RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 CHIC1Q5VXU3 224 aa18.48■□□□□ 0.55
TOP3B-203ENST00000424393 SHROOM2Q13796 1616 aa18.47■□□□□ 0.55
TOP3B-203ENST00000424393 ERCC6L2Q5T890 1561 aa18.42■□□□□ 0.54
TOP3B-203ENST00000424393 RAPGEF2Q9Y4G8 1499 aa18.42■□□□□ 0.54
TOP3B-203ENST00000424393 KIAA0586Q9BVV6 1533 aa18.4■□□□□ 0.54
TOP3B-203ENST00000424393 PRXQ9BXM0 1461 aa18.38■□□□□ 0.53
TOP3B-203ENST00000424393 EEA1Q15075 1411 aa18.36■□□□□ 0.53
TOP3B-203ENST00000424393 JPH4Q96JJ6 628 aa18.35■□□□□ 0.53
TOP3B-203ENST00000424393 PRG4Q92954 1404 aaPredicted RBP18.34■□□□□ 0.53
TOP3B-203ENST00000424393 CSRNP3Q8WYN3 585 aa18.32■□□□□ 0.52
TOP3B-203ENST00000424393 IQGAP2Q13576 1575 aa18.32■□□□□ 0.52
TOP3B-203ENST00000424393 CTTNBP2Q8WZ74 1663 aa18.29■□□□□ 0.52
TOP3B-203ENST00000424393 FAM9AQ8IZU1 332 aaPredicted RBP18.28■□□□□ 0.52
TOP3B-203ENST00000424393 UGGT2Q9NYU1 1516 aa18.22■□□□□ 0.51
TOP3B-203ENST00000424393 KIF21BO75037 1637 aa18.21■□□□□ 0.51
TOP3B-203ENST00000424393 DISP1Q96F81 1524 aa18.19■□□□□ 0.5
TOP3B-203ENST00000424393 CARMIL2Q6F5E8 1435 aa18.17■□□□□ 0.5
TOP3B-203ENST00000424393 KIAA0556O60303 1618 aa18.16■□□□□ 0.5
TOP3B-203ENST00000424393 TNIKQ9UKE5 1360 aa18.13■□□□□ 0.49
TOP3B-203ENST00000424393 PTPRGP23470 1445 aa18.11■□□□□ 0.49
TOP3B-203ENST00000424393 ADCY10Q96PN6 1610 aa18.1■□□□□ 0.49
TOP3B-203ENST00000424393 GOLGA3Q08378 1498 aa18.08■□□□□ 0.49
TOP3B-203ENST00000424393 TTBK1Q5TCY1 1321 aaPredicted RBP18.06■□□□□ 0.48
TOP3B-203ENST00000424393 SAMD9Q5K651 1589 aa18.05■□□□□ 0.48
TOP3B-203ENST00000424393 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
TOP3B-203ENST00000424393 UACAQ9BZF9 1416 aa18■□□□□ 0.47
TOP3B-203ENST00000424393 UHRF1BP1LA0JNW5 1464 aa18■□□□□ 0.47
TOP3B-203ENST00000424393 ABCC2Q92887 1545 aa17.99■□□□□ 0.47
TOP3B-203ENST00000424393 UBTFP17480 764 aaKnown RBP17.98■□□□□ 0.47
TOP3B-203ENST00000424393 P3H3Q8IVL6 736 aa17.97■□□□□ 0.47
TOP3B-203ENST00000424393 RANGAP1P46060 587 aaPredicted RBP17.96■□□□□ 0.47
TOP3B-203ENST00000424393 MAPKBP1O60336 1514 aa17.96■□□□□ 0.47
TOP3B-203ENST00000424393 ABCA8O94911 1581 aa17.96■□□□□ 0.46
TOP3B-203ENST00000424393 PLB1Q6P1J6 1458 aa17.95■□□□□ 0.46
TOP3B-203ENST00000424393 NPM1P06748 294 aaKnown RBP eCLIP17.95■□□□□ 0.46
TOP3B-203ENST00000424393 EFCAB5A4FU69 1503 aa17.94■□□□□ 0.46
TOP3B-203ENST00000424393 KIF13AQ9H1H9 1805 aa17.93■□□□□ 0.46
TOP3B-203ENST00000424393 FHOD3Q2V2M9 1422 aa17.92■□□□□ 0.46
TOP3B-203ENST00000424393 KDM5BQ9UGL1 1544 aa17.92■□□□□ 0.46
TOP3B-203ENST00000424393 ZCCHC11Q5TAX3 1644 aaKnown RBP17.9■□□□□ 0.46
TOP3B-203ENST00000424393 FAM69CQ0P6D2 419 aa17.89■□□□□ 0.45
TOP3B-203ENST00000424393 ARHGAP35Q9NRY4 1499 aa17.88■□□□□ 0.45
TOP3B-203ENST00000424393 ABCC10Q5T3U5 1492 aa17.87■□□□□ 0.45
TOP3B-203ENST00000424393 DIP2BQ9P265 1576 aa17.87■□□□□ 0.45
TOP3B-203ENST00000424393 RAPGEF6Q8TEU7 1601 aa17.87■□□□□ 0.45
TOP3B-203ENST00000424393 ASXL2Q76L83 1435 aa17.85■□□□□ 0.45
TOP3B-203ENST00000424393 ATP10BO94823 1461 aa17.79■□□□□ 0.44
TOP3B-203ENST00000424393 NUP153P49790 1475 aaKnown RBP17.79■□□□□ 0.44
TOP3B-203ENST00000424393 TSPOAP1O95153 1857 aa17.78■□□□□ 0.44
TOP3B-203ENST00000424393 WDR7Q9Y4E6 1490 aa17.76■□□□□ 0.43
TOP3B-203ENST00000424393 GLI2P10070 1586 aa17.76■□□□□ 0.43
TOP3B-203ENST00000424393 ARID3CA6NKF2 412 aa17.76■□□□□ 0.43
TOP3B-203ENST00000424393 KDM6BO15054 1643 aa17.76■□□□□ 0.43
TOP3B-203ENST00000424393 FMN1Q68DA7 1419 aa17.75■□□□□ 0.43
TOP3B-203ENST00000424393 EPRSP07814 1512 aaKnown RBP17.75■□□□□ 0.43
TOP3B-203ENST00000424393 CLIP1P30622 1438 aa17.74■□□□□ 0.43
TOP3B-203ENST00000424393 LOC105371045A0A1W2PR82 267 aa17.71■□□□□ 0.43
TOP3B-203ENST00000424393 HECW1Q76N89 1606 aa17.7■□□□□ 0.42
TOP3B-203ENST00000424393 MAP3K4Q9Y6R4 1608 aa17.7■□□□□ 0.42
TOP3B-203ENST00000424393 PPRC1Q5VV67 1664 aaKnown RBP17.69■□□□□ 0.42
TOP3B-203ENST00000424393 CEP162Q5TB80 1403 aa17.68■□□□□ 0.42
TOP3B-203ENST00000424393 CDK13Q14004 1512 aaKnown RBP17.67■□□□□ 0.42
TOP3B-203ENST00000424393 LRRIQ1Q96JM4 1722 aa17.67■□□□□ 0.42
TOP3B-203ENST00000424393 PCF11O94913 1555 aaKnown RBP17.67■□□□□ 0.42
TOP3B-203ENST00000424393 KDM4FA0A1W2PPD8 638 aa17.67■□□□□ 0.42
TOP3B-203ENST00000424393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.65■□□□□ 0.42
TOP3B-203ENST00000424393 HNRNPUL2Q1KMD3 747 aaKnown RBP17.65■□□□□ 0.42
TOP3B-203ENST00000424393 KCNH8Q96L42 1107 aa17.65■□□□□ 0.42
TOP3B-203ENST00000424393 CFAP43Q8NDM7 1665 aa17.64■□□□□ 0.42
TOP3B-203ENST00000424393 CASKIN1Q8WXD9 1431 aa17.64■□□□□ 0.41
TOP3B-203ENST00000424393 ATP1B4Q9UN42 357 aaPredicted RBP17.62■□□□□ 0.41
TOP3B-203ENST00000424393 ABCA9Q8IUA7 1624 aa17.61■□□□□ 0.41
TOP3B-203ENST00000424393 FYCO1Q9BQS8 1478 aa17.6■□□□□ 0.41
TOP3B-203ENST00000424393 ILDR1Q86SU0 546 aaPredicted RBP17.59■□□□□ 0.41
TOP3B-203ENST00000424393 CD109Q6YHK3 1445 aa17.58■□□□□ 0.41
TOP3B-203ENST00000424393 PLEKHD1A6NEE1 506 aa17.58■□□□□ 0.4
TOP3B-203ENST00000424393 MAGI3Q5TCQ9 1506 aa17.57■□□□□ 0.4
TOP3B-203ENST00000424393 CCDC18Q5T9S5 1454 aa17.56■□□□□ 0.4
TOP3B-203ENST00000424393 TEX14Q8IWB6 1497 aa17.56■□□□□ 0.4
TOP3B-203ENST00000424393 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.53■□□□□ 0.4
TOP3B-203ENST00000424393 TTC37Q6PGP7 1564 aa17.53■□□□□ 0.4
TOP3B-203ENST00000424393 TROQ12816 1431 aaPredicted RBP17.51■□□□□ 0.39
TOP3B-203ENST00000424393 KIF14Q15058 1648 aa17.5■□□□□ 0.39
TOP3B-203ENST00000424393 CDK11AQ9UQ88 783 aaPredicted RBP17.5■□□□□ 0.39
TOP3B-203ENST00000424393 COL17A1Q9UMD9 1497 aaPredicted RBP17.5■□□□□ 0.39
TOP3B-203ENST00000424393 ADGRL1O94910 1474 aa17.49■□□□□ 0.39
TOP3B-203ENST00000424393 VPS8Q8N3P4 1428 aa17.47■□□□□ 0.39
TOP3B-203ENST00000424393 MYO5CQ9NQX4 1742 aa17.43■□□□□ 0.38
TOP3B-203ENST00000424393 NEO1Q92859 1461 aa17.43■□□□□ 0.38
TOP3B-203ENST00000424393 ARAP3Q8WWN8 1544 aa17.42■□□□□ 0.38
TOP3B-203ENST00000424393 PLCH2O75038 1416 aa17.4■□□□□ 0.38
TOP3B-203ENST00000424393 CFAP74Q9C0B2 1584 aa17.4■□□□□ 0.38
TOP3B-203ENST00000424393 PHLDB1Q86UU1 1377 aa17.4■□□□□ 0.38
TOP3B-203ENST00000424393 FANCAO15360 1455 aa17.39■□□□□ 0.37
TOP3B-203ENST00000424393 TIAM1Q13009 1591 aa17.39■□□□□ 0.37
TOP3B-203ENST00000424393 CDC42BPBQ9Y5S2 1711 aa17.37■□□□□ 0.37
TOP3B-203ENST00000424393 AKNAQ7Z591 1439 aa17.37■□□□□ 0.37
TOP3B-203ENST00000424393 EHBP1L1Q8N3D4 1523 aa17.37■□□□□ 0.37
TOP3B-203ENST00000424393 HECW2Q9P2P5 1572 aa17.36■□□□□ 0.37
TOP3B-203ENST00000424393 PREX2Q70Z35 1606 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms