RNA–Protein interactions for RNA: ENST00000421601.2

LINC00443-201, long intergenic non-protein coding RNA 443, humanhuman

TSL 3 BASIC

Gene LINC00443, Length 1,170 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00443-201ENST00000421601 EIF4G3O43432 1585 aaKnown RBP19.21■□□□□ 0.67
LINC00443-201ENST00000421601 PBRM1Q86U86 1689 aa19.2■□□□□ 0.66
LINC00443-201ENST00000421601 CUL7Q14999 1698 aa19.18■□□□□ 0.66
LINC00443-201ENST00000421601 FHAD1B1AJZ9 1412 aa19.16■□□□□ 0.66
LINC00443-201ENST00000421601 SNAPC4Q5SXM2 1469 aa19.13■□□□□ 0.65
LINC00443-201ENST00000421601 ADAMTS12P58397 1594 aa19.1■□□□□ 0.65
LINC00443-201ENST00000421601 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
LINC00443-201ENST00000421601 RANGAP1P46060 587 aaPredicted RBP19.08■□□□□ 0.64
LINC00443-201ENST00000421601 CHMP7Q8WUX9 453 aaPredicted RBP19.08■□□□□ 0.64
LINC00443-201ENST00000421601 CEP162Q5TB80 1403 aa19.07■□□□□ 0.64
LINC00443-201ENST00000421601 FBLN2P98095 1184 aa19.06■□□□□ 0.64
LINC00443-201ENST00000421601 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
LINC00443-201ENST00000421601 CLIP1P30622 1438 aa19■□□□□ 0.63
LINC00443-201ENST00000421601 GRIN2AQ12879 1464 aa18.99■□□□□ 0.63
LINC00443-201ENST00000421601 CTTNBP2Q8WZ74 1663 aa18.92■□□□□ 0.62
LINC00443-201ENST00000421601 KIAA0586Q9BVV6 1533 aa18.89■□□□□ 0.61
LINC00443-201ENST00000421601 NUP160Q12769 1436 aa18.87■□□□□ 0.61
LINC00443-201ENST00000421601 P3H3Q8IVL6 736 aa18.87■□□□□ 0.61
LINC00443-201ENST00000421601 ARHGAP35Q9NRY4 1499 aa18.87■□□□□ 0.61
LINC00443-201ENST00000421601 CEP170Q5SW79 1584 aa18.86■□□□□ 0.61
LINC00443-201ENST00000421601 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
LINC00443-201ENST00000421601 CHD1O14646 1710 aa18.84■□□□□ 0.61
LINC00443-201ENST00000421601 IQGAP2Q13576 1575 aa18.84■□□□□ 0.61
LINC00443-201ENST00000421601 ARAP1Q96P48 1450 aa18.82■□□□□ 0.6
LINC00443-201ENST00000421601 JPH4Q96JJ6 628 aa18.81■□□□□ 0.6
LINC00443-201ENST00000421601 EFCAB5A4FU69 1503 aa18.78■□□□□ 0.6
LINC00443-201ENST00000421601 VPS8Q8N3P4 1428 aa18.77■□□□□ 0.6
LINC00443-201ENST00000421601 UGGT2Q9NYU1 1516 aa18.77■□□□□ 0.6
LINC00443-201ENST00000421601 FHOD3Q2V2M9 1422 aa18.75■□□□□ 0.59
LINC00443-201ENST00000421601 SAMD9Q5K651 1589 aa18.74■□□□□ 0.59
LINC00443-201ENST00000421601 OSCARQ8IYS5 282 aa18.71■□□□□ 0.59
LINC00443-201ENST00000421601 DISP1Q96F81 1524 aa18.69■□□□□ 0.58
LINC00443-201ENST00000421601 APLP2Q06481 763 aa18.67■□□□□ 0.58
LINC00443-201ENST00000421601 PPARGC1BQ86YN6 1023 aaKnown RBP18.67■□□□□ 0.58
LINC00443-201ENST00000421601 CARMIL2Q6F5E8 1435 aa18.66■□□□□ 0.58
LINC00443-201ENST00000421601 FMN1Q68DA7 1419 aa18.66■□□□□ 0.58
LINC00443-201ENST00000421601 PRG4Q92954 1404 aaPredicted RBP18.66■□□□□ 0.58
LINC00443-201ENST00000421601 CLASP1Q7Z460 1538 aa18.65■□□□□ 0.58
LINC00443-201ENST00000421601 ATP1B4Q9UN42 357 aaPredicted RBP18.65■□□□□ 0.58
LINC00443-201ENST00000421601 TTBK1Q5TCY1 1321 aaPredicted RBP18.65■□□□□ 0.58
LINC00443-201ENST00000421601 KIAA0556O60303 1618 aa18.64■□□□□ 0.57
LINC00443-201ENST00000421601 RNF39Q9H2S5 420 aa18.62■□□□□ 0.57
LINC00443-201ENST00000421601 SHROOM2Q13796 1616 aa18.6■□□□□ 0.57
LINC00443-201ENST00000421601 CASKIN1Q8WXD9 1431 aa18.59■□□□□ 0.57
LINC00443-201ENST00000421601 PCF11O94913 1555 aaKnown RBP18.55■□□□□ 0.56
LINC00443-201ENST00000421601 FYCO1Q9BQS8 1478 aa18.54■□□□□ 0.56
LINC00443-201ENST00000421601 DCAF8L1A6NGE4 600 aa18.54■□□□□ 0.56
LINC00443-201ENST00000421601 PTPRGP23470 1445 aa18.54■□□□□ 0.56
LINC00443-201ENST00000421601 ERCC6L2Q5T890 1561 aa18.53■□□□□ 0.56
LINC00443-201ENST00000421601 KANK4Q5T7N3 995 aaPredicted RBP18.52■□□□□ 0.56
LINC00443-201ENST00000421601 MAP3K1Q13233 1512 aa18.49■□□□□ 0.55
LINC00443-201ENST00000421601 PLB1Q6P1J6 1458 aa18.46■□□□□ 0.55
LINC00443-201ENST00000421601 ARID3CA6NKF2 412 aa18.46■□□□□ 0.55
LINC00443-201ENST00000421601 TRIM26Q12899 539 aaPredicted RBP18.45■□□□□ 0.54
LINC00443-201ENST00000421601 TIAM1Q13009 1591 aa18.45■□□□□ 0.54
LINC00443-201ENST00000421601 RAPGEF6Q8TEU7 1601 aa18.44■□□□□ 0.54
LINC00443-201ENST00000421601 HECW1Q76N89 1606 aa18.43■□□□□ 0.54
LINC00443-201ENST00000421601 EPRSP07814 1512 aaKnown RBP18.42■□□□□ 0.54
LINC00443-201ENST00000421601 ABCA8O94911 1581 aa18.42■□□□□ 0.54
LINC00443-201ENST00000421601 NUP153P49790 1475 aaKnown RBP18.41■□□□□ 0.54
LINC00443-201ENST00000421601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.41■□□□□ 0.54
LINC00443-201ENST00000421601 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
LINC00443-201ENST00000421601 UACAQ9BZF9 1416 aa18.4■□□□□ 0.54
LINC00443-201ENST00000421601 CCDC18Q5T9S5 1454 aa18.4■□□□□ 0.54
LINC00443-201ENST00000421601 LRRC9Q6ZRR7 1453 aa18.4■□□□□ 0.54
LINC00443-201ENST00000421601 LRRIQ1Q96JM4 1722 aa18.4■□□□□ 0.54
LINC00443-201ENST00000421601 CFAP43Q8NDM7 1665 aa18.38■□□□□ 0.53
LINC00443-201ENST00000421601 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
LINC00443-201ENST00000421601 CDK13Q14004 1512 aaKnown RBP18.37■□□□□ 0.53
LINC00443-201ENST00000421601 MTUS2Q5JR59 1369 aa18.35■□□□□ 0.53
LINC00443-201ENST00000421601 CDK11AQ9UQ88 783 aaPredicted RBP18.35■□□□□ 0.53
LINC00443-201ENST00000421601 ATP10BO94823 1461 aa18.34■□□□□ 0.53
LINC00443-201ENST00000421601 ABCC2Q92887 1545 aa18.3■□□□□ 0.52
LINC00443-201ENST00000421601 PLEKHD1A6NEE1 506 aa18.3■□□□□ 0.52
LINC00443-201ENST00000421601 UHRF1BP1LA0JNW5 1464 aa18.3■□□□□ 0.52
LINC00443-201ENST00000421601 ARHGEF11O15085 1522 aa18.29■□□□□ 0.52
LINC00443-201ENST00000421601 MAGI3Q5TCQ9 1506 aa18.29■□□□□ 0.52
LINC00443-201ENST00000421601 HOXD11P31277 338 aaPredicted RBP18.26■□□□□ 0.51
LINC00443-201ENST00000421601 EHBP1L1Q8N3D4 1523 aa18.26■□□□□ 0.51
LINC00443-201ENST00000421601 C1QBPQ07021 282 aaKnown RBP18.25■□□□□ 0.51
LINC00443-201ENST00000421601 PHLDB1Q86UU1 1377 aa18.24■□□□□ 0.51
LINC00443-201ENST00000421601 CYB5RLQ6IPT4 315 aa18.23■□□□□ 0.51
LINC00443-201ENST00000421601 TROQ12816 1431 aaPredicted RBP18.23■□□□□ 0.51
LINC00443-201ENST00000421601 NCOA2Q15596 1464 aa18.22■□□□□ 0.51
LINC00443-201ENST00000421601 RIMBP3CA6NJZ7 1639 aa18.22■□□□□ 0.51
LINC00443-201ENST00000421601 RIMBP3BA6NNM3 1639 aa18.22■□□□□ 0.51
LINC00443-201ENST00000421601 RIMBP3Q9UFD9 1639 aa18.22■□□□□ 0.51
LINC00443-201ENST00000421601 KDM5BQ9UGL1 1544 aa18.22■□□□□ 0.51
LINC00443-201ENST00000421601 ADCY10Q96PN6 1610 aa18.21■□□□□ 0.51
LINC00443-201ENST00000421601 NPM1P06748 294 aaKnown RBP eCLIP18.2■□□□□ 0.5
LINC00443-201ENST00000421601 SUPT6HQ7KZ85 1726 aaKnown RBP18.2■□□□□ 0.5
LINC00443-201ENST00000421601 RRBP1Q9P2E9 1410 aaKnown RBP18.17■□□□□ 0.5
LINC00443-201ENST00000421601 ZCCHC11Q5TAX3 1644 aaKnown RBP18.17■□□□□ 0.5
LINC00443-201ENST00000421601 KCNH8Q96L42 1107 aa18.16■□□□□ 0.5
LINC00443-201ENST00000421601 CCNB3Q8WWL7 1395 aa18.16■□□□□ 0.5
LINC00443-201ENST00000421601 MYOM3Q5VTT5 1437 aa18.14■□□□□ 0.49
LINC00443-201ENST00000421601 FAM50AQ14320 339 aaKnown RBP18.13■□□□□ 0.49
LINC00443-201ENST00000421601 KIF14Q15058 1648 aa18.11■□□□□ 0.49
LINC00443-201ENST00000421601 FGD6Q6ZV73 1430 aa18.1■□□□□ 0.49
LINC00443-201ENST00000421601 ABCC10Q5T3U5 1492 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms