RNA–Protein interactions for RNA: ENST00000420394.5

SSUH2-205, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 1 (best)

Gene SSUH2, Length 1,634 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-205ENST00000420394 ERCC6Q03468 1493 aa31.09■■■□□ 2.57
SSUH2-205ENST00000420394 PBRM1Q86U86 1689 aa31.07■■■□□ 2.56
SSUH2-205ENST00000420394 GRIN2BQ13224 1484 aa31.04■■■□□ 2.56
SSUH2-205ENST00000420394 THOC2Q8NI27 1593 aaKnown RBP30.98■■■□□ 2.55
SSUH2-205ENST00000420394 ADAMTS12P58397 1594 aa30.98■■■□□ 2.55
SSUH2-205ENST00000420394 AQRO60306 1485 aaKnown RBP eCLIP30.97■■■□□ 2.551e-6■■■■□ 21.5
SSUH2-205ENST00000420394 TIAM1Q13009 1591 aa30.92■■■□□ 2.54
SSUH2-205ENST00000420394 SAMD9Q5K651 1589 aa30.91■■■□□ 2.54
SSUH2-205ENST00000420394 FMN1Q68DA7 1419 aa30.9■■■□□ 2.54
SSUH2-205ENST00000420394 FYCO1Q9BQS8 1478 aa30.9■■■□□ 2.54
SSUH2-205ENST00000420394 CASKIN1Q8WXD9 1431 aa30.86■■■□□ 2.53
SSUH2-205ENST00000420394 FHOD3Q2V2M9 1422 aa30.85■■■□□ 2.53
SSUH2-205ENST00000420394 PCF11O94913 1555 aaKnown RBP30.84■■■□□ 2.53
SSUH2-205ENST00000420394 CFAP43Q8NDM7 1665 aa30.84■■■□□ 2.53
SSUH2-205ENST00000420394 KANK4Q5T7N3 995 aaPredicted RBP30.84■■■□□ 2.53
SSUH2-205ENST00000420394 RRBP1Q9P2E9 1410 aaKnown RBP30.83■■■□□ 2.53
SSUH2-205ENST00000420394 ZNF608Q9ULD9 1512 aaPredicted RBP30.82■■■□□ 2.52
SSUH2-205ENST00000420394 CCER1Q8TC90 406 aaPredicted RBP30.81■■■□□ 2.52
SSUH2-205ENST00000420394 EIF4G3O43432 1585 aaKnown RBP30.8■■■□□ 2.52
SSUH2-205ENST00000420394 LRRC9Q6ZRR7 1453 aa30.77■■■□□ 2.52
SSUH2-205ENST00000420394 IQGAP2Q13576 1575 aa30.76■■■□□ 2.51
SSUH2-205ENST00000420394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.75■■■□□ 2.51
SSUH2-205ENST00000420394 MAGI1Q96QZ7 1491 aaPredicted RBP30.74■■■□□ 2.51
SSUH2-205ENST00000420394 P3H3Q8IVL6 736 aa30.71■■■□□ 2.51
SSUH2-205ENST00000420394 SNAPC4Q5SXM2 1469 aa30.7■■■□□ 2.51
SSUH2-205ENST00000420394 CCNB3Q8WWL7 1395 aa30.67■■■□□ 2.5
SSUH2-205ENST00000420394 UGGT2Q9NYU1 1516 aa30.65■■■□□ 2.5
SSUH2-205ENST00000420394 HNRNPUL2Q1KMD3 747 aaKnown RBP30.64■■■□□ 2.5
SSUH2-205ENST00000420394 GRIN2AQ12879 1464 aa30.64■■■□□ 2.49
SSUH2-205ENST00000420394 KIAA0586Q9BVV6 1533 aa30.63■■■□□ 2.49
SSUH2-205ENST00000420394 SYNJ2O15056 1496 aa30.59■■■□□ 2.49
SSUH2-205ENST00000420394 CCDC18Q5T9S5 1454 aa30.53■■■□□ 2.48
SSUH2-205ENST00000420394 ATP1B4Q9UN42 357 aaPredicted RBP30.51■■■□□ 2.48
SSUH2-205ENST00000420394 HECW1Q76N89 1606 aa30.49■■■□□ 2.47
SSUH2-205ENST00000420394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.47■■■□□ 2.47
SSUH2-205ENST00000420394 PHLDB1Q86UU1 1377 aa30.46■■■□□ 2.47
SSUH2-205ENST00000420394 CHMP7Q8WUX9 453 aaPredicted RBP30.44■■■□□ 2.46
SSUH2-205ENST00000420394 EHBP1L1Q8N3D4 1523 aa30.43■■■□□ 2.46
SSUH2-205ENST00000420394 KIAA0556O60303 1618 aa30.43■■■□□ 2.46
SSUH2-205ENST00000420394 MTUS2Q5JR59 1369 aa30.43■■■□□ 2.46
SSUH2-205ENST00000420394 CLSPNQ9HAW4 1339 aa30.42■■■□□ 2.46
SSUH2-205ENST00000420394 NUP160Q12769 1436 aa30.41■■■□□ 2.46
SSUH2-205ENST00000420394 DISP1Q96F81 1524 aa30.38■■■□□ 2.45
SSUH2-205ENST00000420394 CEP170Q5SW79 1584 aa30.37■■■□□ 2.45
SSUH2-205ENST00000420394 LRRIQ1Q96JM4 1722 aa30.37■■■□□ 2.45
SSUH2-205ENST00000420394 SUPT6HQ7KZ85 1726 aaKnown RBP30.33■■■□□ 2.45
SSUH2-205ENST00000420394 EPRSP07814 1512 aaKnown RBP30.31■■■□□ 2.44
SSUH2-205ENST00000420394 FGD6Q6ZV73 1430 aa30.28■■■□□ 2.44
SSUH2-205ENST00000420394 CARMIL2Q6F5E8 1435 aa30.27■■■□□ 2.44
SSUH2-205ENST00000420394 NCOA2Q15596 1464 aa30.26■■■□□ 2.44
SSUH2-205ENST00000420394 ARHGEF11O15085 1522 aa30.25■■■□□ 2.43
SSUH2-205ENST00000420394 MYOM3Q5VTT5 1437 aa30.23■■■□□ 2.43
SSUH2-205ENST00000420394 DHX57Q6P158 1386 aaKnown RBP30.22■■■□□ 2.43
SSUH2-205ENST00000420394 RAPGEF6Q8TEU7 1601 aa30.2■■■□□ 2.43
SSUH2-205ENST00000420394 FBLN2P98095 1184 aa30.2■■■□□ 2.43
SSUH2-205ENST00000420394 FAM50AQ14320 339 aaKnown RBP30.2■■■□□ 2.43
SSUH2-205ENST00000420394 SETD5Q9C0A6 1442 aa30.17■■■□□ 2.42
SSUH2-205ENST00000420394 MAGI3Q5TCQ9 1506 aa30.15■■■□□ 2.42
SSUH2-205ENST00000420394 JPH4Q96JJ6 628 aa30.14■■■□□ 2.42
SSUH2-205ENST00000420394 ITGAEP38570 1179 aa30.12■■■□□ 2.41
SSUH2-205ENST00000420394 NUP153P49790 1475 aaKnown RBP30.12■■■□□ 2.41
SSUH2-205ENST00000420394 RAB3GAP2Q9H2M9 1393 aa30.11■■■□□ 2.41
SSUH2-205ENST00000420394 CDK13Q14004 1512 aaKnown RBP30.11■■■□□ 2.41
SSUH2-205ENST00000420394 CDK11AQ9UQ88 783 aaPredicted RBP30.1■■■□□ 2.41
SSUH2-205ENST00000420394 MIA2Q96PC5 1412 aa30.08■■■□□ 2.41
SSUH2-205ENST00000420394 TCOF1Q13428 1488 aaKnown RBP30.07■■■□□ 2.4
SSUH2-205ENST00000420394 PTPN23Q9H3S7 1636 aa30.04■■■□□ 2.4
SSUH2-205ENST00000420394 CHD1O14646 1710 aa29.98■■■□□ 2.39
SSUH2-205ENST00000420394 HFM1A2PYH4 1435 aa29.96■■■□□ 2.39
SSUH2-205ENST00000420394 ABCA8O94911 1581 aa29.95■■■□□ 2.39
SSUH2-205ENST00000420394 PLB1Q6P1J6 1458 aa29.94■■■□□ 2.38
SSUH2-205ENST00000420394 TROQ12816 1431 aaPredicted RBP29.94■■■□□ 2.38
SSUH2-205ENST00000420394 SHROOM2Q13796 1616 aa29.91■■■□□ 2.38
SSUH2-205ENST00000420394 AKNAQ7Z591 1439 aa29.91■■■□□ 2.38
SSUH2-205ENST00000420394 PRG4Q92954 1404 aaPredicted RBP29.91■■■□□ 2.38
SSUH2-205ENST00000420394 ADCY10Q96PN6 1610 aa29.88■■■□□ 2.37
SSUH2-205ENST00000420394 PTPRKQ15262 1439 aa29.84■■■□□ 2.37
SSUH2-205ENST00000420394 MAPKBP1O60336 1514 aa29.84■■■□□ 2.37
SSUH2-205ENST00000420394 ZNF316A6NFI3 1004 aaPredicted RBP29.83■■■□□ 2.37
SSUH2-205ENST00000420394 ACIN1Q9UKV3 1341 aaKnown RBP29.83■■■□□ 2.37
SSUH2-205ENST00000420394 PTPRGP23470 1445 aa29.82■■■□□ 2.36
SSUH2-205ENST00000420394 ITSN2Q9NZM3 1697 aa29.81■■■□□ 2.36
SSUH2-205ENST00000420394 NAIPQ13075 1403 aa29.8■■■□□ 2.36
SSUH2-205ENST00000420394 ARID3CA6NKF2 412 aa29.79■■■□□ 2.36
SSUH2-205ENST00000420394 UACAQ9BZF9 1416 aa29.76■■■□□ 2.35
SSUH2-205ENST00000420394 GCC2Q8IWJ2 1684 aa29.75■■■□□ 2.35
SSUH2-205ENST00000420394 ATP10BO94823 1461 aa29.74■■■□□ 2.35
SSUH2-205ENST00000420394 TIMELESSQ9UNS1 1208 aa29.74■■■□□ 2.35
SSUH2-205ENST00000420394 PLEKHD1A6NEE1 506 aa29.72■■■□□ 2.35
SSUH2-205ENST00000420394 ROCK1Q13464 1354 aa29.72■■■□□ 2.35
SSUH2-205ENST00000420394 CLASP1Q7Z460 1538 aa29.72■■■□□ 2.35
SSUH2-205ENST00000420394 DNMT1P26358 1616 aaKnown RBP29.71■■■□□ 2.35
SSUH2-205ENST00000420394 KIF14Q15058 1648 aa29.71■■■□□ 2.35
SSUH2-205ENST00000420394 DAPK1P53355 1430 aa29.67■■■□□ 2.34
SSUH2-205ENST00000420394 GPATCH8Q9UKJ3 1502 aaKnown RBP29.67■■■□□ 2.34
SSUH2-205ENST00000420394 DIEXFQ68CQ4 756 aaKnown RBP29.66■■■□□ 2.34
SSUH2-205ENST00000420394 CAMSAP2Q08AD1 1489 aa29.61■■■□□ 2.33
SSUH2-205ENST00000420394 ABCC10Q5T3U5 1492 aa29.61■■■□□ 2.33
SSUH2-205ENST00000420394 CFDP1Q9UEE9 299 aaPredicted RBP29.61■■■□□ 2.33
SSUH2-205ENST00000420394 ABCC5O15440 1437 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms