RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 SHROOM2Q13796 1616 aa32.35■■■□□ 2.77
GCDH-202ENST00000421816 CSRNP3Q8WYN3 585 aa32.34■■■□□ 2.77
GCDH-202ENST00000421816 KIAA0586Q9BVV6 1533 aa32.31■■■□□ 2.76
GCDH-202ENST00000421816 FAM9AQ8IZU1 332 aaPredicted RBP32.22■■■□□ 2.75
GCDH-202ENST00000421816 JPH4Q96JJ6 628 aa32.2■■■□□ 2.75
GCDH-202ENST00000421816 ERCC6L2Q5T890 1561 aa32.19■■■□□ 2.74
GCDH-202ENST00000421816 ARAP1Q96P48 1450 aa32.19■■■□□ 2.74
GCDH-202ENST00000421816 IQGAP2Q13576 1575 aa32.16■■■□□ 2.74
GCDH-202ENST00000421816 CTTNBP2Q8WZ74 1663 aa32.15■■■□□ 2.74
GCDH-202ENST00000421816 PRG4Q92954 1404 aaPredicted RBP32.14■■■□□ 2.74
GCDH-202ENST00000421816 KIF21BO75037 1637 aa32.12■■■□□ 2.73
GCDH-202ENST00000421816 CYB5RLQ6IPT4 315 aa32.06■■■□□ 2.72
GCDH-202ENST00000421816 UGGT2Q9NYU1 1516 aa32.01■■■□□ 2.72
GCDH-202ENST00000421816 DISP1Q96F81 1524 aa31.93■■■□□ 2.7
GCDH-202ENST00000421816 CARMIL2Q6F5E8 1435 aa31.92■■■□□ 2.7
GCDH-202ENST00000421816 GOLGA3Q08378 1498 aa31.9■■■□□ 2.7
GCDH-202ENST00000421816 KIAA0556O60303 1618 aa31.86■■■□□ 2.69
GCDH-202ENST00000421816 TNIKQ9UKE5 1360 aa31.82■■■□□ 2.69
GCDH-202ENST00000421816 PTPRGP23470 1445 aa31.77■■■□□ 2.68
GCDH-202ENST00000421816 EHMT2Q96KQ7 1210 aa31.75■■■□□ 2.67
GCDH-202ENST00000421816 SAMD9Q5K651 1589 aa31.74■■■□□ 2.67
GCDH-202ENST00000421816 UBTFP17480 764 aaKnown RBP31.74■■■□□ 2.67
GCDH-202ENST00000421816 ADCY10Q96PN6 1610 aa31.67■■■□□ 2.66
GCDH-202ENST00000421816 TTBK1Q5TCY1 1321 aaPredicted RBP31.64■■■□□ 2.66
GCDH-202ENST00000421816 EFCAB5A4FU69 1503 aa31.61■■■□□ 2.65
GCDH-202ENST00000421816 UHRF1BP1LA0JNW5 1464 aa31.59■■■□□ 2.65
GCDH-202ENST00000421816 UACAQ9BZF9 1416 aa31.58■■■□□ 2.65
GCDH-202ENST00000421816 RANGAP1P46060 587 aaPredicted RBP31.58■■■□□ 2.65
GCDH-202ENST00000421816 P3H3Q8IVL6 736 aa31.57■■■□□ 2.64
GCDH-202ENST00000421816 ABCC2Q92887 1545 aa31.54■■■□□ 2.64
GCDH-202ENST00000421816 ABCA8O94911 1581 aa31.51■■■□□ 2.64
GCDH-202ENST00000421816 PLB1Q6P1J6 1458 aa31.5■■■□□ 2.63
GCDH-202ENST00000421816 FHOD3Q2V2M9 1422 aa31.49■■■□□ 2.63
GCDH-202ENST00000421816 ARHGAP35Q9NRY4 1499 aa31.48■■■□□ 2.63
GCDH-202ENST00000421816 NPM1P06748 294 aaKnown RBP eCLIP31.46■■■□□ 2.63
GCDH-202ENST00000421816 MAPKBP1O60336 1514 aa31.44■■■□□ 2.62
GCDH-202ENST00000421816 KDM5BQ9UGL1 1544 aa31.43■■■□□ 2.62
GCDH-202ENST00000421816 RAPGEF6Q8TEU7 1601 aa31.38■■■□□ 2.61
GCDH-202ENST00000421816 ZCCHC11Q5TAX3 1644 aaKnown RBP31.37■■■□□ 2.61
GCDH-202ENST00000421816 LOC105371045A0A1W2PR82 267 aa31.34■■■□□ 2.61
GCDH-202ENST00000421816 CLIP1P30622 1438 aa31.32■■■□□ 2.6
GCDH-202ENST00000421816 TRHP20396 242 aaPredicted RBP31.31■■■□□ 2.6
GCDH-202ENST00000421816 FMN1Q68DA7 1419 aa31.29■■■□□ 2.6
GCDH-202ENST00000421816 ASXL2Q76L83 1435 aa31.26■■■□□ 2.6
GCDH-202ENST00000421816 KIF13AQ9H1H9 1805 aa31.26■■■□□ 2.59
GCDH-202ENST00000421816 NUP153P49790 1475 aaKnown RBP31.25■■■□□ 2.59
GCDH-202ENST00000421816 ABCC10Q5T3U5 1492 aa31.24■■■□□ 2.59
GCDH-202ENST00000421816 ATP10BO94823 1461 aa31.23■■■□□ 2.59
GCDH-202ENST00000421816 CEP162Q5TB80 1403 aa31.23■■■□□ 2.59
GCDH-202ENST00000421816 DIP2BQ9P265 1576 aa31.22■■■□□ 2.59
GCDH-202ENST00000421816 WDR7Q9Y4E6 1490 aa31.14■■■□□ 2.58
GCDH-202ENST00000421816 HECW1Q76N89 1606 aa31.14■■■□□ 2.58
GCDH-202ENST00000421816 ARID3CA6NKF2 412 aa31.13■■■□□ 2.57
GCDH-202ENST00000421816 FAM69CQ0P6D2 419 aa31.11■■■□□ 2.57
GCDH-202ENST00000421816 GLI2P10070 1586 aa31.1■■■□□ 2.57
GCDH-202ENST00000421816 EPRSP07814 1512 aaKnown RBP31.09■■■□□ 2.57
GCDH-202ENST00000421816 PCF11O94913 1555 aaKnown RBP31.09■■■□□ 2.57
GCDH-202ENST00000421816 CASKIN1Q8WXD9 1431 aa31.08■■■□□ 2.57
GCDH-202ENST00000421816 LRRIQ1Q96JM4 1722 aa31.04■■■□□ 2.56
GCDH-202ENST00000421816 CDK13Q14004 1512 aaKnown RBP31.04■■■□□ 2.56
GCDH-202ENST00000421816 FYCO1Q9BQS8 1478 aa31.02■■■□□ 2.56
GCDH-202ENST00000421816 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.01■■■□□ 2.55
GCDH-202ENST00000421816 HNRNPUL2Q1KMD3 747 aaKnown RBP31.01■■■□□ 2.55
GCDH-202ENST00000421816 ATP1B4Q9UN42 357 aaPredicted RBP31■■■□□ 2.55
GCDH-202ENST00000421816 MAP3K4Q9Y6R4 1608 aa30.97■■■□□ 2.55
GCDH-202ENST00000421816 KCNH8Q96L42 1107 aa30.94■■■□□ 2.54
GCDH-202ENST00000421816 CCDC18Q5T9S5 1454 aa30.94■■■□□ 2.54
GCDH-202ENST00000421816 PLEKHD1A6NEE1 506 aa30.93■■■□□ 2.54
GCDH-202ENST00000421816 TSPOAP1O95153 1857 aa30.92■■■□□ 2.54
GCDH-202ENST00000421816 CFAP43Q8NDM7 1665 aa30.91■■■□□ 2.54
GCDH-202ENST00000421816 PPRC1Q5VV67 1664 aaKnown RBP30.9■■■□□ 2.54
GCDH-202ENST00000421816 ABCA9Q8IUA7 1624 aa30.88■■■□□ 2.53
GCDH-202ENST00000421816 VPS8Q8N3P4 1428 aa30.86■■■□□ 2.53
GCDH-202ENST00000421816 CDK11AQ9UQ88 783 aaPredicted RBP30.84■■■□□ 2.53
GCDH-202ENST00000421816 CD109Q6YHK3 1445 aa30.81■■■□□ 2.52
GCDH-202ENST00000421816 TROQ12816 1431 aaPredicted RBP30.8■■■□□ 2.52
GCDH-202ENST00000421816 MAGI3Q5TCQ9 1506 aa30.79■■■□□ 2.52
GCDH-202ENST00000421816 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.77■■■□□ 2.52
GCDH-202ENST00000421816 TEX14Q8IWB6 1497 aa30.76■■■□□ 2.52
GCDH-202ENST00000421816 TTC37Q6PGP7 1564 aa30.73■■■□□ 2.51
GCDH-202ENST00000421816 KIF14Q15058 1648 aa30.73■■■□□ 2.51
GCDH-202ENST00000421816 TIAM1Q13009 1591 aa30.65■■■□□ 2.5
GCDH-202ENST00000421816 KDM6BO15054 1643 aa30.65■■■□□ 2.5
GCDH-202ENST00000421816 MAP3K1Q13233 1512 aa30.61■■■□□ 2.49
GCDH-202ENST00000421816 MYO5CQ9NQX4 1742 aa30.6■■■□□ 2.49
GCDH-202ENST00000421816 EHBP1L1Q8N3D4 1523 aa30.59■■■□□ 2.49
GCDH-202ENST00000421816 MTUS2Q5JR59 1369 aa30.59■■■□□ 2.49
GCDH-202ENST00000421816 PLCH2O75038 1416 aa30.58■■■□□ 2.49
GCDH-202ENST00000421816 NEO1Q92859 1461 aa30.57■■■□□ 2.48
GCDH-202ENST00000421816 ARAP3Q8WWN8 1544 aa30.57■■■□□ 2.48
GCDH-202ENST00000421816 COL17A1Q9UMD9 1497 aaPredicted RBP30.56■■■□□ 2.48
GCDH-202ENST00000421816 PHLDB1Q86UU1 1377 aa30.55■■■□□ 2.48
GCDH-202ENST00000421816 CFAP74Q9C0B2 1584 aa30.54■■■□□ 2.48
GCDH-202ENST00000421816 FANCAO15360 1455 aa30.52■■■□□ 2.48
GCDH-202ENST00000421816 PREX2Q70Z35 1606 aa30.5■■■□□ 2.47
GCDH-202ENST00000421816 CDC42BPAQ5VT25 1732 aa30.5■■■□□ 2.47
GCDH-202ENST00000421816 CDC42BPBQ9Y5S2 1711 aa30.5■■■□□ 2.47
GCDH-202ENST00000421816 LRRC9Q6ZRR7 1453 aa30.5■■■□□ 2.47
GCDH-202ENST00000421816 AKNAQ7Z591 1439 aa30.47■■■□□ 2.47
GCDH-202ENST00000421816 SUPT6HQ7KZ85 1726 aaKnown RBP30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms