RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 TTBK1Q5TCY1 1321 aaPredicted RBP25.36■■□□□ 1.65
CMTM3-202ENST00000424011 PBRM1Q86U86 1689 aa25.34■■□□□ 1.65
CMTM3-202ENST00000424011 ZEB1P37275 1124 aaPredicted RBP25.32■■□□□ 1.64
CMTM3-202ENST00000424011 EIF4G3O43432 1585 aaKnown RBP25.3■■□□□ 1.64
CMTM3-202ENST00000424011 FHAD1B1AJZ9 1412 aa25.29■■□□□ 1.64
CMTM3-202ENST00000424011 ADAMTS12P58397 1594 aa25.23■■□□□ 1.63
CMTM3-202ENST00000424011 SNAPC4Q5SXM2 1469 aa25.2■■□□□ 1.62
CMTM3-202ENST00000424011 MYT1Q01538 1121 aa25.18■■□□□ 1.62
CMTM3-202ENST00000424011 EFCAB5A4FU69 1503 aa25.18■■□□□ 1.62
CMTM3-202ENST00000424011 CTTNBP2Q8WZ74 1663 aa25.18■■□□□ 1.62
CMTM3-202ENST00000424011 MAGI1Q96QZ7 1491 aaPredicted RBP25.16■■□□□ 1.62
CMTM3-202ENST00000424011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.11■■□□□ 1.61
CMTM3-202ENST00000424011 MAP3K1Q13233 1512 aa25.09■■□□□ 1.61
CMTM3-202ENST00000424011 SYNJ2O15056 1496 aa25.08■■□□□ 1.6
CMTM3-202ENST00000424011 GRIN2AQ12879 1464 aa25.06■■□□□ 1.6
CMTM3-202ENST00000424011 CHMP7Q8WUX9 453 aaPredicted RBP25.06■■□□□ 1.6
CMTM3-202ENST00000424011 KANK4Q5T7N3 995 aaPredicted RBP25.03■■□□□ 1.6
CMTM3-202ENST00000424011 CCER1Q8TC90 406 aaPredicted RBP25.01■■□□□ 1.59
CMTM3-202ENST00000424011 FHOD3Q2V2M9 1422 aa25■■□□□ 1.59
CMTM3-202ENST00000424011 P3H3Q8IVL6 736 aa25■■□□□ 1.59
CMTM3-202ENST00000424011 FMN1Q68DA7 1419 aa24.99■■□□□ 1.59
CMTM3-202ENST00000424011 FBLN2P98095 1184 aa24.99■■□□□ 1.59
CMTM3-202ENST00000424011 TIAM1Q13009 1591 aa24.98■■□□□ 1.59
CMTM3-202ENST00000424011 FYCO1Q9BQS8 1478 aa24.97■■□□□ 1.59
CMTM3-202ENST00000424011 SAMD9Q5K651 1589 aa24.97■■□□□ 1.59
CMTM3-202ENST00000424011 SCAF1Q9H7N4 1312 aaKnown RBP24.97■■□□□ 1.59
CMTM3-202ENST00000424011 CASKIN1Q8WXD9 1431 aa24.95■■□□□ 1.58
CMTM3-202ENST00000424011 KIAA0586Q9BVV6 1533 aa24.95■■□□□ 1.58
CMTM3-202ENST00000424011 IQGAP2Q13576 1575 aa24.94■■□□□ 1.58
CMTM3-202ENST00000424011 PCF11O94913 1555 aaKnown RBP24.94■■□□□ 1.58
CMTM3-202ENST00000424011 NUP160Q12769 1436 aa24.9■■□□□ 1.58
CMTM3-202ENST00000424011 LRRC9Q6ZRR7 1453 aa24.89■■□□□ 1.57
CMTM3-202ENST00000424011 CEP170Q5SW79 1584 aa24.88■■□□□ 1.57
CMTM3-202ENST00000424011 RRBP1Q9P2E9 1410 aaKnown RBP24.88■■□□□ 1.57
CMTM3-202ENST00000424011 CFAP43Q8NDM7 1665 aa24.87■■□□□ 1.57
CMTM3-202ENST00000424011 HNRNPUL2Q1KMD3 747 aaKnown RBP24.86■■□□□ 1.57
CMTM3-202ENST00000424011 UGGT2Q9NYU1 1516 aa24.85■■□□□ 1.57
CMTM3-202ENST00000424011 ATP1B4Q9UN42 357 aaPredicted RBP24.84■■□□□ 1.57
CMTM3-202ENST00000424011 CCNB3Q8WWL7 1395 aa24.8■■□□□ 1.56
CMTM3-202ENST00000424011 CHD1O14646 1710 aa24.75■■□□□ 1.55
CMTM3-202ENST00000424011 JPH4Q96JJ6 628 aa24.75■■□□□ 1.55
CMTM3-202ENST00000424011 DISP1Q96F81 1524 aa24.74■■□□□ 1.55
CMTM3-202ENST00000424011 KIAA0556O60303 1618 aa24.69■■□□□ 1.54
CMTM3-202ENST00000424011 CCDC18Q5T9S5 1454 aa24.67■■□□□ 1.54
CMTM3-202ENST00000424011 PHLDB1Q86UU1 1377 aa24.66■■□□□ 1.54
CMTM3-202ENST00000424011 MTUS2Q5JR59 1369 aa24.65■■□□□ 1.54
CMTM3-202ENST00000424011 HECW1Q76N89 1606 aa24.64■■□□□ 1.53
CMTM3-202ENST00000424011 CARMIL2Q6F5E8 1435 aa24.64■■□□□ 1.53
CMTM3-202ENST00000424011 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.58■■□□□ 1.53
CMTM3-202ENST00000424011 EHBP1L1Q8N3D4 1523 aa24.57■■□□□ 1.52
CMTM3-202ENST00000424011 LRRIQ1Q96JM4 1722 aa24.56■■□□□ 1.52
CMTM3-202ENST00000424011 PRG4Q92954 1404 aaPredicted RBP24.56■■□□□ 1.52
CMTM3-202ENST00000424011 EPRSP07814 1512 aaKnown RBP24.53■■□□□ 1.52
CMTM3-202ENST00000424011 SHROOM2Q13796 1616 aa24.52■■□□□ 1.52
CMTM3-202ENST00000424011 CLASP1Q7Z460 1538 aa24.52■■□□□ 1.52
CMTM3-202ENST00000424011 FAM50AQ14320 339 aaKnown RBP24.51■■□□□ 1.51
CMTM3-202ENST00000424011 CLSPNQ9HAW4 1339 aa24.51■■□□□ 1.51
CMTM3-202ENST00000424011 SUPT6HQ7KZ85 1726 aaKnown RBP24.5■■□□□ 1.51
CMTM3-202ENST00000424011 ITGAEP38570 1179 aa24.5■■□□□ 1.51
CMTM3-202ENST00000424011 NCOA2Q15596 1464 aa24.49■■□□□ 1.51
CMTM3-202ENST00000424011 FGD6Q6ZV73 1430 aa24.48■■□□□ 1.51
CMTM3-202ENST00000424011 MYOM3Q5VTT5 1437 aa24.45■■□□□ 1.5
CMTM3-202ENST00000424011 RAPGEF6Q8TEU7 1601 aa24.43■■□□□ 1.5
CMTM3-202ENST00000424011 ARHGEF11O15085 1522 aa24.43■■□□□ 1.5
CMTM3-202ENST00000424011 PLB1Q6P1J6 1458 aa24.43■■□□□ 1.5
CMTM3-202ENST00000424011 MAGI3Q5TCQ9 1506 aa24.42■■□□□ 1.5
CMTM3-202ENST00000424011 DHX57Q6P158 1386 aaKnown RBP24.42■■□□□ 1.5
CMTM3-202ENST00000424011 NUP153P49790 1475 aaKnown RBP24.42■■□□□ 1.5
CMTM3-202ENST00000424011 PTPRGP23470 1445 aa24.41■■□□□ 1.5
CMTM3-202ENST00000424011 CDK13Q14004 1512 aaKnown RBP24.41■■□□□ 1.5
CMTM3-202ENST00000424011 OSCARQ8IYS5 282 aa24.4■■□□□ 1.5
CMTM3-202ENST00000424011 SETD5Q9C0A6 1442 aa24.4■■□□□ 1.5
CMTM3-202ENST00000424011 CDK11AQ9UQ88 783 aaPredicted RBP24.39■■□□□ 1.49
CMTM3-202ENST00000424011 RAB3GAP2Q9H2M9 1393 aa24.37■■□□□ 1.49
CMTM3-202ENST00000424011 ERCC6L2Q5T890 1561 aa24.37■■□□□ 1.49
CMTM3-202ENST00000424011 ARID3CA6NKF2 412 aa24.36■■□□□ 1.49
CMTM3-202ENST00000424011 ABCA8O94911 1581 aa24.35■■□□□ 1.49
CMTM3-202ENST00000424011 MIA2Q96PC5 1412 aa24.31■■□□□ 1.48
CMTM3-202ENST00000424011 PTPN23Q9H3S7 1636 aa24.29■■□□□ 1.48
CMTM3-202ENST00000424011 TCOF1Q13428 1488 aaKnown RBP24.28■■□□□ 1.48
CMTM3-202ENST00000424011 ACIN1Q9UKV3 1341 aaKnown RBP24.28■■□□□ 1.48
CMTM3-202ENST00000424011 UACAQ9BZF9 1416 aa24.26■■□□□ 1.47
CMTM3-202ENST00000424011 ZNF316A6NFI3 1004 aaPredicted RBP24.24■■□□□ 1.47
CMTM3-202ENST00000424011 DIEXFQ68CQ4 756 aaKnown RBP24.24■■□□□ 1.47
CMTM3-202ENST00000424011 ATP10BO94823 1461 aa24.23■■□□□ 1.47
CMTM3-202ENST00000424011 TROQ12816 1431 aaPredicted RBP24.23■■□□□ 1.47
CMTM3-202ENST00000424011 HFM1A2PYH4 1435 aa24.2■■□□□ 1.47
CMTM3-202ENST00000424011 PTPRKQ15262 1439 aa24.17■■□□□ 1.46
CMTM3-202ENST00000424011 ABCC2Q92887 1545 aa24.16■■□□□ 1.46
CMTM3-202ENST00000424011 PLEKHD1A6NEE1 506 aa24.15■■□□□ 1.46
CMTM3-202ENST00000424011 ADCY10Q96PN6 1610 aa24.13■■□□□ 1.45
CMTM3-202ENST00000424011 NEUROD1Q13562 356 aa24.12■■□□□ 1.45
CMTM3-202ENST00000424011 UHRF1BP1LA0JNW5 1464 aa24.12■■□□□ 1.45
CMTM3-202ENST00000424011 AKNAQ7Z591 1439 aa24.11■■□□□ 1.45
CMTM3-202ENST00000424011 MAPKBP1O60336 1514 aa24.1■■□□□ 1.45
CMTM3-202ENST00000424011 NAIPQ13075 1403 aa24.1■■□□□ 1.45
CMTM3-202ENST00000424011 ITSN2Q9NZM3 1697 aa24.06■■□□□ 1.44
CMTM3-202ENST00000424011 CFDP1Q9UEE9 299 aaPredicted RBP24.04■■□□□ 1.44
CMTM3-202ENST00000424011 GTF3C3Q9Y5Q9 886 aa24.04■■□□□ 1.44
CMTM3-202ENST00000424011 KDM5BQ9UGL1 1544 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms