RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 RIMBP3BA6NNM3 1639 aa36.1■■■■□ 3.37
SEC22C-207ENST00000423701 RIMBP3Q9UFD9 1639 aa36.1■■■■□ 3.37
SEC22C-207ENST00000423701 KIAA0586Q9BVV6 1533 aa36.05■■■■□ 3.36
SEC22C-207ENST00000423701 SHROOM2Q13796 1616 aa36.05■■■■□ 3.36
SEC22C-207ENST00000423701 KIF21BO75037 1637 aa35.94■■■■□ 3.34
SEC22C-207ENST00000423701 IQGAP2Q13576 1575 aa35.93■■■■□ 3.34
SEC22C-207ENST00000423701 JPH4Q96JJ6 628 aa35.91■■■■□ 3.34
SEC22C-207ENST00000423701 CTTNBP2Q8WZ74 1663 aa35.91■■■■□ 3.34
SEC22C-207ENST00000423701 ERCC6L2Q5T890 1561 aa35.9■■■■□ 3.34
SEC22C-207ENST00000423701 ARAP1Q96P48 1450 aa35.85■■■■□ 3.33
SEC22C-207ENST00000423701 PRG4Q92954 1404 aaPredicted RBP35.85■■■■□ 3.33
SEC22C-207ENST00000423701 UGGT2Q9NYU1 1516 aa35.73■■■■□ 3.31
SEC22C-207ENST00000423701 GOLGA3Q08378 1498 aa35.72■■■■□ 3.31
SEC22C-207ENST00000423701 CYB5RLQ6IPT4 315 aa35.7■■■■□ 3.31
SEC22C-207ENST00000423701 EHMT2Q96KQ7 1210 aa35.65■■■■□ 3.3
SEC22C-207ENST00000423701 DISP1Q96F81 1524 aa35.64■■■■□ 3.3
SEC22C-207ENST00000423701 CARMIL2Q6F5E8 1435 aa35.63■■■■□ 3.29
SEC22C-207ENST00000423701 KIAA0556O60303 1618 aa35.59■■■■□ 3.29
SEC22C-207ENST00000423701 UBTFP17480 764 aaKnown RBP35.54■■■■□ 3.28
SEC22C-207ENST00000423701 TNIKQ9UKE5 1360 aa35.5■■■■□ 3.27
SEC22C-207ENST00000423701 SAMD9Q5K651 1589 aa35.46■■■■□ 3.27
SEC22C-207ENST00000423701 PTPRGP23470 1445 aa35.45■■■■□ 3.26
SEC22C-207ENST00000423701 RANGAP1P46060 587 aaPredicted RBP35.39■■■■□ 3.26
SEC22C-207ENST00000423701 TTBK1Q5TCY1 1321 aaPredicted RBP35.38■■■■□ 3.25
SEC22C-207ENST00000423701 EFCAB5A4FU69 1503 aa35.34■■■■□ 3.25
SEC22C-207ENST00000423701 ADCY10Q96PN6 1610 aa35.32■■■■□ 3.25
SEC22C-207ENST00000423701 P3H3Q8IVL6 736 aa35.31■■■■□ 3.24
SEC22C-207ENST00000423701 FHOD3Q2V2M9 1422 aa35.24■■■■□ 3.23
SEC22C-207ENST00000423701 UACAQ9BZF9 1416 aa35.24■■■■□ 3.23
SEC22C-207ENST00000423701 ARHGAP35Q9NRY4 1499 aa35.21■■■■□ 3.23
SEC22C-207ENST00000423701 ABCC2Q92887 1545 aa35.2■■■■□ 3.23
SEC22C-207ENST00000423701 UHRF1BP1LA0JNW5 1464 aa35.2■■■■□ 3.23
SEC22C-207ENST00000423701 PLB1Q6P1J6 1458 aa35.19■■■■□ 3.22
SEC22C-207ENST00000423701 ABCA8O94911 1581 aa35.17■■■■□ 3.22
SEC22C-207ENST00000423701 LOC105371045A0A1W2PR82 267 aa35.16■■■■□ 3.22
SEC22C-207ENST00000423701 CLIP1P30622 1438 aa35.07■■■■□ 3.21
SEC22C-207ENST00000423701 NPM1P06748 294 aaKnown RBP eCLIP35.06■■■■□ 3.2
SEC22C-207ENST00000423701 RAPGEF6Q8TEU7 1601 aa35.05■■■■□ 3.2
SEC22C-207ENST00000423701 KDM5BQ9UGL1 1544 aa35.04■■■■□ 3.2
SEC22C-207ENST00000423701 MAPKBP1O60336 1514 aa35.02■■■■□ 3.2
SEC22C-207ENST00000423701 CEP162Q5TB80 1403 aa35.01■■■■□ 3.2
SEC22C-207ENST00000423701 ZCCHC11Q5TAX3 1644 aaKnown RBP35■■■■□ 3.19
SEC22C-207ENST00000423701 FMN1Q68DA7 1419 aa34.98■■■■□ 3.19
SEC22C-207ENST00000423701 NUP153P49790 1475 aaKnown RBP34.92■■■■□ 3.18
SEC22C-207ENST00000423701 ASXL2Q76L83 1435 aa34.87■■■■□ 3.17
SEC22C-207ENST00000423701 TRHP20396 242 aaPredicted RBP34.86■■■■□ 3.17
SEC22C-207ENST00000423701 ATP10BO94823 1461 aa34.86■■■■□ 3.17
SEC22C-207ENST00000423701 ARID3CA6NKF2 412 aa34.84■■■■□ 3.17
SEC22C-207ENST00000423701 HECW1Q76N89 1606 aa34.82■■■■□ 3.16
SEC22C-207ENST00000423701 PCF11O94913 1555 aaKnown RBP34.81■■■■□ 3.16
SEC22C-207ENST00000423701 ABCC10Q5T3U5 1492 aa34.8■■■■□ 3.16
SEC22C-207ENST00000423701 DIP2BQ9P265 1576 aa34.79■■■■□ 3.16
SEC22C-207ENST00000423701 KIF13AQ9H1H9 1805 aa34.78■■■■□ 3.16
SEC22C-207ENST00000423701 WDR7Q9Y4E6 1490 aa34.74■■■■□ 3.15
SEC22C-207ENST00000423701 CASKIN1Q8WXD9 1431 aa34.74■■■■□ 3.15
SEC22C-207ENST00000423701 CDK13Q14004 1512 aaKnown RBP34.71■■■■□ 3.15
SEC22C-207ENST00000423701 FYCO1Q9BQS8 1478 aa34.71■■■■□ 3.15
SEC22C-207ENST00000423701 EPRSP07814 1512 aaKnown RBP34.7■■■■□ 3.15
SEC22C-207ENST00000423701 ATP1B4Q9UN42 357 aaPredicted RBP34.7■■■■□ 3.15
SEC22C-207ENST00000423701 LRRIQ1Q96JM4 1722 aa34.69■■■■□ 3.14
SEC22C-207ENST00000423701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.68■■■■□ 3.14
SEC22C-207ENST00000423701 HNRNPUL2Q1KMD3 747 aaKnown RBP34.68■■■■□ 3.14
SEC22C-207ENST00000423701 FAM69CQ0P6D2 419 aa34.66■■■■□ 3.14
SEC22C-207ENST00000423701 GLI2P10070 1586 aa34.63■■■■□ 3.13
SEC22C-207ENST00000423701 CCDC18Q5T9S5 1454 aa34.59■■■■□ 3.13
SEC22C-207ENST00000423701 VPS8Q8N3P4 1428 aa34.56■■■■□ 3.12
SEC22C-207ENST00000423701 KCNH8Q96L42 1107 aa34.53■■■■□ 3.12
SEC22C-207ENST00000423701 PLEKHD1A6NEE1 506 aa34.52■■■■□ 3.12
SEC22C-207ENST00000423701 MAP3K4Q9Y6R4 1608 aa34.52■■■■□ 3.12
SEC22C-207ENST00000423701 TSPOAP1O95153 1857 aa34.46■■■■□ 3.11
SEC22C-207ENST00000423701 CFAP43Q8NDM7 1665 aa34.45■■■■□ 3.11
SEC22C-207ENST00000423701 CDK11AQ9UQ88 783 aaPredicted RBP34.45■■■■□ 3.1
SEC22C-207ENST00000423701 ABCA9Q8IUA7 1624 aa34.44■■■■□ 3.1
SEC22C-207ENST00000423701 PPRC1Q5VV67 1664 aaKnown RBP34.42■■■■□ 3.1
SEC22C-207ENST00000423701 TROQ12816 1431 aaPredicted RBP34.41■■■■□ 3.1
SEC22C-207ENST00000423701 MAGI3Q5TCQ9 1506 aa34.41■■■■□ 3.1
SEC22C-207ENST00000423701 CD109Q6YHK3 1445 aa34.37■■■■□ 3.09
SEC22C-207ENST00000423701 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.36■■■■□ 3.09
SEC22C-207ENST00000423701 KIF14Q15058 1648 aa34.35■■■■□ 3.09
SEC22C-207ENST00000423701 TTC37Q6PGP7 1564 aa34.34■■■■□ 3.09
SEC22C-207ENST00000423701 TIAM1Q13009 1591 aa34.3■■■■□ 3.08
SEC22C-207ENST00000423701 TEX14Q8IWB6 1497 aa34.28■■■■□ 3.08
SEC22C-207ENST00000423701 MTUS2Q5JR59 1369 aa34.23■■■■□ 3.07
SEC22C-207ENST00000423701 EHBP1L1Q8N3D4 1523 aa34.23■■■■□ 3.07
SEC22C-207ENST00000423701 MAP3K1Q13233 1512 aa34.22■■■■□ 3.07
SEC22C-207ENST00000423701 MYO5CQ9NQX4 1742 aa34.17■■■■□ 3.06
SEC22C-207ENST00000423701 KDM6BO15054 1643 aa34.14■■■■□ 3.06
SEC22C-207ENST00000423701 LRRC9Q6ZRR7 1453 aa34.13■■■■□ 3.05
SEC22C-207ENST00000423701 PLCH2O75038 1416 aa34.12■■■■□ 3.05
SEC22C-207ENST00000423701 ARAP3Q8WWN8 1544 aa34.1■■■■□ 3.05
SEC22C-207ENST00000423701 NEO1Q92859 1461 aa34.09■■■■□ 3.05
SEC22C-207ENST00000423701 FANCAO15360 1455 aa34.08■■■■□ 3.05
SEC22C-207ENST00000423701 CFAP74Q9C0B2 1584 aa34.08■■■■□ 3.05
SEC22C-207ENST00000423701 PREX2Q70Z35 1606 aa34.07■■■■□ 3.05
SEC22C-207ENST00000423701 APLP2Q06481 763 aa34.07■■■■□ 3.04
SEC22C-207ENST00000423701 CDC42BPAQ5VT25 1732 aa34.06■■■■□ 3.04
SEC22C-207ENST00000423701 SUPT6HQ7KZ85 1726 aaKnown RBP34.06■■■■□ 3.04
SEC22C-207ENST00000423701 KANK4Q5T7N3 995 aaPredicted RBP34.05■■■■□ 3.04
SEC22C-207ENST00000423701 COL17A1Q9UMD9 1497 aaPredicted RBP34.04■■■■□ 3.04
SEC22C-207ENST00000423701 CDC42BPBQ9Y5S2 1711 aa34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms