RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 SHROOM2Q13796 1616 aa30.96■■■□□ 2.55
HDAC6-205ENST00000423941 CSRNP3Q8WYN3 585 aa30.95■■■□□ 2.55
HDAC6-205ENST00000423941 KIAA0586Q9BVV6 1533 aa30.93■■■□□ 2.54
HDAC6-205ENST00000423941 JPH4Q96JJ6 628 aa30.85■■■□□ 2.53
HDAC6-205ENST00000423941 ARAP1Q96P48 1450 aa30.8■■■□□ 2.52
HDAC6-205ENST00000423941 ERCC6L2Q5T890 1561 aa30.79■■■□□ 2.52
HDAC6-205ENST00000423941 PRG4Q92954 1404 aaPredicted RBP30.74■■■□□ 2.51
HDAC6-205ENST00000423941 FAM9AQ8IZU1 332 aaPredicted RBP30.74■■■□□ 2.51
HDAC6-205ENST00000423941 IQGAP2Q13576 1575 aa30.74■■■□□ 2.51
HDAC6-205ENST00000423941 CTTNBP2Q8WZ74 1663 aa30.7■■■□□ 2.5
HDAC6-205ENST00000423941 KIF21BO75037 1637 aa30.69■■■□□ 2.5
HDAC6-205ENST00000423941 CYB5RLQ6IPT4 315 aa30.68■■■□□ 2.5
HDAC6-205ENST00000423941 UGGT2Q9NYU1 1516 aa30.63■■■□□ 2.49
HDAC6-205ENST00000423941 DISP1Q96F81 1524 aa30.56■■■□□ 2.48
HDAC6-205ENST00000423941 CARMIL2Q6F5E8 1435 aa30.53■■■□□ 2.48
HDAC6-205ENST00000423941 GOLGA3Q08378 1498 aa30.46■■■□□ 2.47
HDAC6-205ENST00000423941 KIAA0556O60303 1618 aa30.44■■■□□ 2.46
HDAC6-205ENST00000423941 TNIKQ9UKE5 1360 aa30.44■■■□□ 2.46
HDAC6-205ENST00000423941 PTPRGP23470 1445 aa30.39■■■□□ 2.46
HDAC6-205ENST00000423941 SAMD9Q5K651 1589 aa30.34■■■□□ 2.45
HDAC6-205ENST00000423941 UBTFP17480 764 aaKnown RBP30.31■■■□□ 2.44
HDAC6-205ENST00000423941 ADCY10Q96PN6 1610 aa30.29■■■□□ 2.44
HDAC6-205ENST00000423941 EHMT2Q96KQ7 1210 aa30.24■■■□□ 2.43
HDAC6-205ENST00000423941 UHRF1BP1LA0JNW5 1464 aa30.24■■■□□ 2.43
HDAC6-205ENST00000423941 UACAQ9BZF9 1416 aa30.22■■■□□ 2.43
HDAC6-205ENST00000423941 EFCAB5A4FU69 1503 aa30.21■■■□□ 2.43
HDAC6-205ENST00000423941 TTBK1Q5TCY1 1321 aaPredicted RBP30.17■■■□□ 2.42
HDAC6-205ENST00000423941 ABCC2Q92887 1545 aa30.17■■■□□ 2.42
HDAC6-205ENST00000423941 P3H3Q8IVL6 736 aa30.16■■■□□ 2.42
HDAC6-205ENST00000423941 ABCA8O94911 1581 aa30.15■■■□□ 2.42
HDAC6-205ENST00000423941 PLB1Q6P1J6 1458 aa30.12■■■□□ 2.41
HDAC6-205ENST00000423941 RANGAP1P46060 587 aaPredicted RBP30.1■■■□□ 2.41
HDAC6-205ENST00000423941 ARHGAP35Q9NRY4 1499 aa30.1■■■□□ 2.41
HDAC6-205ENST00000423941 KDM5BQ9UGL1 1544 aa30.09■■■□□ 2.41
HDAC6-205ENST00000423941 MAPKBP1O60336 1514 aa30.08■■■□□ 2.41
HDAC6-205ENST00000423941 FHOD3Q2V2M9 1422 aa30.08■■■□□ 2.41
HDAC6-205ENST00000423941 NPM1P06748 294 aaKnown RBP eCLIP30.08■■■□□ 2.41
HDAC6-205ENST00000423941 ZCCHC11Q5TAX3 1644 aaKnown RBP29.98■■■□□ 2.39
HDAC6-205ENST00000423941 RAPGEF6Q8TEU7 1601 aa29.98■■■□□ 2.39
HDAC6-205ENST00000423941 LOC105371045A0A1W2PR82 267 aa29.97■■■□□ 2.39
HDAC6-205ENST00000423941 TRHP20396 242 aaPredicted RBP29.93■■■□□ 2.38
HDAC6-205ENST00000423941 CLIP1P30622 1438 aa29.91■■■□□ 2.38
HDAC6-205ENST00000423941 ABCC10Q5T3U5 1492 aa29.91■■■□□ 2.38
HDAC6-205ENST00000423941 KIF13AQ9H1H9 1805 aa29.91■■■□□ 2.38
HDAC6-205ENST00000423941 FMN1Q68DA7 1419 aa29.9■■■□□ 2.38
HDAC6-205ENST00000423941 ASXL2Q76L83 1435 aa29.9■■■□□ 2.38
HDAC6-205ENST00000423941 ATP10BO94823 1461 aa29.9■■■□□ 2.38
HDAC6-205ENST00000423941 NUP153P49790 1475 aaKnown RBP29.89■■■□□ 2.38
HDAC6-205ENST00000423941 DIP2BQ9P265 1576 aa29.86■■■□□ 2.37
HDAC6-205ENST00000423941 CEP162Q5TB80 1403 aa29.82■■■□□ 2.36
HDAC6-205ENST00000423941 WDR7Q9Y4E6 1490 aa29.78■■■□□ 2.36
HDAC6-205ENST00000423941 GLI2P10070 1586 aa29.77■■■□□ 2.36
HDAC6-205ENST00000423941 FAM69CQ0P6D2 419 aa29.76■■■□□ 2.35
HDAC6-205ENST00000423941 EPRSP07814 1512 aaKnown RBP29.75■■■□□ 2.35
HDAC6-205ENST00000423941 HECW1Q76N89 1606 aa29.73■■■□□ 2.35
HDAC6-205ENST00000423941 CASKIN1Q8WXD9 1431 aa29.71■■■□□ 2.35
HDAC6-205ENST00000423941 ARID3CA6NKF2 412 aa29.71■■■□□ 2.35
HDAC6-205ENST00000423941 LRRIQ1Q96JM4 1722 aa29.68■■■□□ 2.34
HDAC6-205ENST00000423941 PCF11O94913 1555 aaKnown RBP29.67■■■□□ 2.34
HDAC6-205ENST00000423941 CDK13Q14004 1512 aaKnown RBP29.65■■■□□ 2.34
HDAC6-205ENST00000423941 FYCO1Q9BQS8 1478 aa29.64■■■□□ 2.34
HDAC6-205ENST00000423941 MAP3K4Q9Y6R4 1608 aa29.63■■■□□ 2.33
HDAC6-205ENST00000423941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.6■■■□□ 2.33
HDAC6-205ENST00000423941 HNRNPUL2Q1KMD3 747 aaKnown RBP29.6■■■□□ 2.33
HDAC6-205ENST00000423941 PLEKHD1A6NEE1 506 aa29.59■■■□□ 2.33
HDAC6-205ENST00000423941 PPRC1Q5VV67 1664 aaKnown RBP29.57■■■□□ 2.32
HDAC6-205ENST00000423941 KCNH8Q96L42 1107 aa29.57■■■□□ 2.32
HDAC6-205ENST00000423941 ATP1B4Q9UN42 357 aaPredicted RBP29.57■■■□□ 2.32
HDAC6-205ENST00000423941 CFAP43Q8NDM7 1665 aa29.56■■■□□ 2.32
HDAC6-205ENST00000423941 CCDC18Q5T9S5 1454 aa29.55■■■□□ 2.32
HDAC6-205ENST00000423941 TSPOAP1O95153 1857 aa29.55■■■□□ 2.32
HDAC6-205ENST00000423941 ABCA9Q8IUA7 1624 aa29.54■■■□□ 2.32
HDAC6-205ENST00000423941 CDK11AQ9UQ88 783 aaPredicted RBP29.49■■■□□ 2.31
HDAC6-205ENST00000423941 CD109Q6YHK3 1445 aa29.48■■■□□ 2.31
HDAC6-205ENST00000423941 VPS8Q8N3P4 1428 aa29.48■■■□□ 2.31
HDAC6-205ENST00000423941 MAGI3Q5TCQ9 1506 aa29.47■■■□□ 2.31
HDAC6-205ENST00000423941 TROQ12816 1431 aaPredicted RBP29.45■■■□□ 2.31
HDAC6-205ENST00000423941 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.43■■■□□ 2.3
HDAC6-205ENST00000423941 TEX14Q8IWB6 1497 aa29.41■■■□□ 2.3
HDAC6-205ENST00000423941 TTC37Q6PGP7 1564 aa29.35■■■□□ 2.29
HDAC6-205ENST00000423941 KIF14Q15058 1648 aa29.35■■■□□ 2.29
HDAC6-205ENST00000423941 MAP3K1Q13233 1512 aa29.3■■■□□ 2.28
HDAC6-205ENST00000423941 KDM6BO15054 1643 aa29.28■■■□□ 2.28
HDAC6-205ENST00000423941 COL17A1Q9UMD9 1497 aaPredicted RBP29.28■■■□□ 2.28
HDAC6-205ENST00000423941 PHLDB1Q86UU1 1377 aa29.27■■■□□ 2.28
HDAC6-205ENST00000423941 TIAM1Q13009 1591 aa29.27■■■□□ 2.28
HDAC6-205ENST00000423941 PLCH2O75038 1416 aa29.27■■■□□ 2.28
HDAC6-205ENST00000423941 NEO1Q92859 1461 aa29.26■■■□□ 2.27
HDAC6-205ENST00000423941 ARAP3Q8WWN8 1544 aa29.25■■■□□ 2.27
HDAC6-205ENST00000423941 MYO5CQ9NQX4 1742 aa29.23■■■□□ 2.27
HDAC6-205ENST00000423941 MTUS2Q5JR59 1369 aa29.22■■■□□ 2.27
HDAC6-205ENST00000423941 EHBP1L1Q8N3D4 1523 aa29.2■■■□□ 2.27
HDAC6-205ENST00000423941 FANCAO15360 1455 aa29.18■■■□□ 2.26
HDAC6-205ENST00000423941 CFAP74Q9C0B2 1584 aa29.18■■■□□ 2.26
HDAC6-205ENST00000423941 CDC42BPBQ9Y5S2 1711 aa29.17■■■□□ 2.26
HDAC6-205ENST00000423941 CDC42BPAQ5VT25 1732 aa29.16■■■□□ 2.26
HDAC6-205ENST00000423941 LRRC9Q6ZRR7 1453 aa29.15■■■□□ 2.26
HDAC6-205ENST00000423941 PREX2Q70Z35 1606 aa29.14■■■□□ 2.26
HDAC6-205ENST00000423941 AKNAQ7Z591 1439 aa29.13■■■□□ 2.25
HDAC6-205ENST00000423941 GPATCH8Q9UKJ3 1502 aaKnown RBP29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms