RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 JPH4Q96JJ6 628 aa25.1■■□□□ 1.61
FAM3A-209ENST00000421517 RAPGEF2Q9Y4G8 1499 aa25.05■■□□□ 1.6
FAM3A-209ENST00000421517 PRG4Q92954 1404 aaPredicted RBP25.03■■□□□ 1.6
FAM3A-209ENST00000421517 ERCC6L2Q5T890 1561 aa25■■□□□ 1.59
FAM3A-209ENST00000421517 EEA1Q15075 1411 aa24.97■■□□□ 1.59
FAM3A-209ENST00000421517 PRXQ9BXM0 1461 aa24.96■■□□□ 1.59
FAM3A-209ENST00000421517 IQGAP2Q13576 1575 aa24.9■■□□□ 1.58
FAM3A-209ENST00000421517 CSRNP3Q8WYN3 585 aa24.86■■□□□ 1.57
FAM3A-209ENST00000421517 CARMIL2Q6F5E8 1435 aa24.86■■□□□ 1.57
FAM3A-209ENST00000421517 UGGT2Q9NYU1 1516 aa24.83■■□□□ 1.57
FAM3A-209ENST00000421517 CHIC1Q5VXU3 224 aa24.82■■□□□ 1.56
FAM3A-209ENST00000421517 TNIKQ9UKE5 1360 aa24.78■■□□□ 1.56
FAM3A-209ENST00000421517 DISP1Q96F81 1524 aa24.75■■□□□ 1.55
FAM3A-209ENST00000421517 PTPRGP23470 1445 aa24.74■■□□□ 1.55
FAM3A-209ENST00000421517 CTTNBP2Q8WZ74 1663 aa24.74■■□□□ 1.55
FAM3A-209ENST00000421517 GOLGA3Q08378 1498 aa24.7■■□□□ 1.54
FAM3A-209ENST00000421517 TRHP20396 242 aaPredicted RBP24.67■■□□□ 1.54
FAM3A-209ENST00000421517 KIAA0556O60303 1618 aa24.66■■□□□ 1.54
FAM3A-209ENST00000421517 UHRF1BP1LA0JNW5 1464 aa24.65■■□□□ 1.54
FAM3A-209ENST00000421517 NPM1P06748 294 aaKnown RBP eCLIP24.65■■□□□ 1.54
FAM3A-209ENST00000421517 ADCY10Q96PN6 1610 aa24.64■■□□□ 1.54
FAM3A-209ENST00000421517 MAPKBP1O60336 1514 aa24.63■■□□□ 1.53
FAM3A-209ENST00000421517 KIF21BO75037 1637 aa24.63■■□□□ 1.53
FAM3A-209ENST00000421517 UACAQ9BZF9 1416 aa24.59■■□□□ 1.53
FAM3A-209ENST00000421517 ABCC2Q92887 1545 aa24.56■■□□□ 1.52
FAM3A-209ENST00000421517 ABCC10Q5T3U5 1492 aa24.51■■□□□ 1.51
FAM3A-209ENST00000421517 FAM9AQ8IZU1 332 aaPredicted RBP24.5■■□□□ 1.51
FAM3A-209ENST00000421517 KDM5BQ9UGL1 1544 aa24.5■■□□□ 1.51
FAM3A-209ENST00000421517 SAMD9Q5K651 1589 aa24.49■■□□□ 1.51
FAM3A-209ENST00000421517 PLB1Q6P1J6 1458 aa24.44■■□□□ 1.5
FAM3A-209ENST00000421517 ABCA8O94911 1581 aa24.43■■□□□ 1.5
FAM3A-209ENST00000421517 DIP2BQ9P265 1576 aa24.41■■□□□ 1.5
FAM3A-209ENST00000421517 KIF13AQ9H1H9 1805 aa24.4■■□□□ 1.5
FAM3A-209ENST00000421517 TTBK1Q5TCY1 1321 aaPredicted RBP24.4■■□□□ 1.5
FAM3A-209ENST00000421517 EFCAB5A4FU69 1503 aa24.4■■□□□ 1.5
FAM3A-209ENST00000421517 ASXL2Q76L83 1435 aa24.37■■□□□ 1.49
FAM3A-209ENST00000421517 FAM69CQ0P6D2 419 aa24.36■■□□□ 1.49
FAM3A-209ENST00000421517 GLI2P10070 1586 aa24.34■■□□□ 1.49
FAM3A-209ENST00000421517 ZCCHC11Q5TAX3 1644 aaKnown RBP24.33■■□□□ 1.49
FAM3A-209ENST00000421517 UBTFP17480 764 aaKnown RBP24.31■■□□□ 1.48
FAM3A-209ENST00000421517 P3H3Q8IVL6 736 aa24.27■■□□□ 1.48
FAM3A-209ENST00000421517 WDR7Q9Y4E6 1490 aa24.26■■□□□ 1.47
FAM3A-209ENST00000421517 EPRSP07814 1512 aaKnown RBP24.25■■□□□ 1.47
FAM3A-209ENST00000421517 RAPGEF6Q8TEU7 1601 aa24.24■■□□□ 1.47
FAM3A-209ENST00000421517 FHOD3Q2V2M9 1422 aa24.23■■□□□ 1.47
FAM3A-209ENST00000421517 ATP10BO94823 1461 aa24.22■■□□□ 1.47
FAM3A-209ENST00000421517 FMN1Q68DA7 1419 aa24.18■■□□□ 1.46
FAM3A-209ENST00000421517 ARHGAP35Q9NRY4 1499 aa24.18■■□□□ 1.46
FAM3A-209ENST00000421517 NUP153P49790 1475 aaKnown RBP24.16■■□□□ 1.46
FAM3A-209ENST00000421517 MAP3K4Q9Y6R4 1608 aa24.15■■□□□ 1.46
FAM3A-209ENST00000421517 RANGAP1P46060 587 aaPredicted RBP24.12■■□□□ 1.45
FAM3A-209ENST00000421517 TEX14Q8IWB6 1497 aa24.11■■□□□ 1.45
FAM3A-209ENST00000421517 CFAP43Q8NDM7 1665 aa24.08■■□□□ 1.45
FAM3A-209ENST00000421517 MAGI3Q5TCQ9 1506 aa24.08■■□□□ 1.45
FAM3A-209ENST00000421517 PPRC1Q5VV67 1664 aaKnown RBP24.08■■□□□ 1.44
FAM3A-209ENST00000421517 EHMT2Q96KQ7 1210 aa24.05■■□□□ 1.44
FAM3A-209ENST00000421517 CD109Q6YHK3 1445 aa24.04■■□□□ 1.44
FAM3A-209ENST00000421517 KDM6BO15054 1643 aa24.02■■□□□ 1.44
FAM3A-209ENST00000421517 TSPOAP1O95153 1857 aa24.02■■□□□ 1.44
FAM3A-209ENST00000421517 PLEKHD1A6NEE1 506 aa24.01■■□□□ 1.43
FAM3A-209ENST00000421517 KCNH8Q96L42 1107 aa24.01■■□□□ 1.43
FAM3A-209ENST00000421517 HECW1Q76N89 1606 aa24.01■■□□□ 1.43
FAM3A-209ENST00000421517 ABCA9Q8IUA7 1624 aa24■■□□□ 1.43
FAM3A-209ENST00000421517 PHLDB1Q86UU1 1377 aa23.99■■□□□ 1.43
FAM3A-209ENST00000421517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.98■■□□□ 1.43
FAM3A-209ENST00000421517 HNRNPUL2Q1KMD3 747 aaKnown RBP23.98■■□□□ 1.43
FAM3A-209ENST00000421517 CLIP1P30622 1438 aa23.98■■□□□ 1.43
FAM3A-209ENST00000421517 ARID3CA6NKF2 412 aa23.95■■□□□ 1.42
FAM3A-209ENST00000421517 CASKIN1Q8WXD9 1431 aa23.94■■□□□ 1.42
FAM3A-209ENST00000421517 CDK11AQ9UQ88 783 aaPredicted RBP23.94■■□□□ 1.42
FAM3A-209ENST00000421517 CCDC18Q5T9S5 1454 aa23.89■■□□□ 1.42
FAM3A-209ENST00000421517 FYCO1Q9BQS8 1478 aa23.88■■□□□ 1.41
FAM3A-209ENST00000421517 CDK13Q14004 1512 aaKnown RBP23.88■■□□□ 1.41
FAM3A-209ENST00000421517 ARAP3Q8WWN8 1544 aa23.88■■□□□ 1.41
FAM3A-209ENST00000421517 NEO1Q92859 1461 aa23.87■■□□□ 1.41
FAM3A-209ENST00000421517 COL17A1Q9UMD9 1497 aaPredicted RBP23.87■■□□□ 1.41
FAM3A-209ENST00000421517 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.84■■□□□ 1.41
FAM3A-209ENST00000421517 TROQ12816 1431 aaPredicted RBP23.82■■□□□ 1.4
FAM3A-209ENST00000421517 CEP162Q5TB80 1403 aa23.82■■□□□ 1.4
FAM3A-209ENST00000421517 PCF11O94913 1555 aaKnown RBP23.82■■□□□ 1.4
FAM3A-209ENST00000421517 ATP1B4Q9UN42 357 aaPredicted RBP23.81■■□□□ 1.4
FAM3A-209ENST00000421517 PLCH2O75038 1416 aa23.76■■□□□ 1.39
FAM3A-209ENST00000421517 LRRIQ1Q96JM4 1722 aa23.76■■□□□ 1.39
FAM3A-209ENST00000421517 CFAP74Q9C0B2 1584 aa23.76■■□□□ 1.39
FAM3A-209ENST00000421517 TTC37Q6PGP7 1564 aa23.74■■□□□ 1.39
FAM3A-209ENST00000421517 KIF14Q15058 1648 aa23.74■■□□□ 1.39
FAM3A-209ENST00000421517 FANCAO15360 1455 aa23.72■■□□□ 1.39
FAM3A-209ENST00000421517 AKNAQ7Z591 1439 aa23.69■■□□□ 1.38
FAM3A-209ENST00000421517 LOC105371045A0A1W2PR82 267 aa23.68■■□□□ 1.38
FAM3A-209ENST00000421517 EFCAB2Q5VUJ9 269 aa23.65■■□□□ 1.38
FAM3A-209ENST00000421517 DENND4BO75064 1496 aaPredicted RBP23.64■■□□□ 1.38
FAM3A-209ENST00000421517 MYO5CQ9NQX4 1742 aa23.64■■□□□ 1.37
FAM3A-209ENST00000421517 VPS8Q8N3P4 1428 aa23.6■■□□□ 1.37
FAM3A-209ENST00000421517 FRMPD1Q5SYB0 1578 aa23.59■■□□□ 1.37
FAM3A-209ENST00000421517 MAGI2Q86UL8 1455 aa23.58■■□□□ 1.37
FAM3A-209ENST00000421517 RAPGEF3O95398 923 aa23.58■■□□□ 1.37
FAM3A-209ENST00000421517 ADGRL1O94910 1474 aa23.57■■□□□ 1.36
FAM3A-209ENST00000421517 ZMYM4Q5VZL5 1548 aa23.57■■□□□ 1.36
FAM3A-209ENST00000421517 RICTORQ6R327 1708 aa23.56■■□□□ 1.36
FAM3A-209ENST00000421517 AEBP2Q6ZN18 517 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms