RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 NISCHQ9Y2I1 1504 aa52.22■■■■■ 5.95
SEC22C-207ENST00000423701 CCDC180Q9P1Z9 1646 aa46.32■■■■■ 5
SEC22C-207ENST00000423701 ABCC9O60706 1549 aa44.99■■■■■ 4.79
SEC22C-207ENST00000423701 ZCCHC6Q5VYS8 1495 aaKnown RBP43.59■■■■■ 4.57
SEC22C-207ENST00000423701 NACADO15069 1562 aa43.43■■■■■ 4.54
SEC22C-207ENST00000423701 DCAF8L2P0C7V8 631 aa43.42■■■■■ 4.54
SEC22C-207ENST00000423701 RB1CC1Q8TDY2 1594 aa43.41■■■■■ 4.54
SEC22C-207ENST00000423701 MYO15BQ96JP2 1530 aa43.28■■■■■ 4.52
SEC22C-207ENST00000423701 DCAF1Q9Y4B6 1507 aa43.22■■■■■ 4.51
SEC22C-207ENST00000423701 UNC13AQ9UPW8 1703 aa42.49■■■■■ 4.39
SEC22C-207ENST00000423701 SCRIBQ14160 1630 aa42.29■■■■■ 4.36
SEC22C-207ENST00000423701 BICRAQ9NZM4 1560 aa42.12■■■■■ 4.33
SEC22C-207ENST00000423701 PABPN1Q86U42 306 aaKnown RBP eCLIP42.05■■■■■ 4.32
SEC22C-207ENST00000423701 SHROOM4Q9ULL8 1493 aa41.67■■■■■ 4.26
SEC22C-207ENST00000423701 EIF4G1Q04637 1599 aaKnown RBP40.97■■■■■ 4.15
SEC22C-207ENST00000423701 DNAJC5BQ9UF47 199 aa40.96■■■■■ 4.15
SEC22C-207ENST00000423701 CC2D2AQ9P2K1 1620 aa40.72■■■■■ 4.11
SEC22C-207ENST00000423701 CECR2Q9BXF3 1484 aa40.66■■■■■ 4.1
SEC22C-207ENST00000423701 SMARCA4P51532 1647 aa40.48■■■■■ 4.07
SEC22C-207ENST00000423701 BAZ1AQ9NRL2 1556 aaPredicted RBP40.46■■■■■ 4.07
SEC22C-207ENST00000423701 MROH2BQ7Z745 1585 aa40.26■■■■■ 4.04
SEC22C-207ENST00000423701 ATAD2BQ9ULI0 1458 aa40.15■■■■■ 4.02
SEC22C-207ENST00000423701 SMARCA2P51531 1590 aa40.12■■■■■ 4.01
SEC22C-207ENST00000423701 PEG3Q9GZU2 1588 aa40.07■■■■■ 4
SEC22C-207ENST00000423701 NCAPD3P42695 1498 aa40.06■■■■■ 4
SEC22C-207ENST00000423701 HMGXB3Q12766 1538 aa39.93■■■■□ 3.98
SEC22C-207ENST00000423701 RSF1Q96T23 1441 aaPredicted RBP39.89■■■■□ 3.98
SEC22C-207ENST00000423701 WIZO95785 1651 aa39.86■■■■□ 3.97
SEC22C-207ENST00000423701 BAZ1BQ9UIG0 1483 aaKnown RBP39.84■■■■□ 3.97
SEC22C-207ENST00000423701 TOP2AP11388 1531 aaKnown RBP39.45■■■■□ 3.91
SEC22C-207ENST00000423701 SUPT5HO00267 1087 aaKnown RBP39.09■■■■□ 3.85
SEC22C-207ENST00000423701 NESP48681 1621 aa39.03■■■■□ 3.84
SEC22C-207ENST00000423701 LAMC3Q9Y6N6 1575 aa38.98■■■■□ 3.83
SEC22C-207ENST00000423701 CCDC88BA6NC98 1476 aa38.96■■■■□ 3.83
SEC22C-207ENST00000423701 CADPSQ9ULU8 1353 aa38.9■■■■□ 3.82
SEC22C-207ENST00000423701 CFTRP13569 1480 aa38.76■■■■□ 3.8
SEC22C-207ENST00000423701 ERCC6Q03468 1493 aa38.73■■■■□ 3.79
SEC22C-207ENST00000423701 PDS5BQ9NTI5 1447 aa38.66■■■■□ 3.78
SEC22C-207ENST00000423701 KIF21AQ7Z4S6 1674 aa38.61■■■■□ 3.77
SEC22C-207ENST00000423701 PRDM2Q13029 1718 aa38.55■■■■□ 3.76
SEC22C-207ENST00000423701 FANCD2Q9BXW9 1451 aa38.48■■■■□ 3.75
SEC22C-207ENST00000423701 THOC2Q8NI27 1593 aaKnown RBP38.41■■■■□ 3.74
SEC22C-207ENST00000423701 CEP164Q9UPV0 1460 aa38.41■■■■□ 3.74
SEC22C-207ENST00000423701 MRC2Q9UBG0 1479 aa38.29■■■■□ 3.72
SEC22C-207ENST00000423701 CUX2O14529 1486 aa38.21■■■■□ 3.71
SEC22C-207ENST00000423701 WDR62O43379 1518 aa38.17■■■■□ 3.7
SEC22C-207ENST00000423701 URB2Q14146 1524 aaKnown RBP38.09■■■■□ 3.69
SEC22C-207ENST00000423701 TOPBP1Q92547 1522 aa37.91■■■■□ 3.66
SEC22C-207ENST00000423701 DNMBPQ6XZF7 1577 aa37.91■■■■□ 3.66
SEC22C-207ENST00000423701 ABCC8Q09428 1581 aa37.88■■■■□ 3.66
SEC22C-207ENST00000423701 CUX1P39880 1505 aa37.76■■■■□ 3.64
SEC22C-207ENST00000423701 POLA1P09884 1462 aaPredicted RBP37.62■■■■□ 3.61
SEC22C-207ENST00000423701 WRNQ14191 1432 aaPredicted RBP eCLIP37.61■■■■□ 3.61
SEC22C-207ENST00000423701 FGD5Q6ZNL6 1462 aa37.58■■■■□ 3.61
SEC22C-207ENST00000423701 IFT140Q96RY7 1462 aa37.58■■■■□ 3.61
SEC22C-207ENST00000423701 SYNJ1O43426 1573 aa37.55■■■■□ 3.6
SEC22C-207ENST00000423701 BIVM-ERCC5R4GMW8 1640 aa37.53■■■■□ 3.6
SEC22C-207ENST00000423701 TOP2BQ02880 1626 aa37.52■■■■□ 3.6
SEC22C-207ENST00000423701 TARBP1Q13395 1621 aaKnown RBP37.49■■■■□ 3.59
SEC22C-207ENST00000423701 RAD54L2Q9Y4B4 1467 aa37.44■■■■□ 3.58
SEC22C-207ENST00000423701 SOGA1O94964 1423 aa37.43■■■■□ 3.58
SEC22C-207ENST00000423701 ZNF608Q9ULD9 1512 aaPredicted RBP37.41■■■■□ 3.58
SEC22C-207ENST00000423701 EIF4G3O43432 1585 aaKnown RBP37.3■■■■□ 3.56
SEC22C-207ENST00000423701 WDR97A6NE52 1622 aa37.3■■■■□ 3.56
SEC22C-207ENST00000423701 ABCA10Q8WWZ4 1543 aa37.22■■■■□ 3.55
SEC22C-207ENST00000423701 AQRO60306 1485 aaKnown RBP eCLIP37.21■■■■□ 3.551e-6■■■■■ 30.6
SEC22C-207ENST00000423701 TDRD9Q8NDG6 1382 aaKnown RBP37.18■■■■□ 3.54
SEC22C-207ENST00000423701 ABCA5Q8WWZ7 1642 aa37.08■■■■□ 3.53
SEC22C-207ENST00000423701 GAPVD1Q14C86 1478 aa37.02■■■■□ 3.52
SEC22C-207ENST00000423701 PBRM1Q86U86 1689 aa36.97■■■■□ 3.51
SEC22C-207ENST00000423701 GRIN2BQ13224 1484 aa36.97■■■■□ 3.51
SEC22C-207ENST00000423701 SNAPC4Q5SXM2 1469 aa36.9■■■■□ 3.5
SEC22C-207ENST00000423701 TRIM41Q8WV44 630 aa36.88■■■■□ 3.5
SEC22C-207ENST00000423701 MAGI1Q96QZ7 1491 aaPredicted RBP36.85■■■■□ 3.49
SEC22C-207ENST00000423701 KIF27Q86VH2 1401 aa36.78■■■■□ 3.48
SEC22C-207ENST00000423701 ERICH3Q5RHP9 1530 aa36.78■■■■□ 3.48
SEC22C-207ENST00000423701 CHD1O14646 1710 aa36.76■■■■□ 3.48
SEC22C-207ENST00000423701 ADAMTS12P58397 1594 aa36.7■■■■□ 3.47
SEC22C-207ENST00000423701 SYNJ2O15056 1496 aa36.69■■■■□ 3.46
SEC22C-207ENST00000423701 FBLN2P98095 1184 aa36.66■■■■□ 3.46
SEC22C-207ENST00000423701 CHIC1Q5VXU3 224 aa36.66■■■■□ 3.46
SEC22C-207ENST00000423701 OSCARQ8IYS5 282 aa36.62■■■■□ 3.45
SEC22C-207ENST00000423701 CHMP7Q8WUX9 453 aaPredicted RBP36.61■■■■□ 3.45
SEC22C-207ENST00000423701 DNAJC5Q9H3Z4 198 aa36.61■■■■□ 3.45
SEC22C-207ENST00000423701 FHAD1B1AJZ9 1412 aa36.6■■■■□ 3.45
SEC22C-207ENST00000423701 RUSC2Q8N2Y8 1516 aa36.58■■■■□ 3.45
SEC22C-207ENST00000423701 IGF1RP08069 1367 aa36.58■■■■□ 3.45
SEC22C-207ENST00000423701 CUL7Q14999 1698 aa36.52■■■■□ 3.44
SEC22C-207ENST00000423701 GRIN2AQ12879 1464 aa36.52■■■■□ 3.44
SEC22C-207ENST00000423701 CARMIL1Q5VZK9 1371 aa36.37■■■■□ 3.41
SEC22C-207ENST00000423701 CLASP1Q7Z460 1538 aa36.37■■■■□ 3.41
SEC22C-207ENST00000423701 CEP170Q5SW79 1584 aa36.35■■■■□ 3.41
SEC22C-207ENST00000423701 NUP160Q12769 1436 aa36.34■■■■□ 3.41
SEC22C-207ENST00000423701 EEA1Q15075 1411 aa36.29■■■■□ 3.4
SEC22C-207ENST00000423701 RAPGEF2Q9Y4G8 1499 aa36.22■■■■□ 3.39
SEC22C-207ENST00000423701 PRXQ9BXM0 1461 aa36.18■■■■□ 3.38
SEC22C-207ENST00000423701 CSRNP3Q8WYN3 585 aa36.16■■■■□ 3.38
SEC22C-207ENST00000423701 FAM9AQ8IZU1 332 aaPredicted RBP36.13■■■■□ 3.37
SEC22C-207ENST00000423701 ARHGEF11O15085 1522 aa36.11■■■■□ 3.37
SEC22C-207ENST00000423701 RIMBP3CA6NJZ7 1639 aa36.1■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms