RNA–Protein interactions for RNA: ENST00000421601.2

LINC00443-201, long intergenic non-protein coding RNA 443, humanhuman

TSL 3 BASIC

Gene LINC00443, Length 1,170 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00443-201ENST00000421601 AEBP2Q6ZN18 517 aaPredicted RBP28.72■■■□□ 2.19
LINC00443-201ENST00000421601 NISCHQ9Y2I1 1504 aa27.49■■□□□ 1.99
LINC00443-201ENST00000421601 CHIC1Q5VXU3 224 aa26.67■■□□□ 1.86
LINC00443-201ENST00000421601 SENP3Q9H4L4 574 aaPredicted RBP24.51■■□□□ 1.51
LINC00443-201ENST00000421601 PHF23Q9BUL5 403 aaPredicted RBP24.16■■□□□ 1.46
LINC00443-201ENST00000421601 CCDC180Q9P1Z9 1646 aa24.02■■□□□ 1.44
LINC00443-201ENST00000421601 FOXD1Q16676 465 aa23.07■■□□□ 1.28
LINC00443-201ENST00000421601 POTEDQ86YR6 584 aa23.07■■□□□ 1.28
LINC00443-201ENST00000421601 ABCC9O60706 1549 aa23.03■■□□□ 1.28
LINC00443-201ENST00000421601 ZCCHC6Q5VYS8 1495 aaKnown RBP23.01■■□□□ 1.27
LINC00443-201ENST00000421601 DCAF8L2P0C7V8 631 aa22.91■■□□□ 1.26
LINC00443-201ENST00000421601 DCAF1Q9Y4B6 1507 aa22.71■■□□□ 1.23
LINC00443-201ENST00000421601 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
LINC00443-201ENST00000421601 NACADO15069 1562 aa22.49■■□□□ 1.19
LINC00443-201ENST00000421601 RB1CC1Q8TDY2 1594 aa22.34■■□□□ 1.17
LINC00443-201ENST00000421601 SHROOM4Q9ULL8 1493 aa22.29■■□□□ 1.16
LINC00443-201ENST00000421601 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
LINC00443-201ENST00000421601 MSH5O43196 834 aa21.85■■□□□ 1.09
LINC00443-201ENST00000421601 UNC13AQ9UPW8 1703 aa21.83■■□□□ 1.08
LINC00443-201ENST00000421601 PABPN1Q86U42 306 aaKnown RBP eCLIP21.73■■□□□ 1.07
LINC00443-201ENST00000421601 BICRAQ9NZM4 1560 aa21.67■■□□□ 1.06
LINC00443-201ENST00000421601 CECR2Q9BXF3 1484 aa21.4■■□□□ 1.02
LINC00443-201ENST00000421601 SUPT5HO00267 1087 aaKnown RBP21.37■■□□□ 1.01
LINC00443-201ENST00000421601 RSF1Q96T23 1441 aaPredicted RBP21.26■□□□□ 0.99
LINC00443-201ENST00000421601 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
LINC00443-201ENST00000421601 BAZ1AQ9NRL2 1556 aaPredicted RBP21.23■□□□□ 0.99
LINC00443-201ENST00000421601 PIAS4Q8N2W9 510 aaPredicted RBP21.22■□□□□ 0.99
LINC00443-201ENST00000421601 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
LINC00443-201ENST00000421601 EIF4G1Q04637 1599 aaKnown RBP21.03■□□□□ 0.96
LINC00443-201ENST00000421601 WIZO95785 1651 aa21.02■□□□□ 0.96
LINC00443-201ENST00000421601 ATAD2BQ9ULI0 1458 aa20.92■□□□□ 0.94
LINC00443-201ENST00000421601 PPP6R1Q9UPN7 881 aa20.9■□□□□ 0.94
LINC00443-201ENST00000421601 PEG3Q9GZU2 1588 aa20.89■□□□□ 0.94
LINC00443-201ENST00000421601 SMARCA2P51531 1590 aa20.86■□□□□ 0.93
LINC00443-201ENST00000421601 CC2D2AQ9P2K1 1620 aa20.8■□□□□ 0.92
LINC00443-201ENST00000421601 TOP2AP11388 1531 aaKnown RBP20.79■□□□□ 0.92
LINC00443-201ENST00000421601 NCAPD3P42695 1498 aa20.79■□□□□ 0.92
LINC00443-201ENST00000421601 BAZ1BQ9UIG0 1483 aaKnown RBP20.76■□□□□ 0.91
LINC00443-201ENST00000421601 ADRA2BP18089 450 aa20.72■□□□□ 0.91
LINC00443-201ENST00000421601 HMGXB3Q12766 1538 aa20.67■□□□□ 0.9
LINC00443-201ENST00000421601 CCDC88BA6NC98 1476 aa20.63■□□□□ 0.89
LINC00443-201ENST00000421601 DNAJC5BQ9UF47 199 aa20.61■□□□□ 0.89
LINC00443-201ENST00000421601 PLPPR3Q6T4P5 718 aa20.49■□□□□ 0.87
LINC00443-201ENST00000421601 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
LINC00443-201ENST00000421601 CFTRP13569 1480 aa20.24■□□□□ 0.83
LINC00443-201ENST00000421601 NESP48681 1621 aa20.13■□□□□ 0.81
LINC00443-201ENST00000421601 TRIM41Q8WV44 630 aa20.12■□□□□ 0.81
LINC00443-201ENST00000421601 ABCC8Q09428 1581 aa20.07■□□□□ 0.8
LINC00443-201ENST00000421601 LAMC3Q9Y6N6 1575 aa20.07■□□□□ 0.8
LINC00443-201ENST00000421601 PRDM2Q13029 1718 aa20.02■□□□□ 0.79
LINC00443-201ENST00000421601 WRNQ14191 1432 aaPredicted RBP eCLIP20.01■□□□□ 0.79
LINC00443-201ENST00000421601 FANCD2Q9BXW9 1451 aa20■□□□□ 0.79
LINC00443-201ENST00000421601 PDS5BQ9NTI5 1447 aa19.98■□□□□ 0.79
LINC00443-201ENST00000421601 SYNJ1O43426 1573 aa19.89■□□□□ 0.77
LINC00443-201ENST00000421601 CEP164Q9UPV0 1460 aa19.88■□□□□ 0.77
LINC00443-201ENST00000421601 CUX1P39880 1505 aa19.86■□□□□ 0.77
LINC00443-201ENST00000421601 TOP2BQ02880 1626 aa19.83■□□□□ 0.76
LINC00443-201ENST00000421601 KIF21AQ7Z4S6 1674 aa19.82■□□□□ 0.76
LINC00443-201ENST00000421601 BIVM-ERCC5R4GMW8 1640 aa19.8■□□□□ 0.76
LINC00443-201ENST00000421601 ERCC6Q03468 1493 aa19.76■□□□□ 0.75
LINC00443-201ENST00000421601 URB2Q14146 1524 aaKnown RBP19.76■□□□□ 0.75
LINC00443-201ENST00000421601 FAM9AQ8IZU1 332 aaPredicted RBP19.75■□□□□ 0.75
LINC00443-201ENST00000421601 TOPBP1Q92547 1522 aa19.75■□□□□ 0.75
LINC00443-201ENST00000421601 DNMBPQ6XZF7 1577 aa19.74■□□□□ 0.75
LINC00443-201ENST00000421601 MRC2Q9UBG0 1479 aa19.71■□□□□ 0.75
LINC00443-201ENST00000421601 SOGA1O94964 1423 aa19.69■□□□□ 0.74
LINC00443-201ENST00000421601 FGD5Q6ZNL6 1462 aa19.68■□□□□ 0.74
LINC00443-201ENST00000421601 RUSC2Q8N2Y8 1516 aa19.64■□□□□ 0.73
LINC00443-201ENST00000421601 POLA1P09884 1462 aaPredicted RBP19.62■□□□□ 0.73
LINC00443-201ENST00000421601 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
LINC00443-201ENST00000421601 WDR62O43379 1518 aa19.59■□□□□ 0.73
LINC00443-201ENST00000421601 CSRNP3Q8WYN3 585 aa19.58■□□□□ 0.72
LINC00443-201ENST00000421601 EEA1Q15075 1411 aa19.58■□□□□ 0.72
LINC00443-201ENST00000421601 LOC105371045A0A1W2PR82 267 aa19.57■□□□□ 0.72
LINC00443-201ENST00000421601 THOC2Q8NI27 1593 aaKnown RBP19.56■□□□□ 0.72
LINC00443-201ENST00000421601 CUX2O14529 1486 aa19.54■□□□□ 0.72
LINC00443-201ENST00000421601 KIF27Q86VH2 1401 aa19.53■□□□□ 0.72
LINC00443-201ENST00000421601 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
LINC00443-201ENST00000421601 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
LINC00443-201ENST00000421601 TDRD9Q8NDG6 1382 aaKnown RBP19.45■□□□□ 0.7
LINC00443-201ENST00000421601 TARBP1Q13395 1621 aaKnown RBP19.44■□□□□ 0.7
LINC00443-201ENST00000421601 IFT140Q96RY7 1462 aa19.44■□□□□ 0.7
LINC00443-201ENST00000421601 IGF1RP08069 1367 aa19.43■□□□□ 0.7
LINC00443-201ENST00000421601 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
LINC00443-201ENST00000421601 MAPK8IP2Q13387 824 aaPredicted RBP19.39■□□□□ 0.69
LINC00443-201ENST00000421601 CACNB1Q02641 598 aaPredicted RBP19.38■□□□□ 0.69
LINC00443-201ENST00000421601 GAPVD1Q14C86 1478 aa19.36■□□□□ 0.69
LINC00443-201ENST00000421601 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.69
LINC00443-201ENST00000421601 ZNF608Q9ULD9 1512 aaPredicted RBP19.34■□□□□ 0.69
LINC00443-201ENST00000421601 DMRT2Q9Y5R5 561 aa19.33■□□□□ 0.68
LINC00443-201ENST00000421601 ABCA5Q8WWZ7 1642 aa19.33■□□□□ 0.68
LINC00443-201ENST00000421601 PRXQ9BXM0 1461 aa19.32■□□□□ 0.68
LINC00443-201ENST00000421601 CARMIL1Q5VZK9 1371 aa19.32■□□□□ 0.68
LINC00443-201ENST00000421601 UBTFP17480 764 aaKnown RBP19.31■□□□□ 0.68
LINC00443-201ENST00000421601 KIF21BO75037 1637 aa19.29■□□□□ 0.68
LINC00443-201ENST00000421601 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
LINC00443-201ENST00000421601 RAPGEF2Q9Y4G8 1499 aa19.28■□□□□ 0.68
LINC00443-201ENST00000421601 ERICH3Q5RHP9 1530 aa19.26■□□□□ 0.67
LINC00443-201ENST00000421601 GRIN2BQ13224 1484 aa19.25■□□□□ 0.67
LINC00443-201ENST00000421601 TNIKQ9UKE5 1360 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 296 ms