00000425819 CDC42BPAQ5VT25 1732 aa23.96■■□□□ 1.43
SCRN1-205ENST00000425819 ZNF777Q9ULD5 760 aaPredicted RBP23.95■■□□□ 1.42
SCRN1-205ENST00000425819 ZNF644Q9H582 1327 aaPredicted RBP23.94■■□□□ 1.42
SCRN1-205ENST00000425819 ITGAEP38570 1179 aa23.94■■□□□ 1.42
SCRN1-205ENST00000425819 TCOF1Q13428 1488 aaKnown RBP23.93■■□□□ 1.42
SCRN1-205ENST00000425819 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.92■■□□□ 1.42
SCRN1-205ENST00000425819 PREX2Q70Z35 1606 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms