RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 MTUS2Q5JR59 1369 aa20.24■□□□□ 0.83
CCT6P3-201ENST00000419314 CCNB3Q8WWL7 1395 aa20.23■□□□□ 0.83
CCT6P3-201ENST00000419314 FHAD1B1AJZ9 1412 aa20.23■□□□□ 0.83
CCT6P3-201ENST00000419314 AQRO60306 1485 aaKnown RBP eCLIP20.23■□□□□ 0.838e-8■■■□□ 16
CCT6P3-201ENST00000419314 ZNF316A6NFI3 1004 aaPredicted RBP20.23■□□□□ 0.83
CCT6P3-201ENST00000419314 LAMC3Q9Y6N6 1575 aa20.22■□□□□ 0.83
CCT6P3-201ENST00000419314 YTHDC1Q96MU7 727 aaKnown RBP20.22■□□□□ 0.83
CCT6P3-201ENST00000419314 ABCA10Q8WWZ4 1543 aa20.19■□□□□ 0.82
CCT6P3-201ENST00000419314 CHIC2Q9UKJ5 165 aa20.14■□□□□ 0.81
CCT6P3-201ENST00000419314 TRIM52Q96A61 297 aa20.09■□□□□ 0.81
CCT6P3-201ENST00000419314 PRDM2Q13029 1718 aa20.07■□□□□ 0.8
CCT6P3-201ENST00000419314 FMN1Q68DA7 1419 aa20.06■□□□□ 0.8
CCT6P3-201ENST00000419314 MRC2Q9UBG0 1479 aa20.04■□□□□ 0.8
CCT6P3-201ENST00000419314 ZNF777Q9ULD5 760 aaPredicted RBP20.04■□□□□ 0.8
CCT6P3-201ENST00000419314 PHLDB1Q86UU1 1377 aa20.03■□□□□ 0.8
CCT6P3-201ENST00000419314 RRP7BPQ9NSQ0 103 aa20.02■□□□□ 0.79
CCT6P3-201ENST00000419314 CENPBP07199 599 aaPredicted RBP20■□□□□ 0.79
CCT6P3-201ENST00000419314 SIN3AQ96ST3 1273 aa19.99■□□□□ 0.79
CCT6P3-201ENST00000419314 CDK11AQ9UQ88 783 aaPredicted RBP19.99■□□□□ 0.79
CCT6P3-201ENST00000419314 LRRC9Q6ZRR7 1453 aa19.98■□□□□ 0.79
CCT6P3-201ENST00000419314 RAB3GAP2Q9H2M9 1393 aa19.98■□□□□ 0.79
CCT6P3-201ENST00000419314 KIF21AQ7Z4S6 1674 aa19.96■□□□□ 0.79
CCT6P3-201ENST00000419314 DHX57Q6P158 1386 aaKnown RBP19.95■□□□□ 0.78
CCT6P3-201ENST00000419314 ZNF608Q9ULD9 1512 aaPredicted RBP19.95■□□□□ 0.78
CCT6P3-201ENST00000419314 GRIN2BQ13224 1484 aa19.93■□□□□ 0.78
CCT6P3-201ENST00000419314 RRBP1Q9P2E9 1410 aaKnown RBP19.92■□□□□ 0.78
CCT6P3-201ENST00000419314 CASKIN1Q8WXD9 1431 aa19.91■□□□□ 0.78
CCT6P3-201ENST00000419314 SETD5Q9C0A6 1442 aa19.91■□□□□ 0.78
CCT6P3-201ENST00000419314 TIAM1Q13009 1591 aa19.9■□□□□ 0.78
CCT6P3-201ENST00000419314 MIER1Q8N108 512 aa19.88■□□□□ 0.77
CCT6P3-201ENST00000419314 CUL7Q14999 1698 aa19.88■□□□□ 0.77
CCT6P3-201ENST00000419314 JPH4Q96JJ6 628 aa19.87■□□□□ 0.77
CCT6P3-201ENST00000419314 PCF11O94913 1555 aaKnown RBP19.87■□□□□ 0.77
CCT6P3-201ENST00000419314 HIRIP3Q9BW71 556 aaPredicted RBP19.87■□□□□ 0.77
CCT6P3-201ENST00000419314 IFT140Q96RY7 1462 aa19.86■□□□□ 0.77
CCT6P3-201ENST00000419314 CLSPNQ9HAW4 1339 aa19.86■□□□□ 0.77
CCT6P3-201ENST00000419314 EFCAB5A4FU69 1503 aa19.84■□□□□ 0.77
CCT6P3-201ENST00000419314 FYCO1Q9BQS8 1478 aa19.84■□□□□ 0.77
CCT6P3-201ENST00000419314 SNAPC4Q5SXM2 1469 aa19.83■□□□□ 0.76
CCT6P3-201ENST00000419314 PLEKHD1A6NEE1 506 aa19.79■□□□□ 0.76
CCT6P3-201ENST00000419314 CFDP1Q9UEE9 299 aaPredicted RBP19.79■□□□□ 0.76
CCT6P3-201ENST00000419314 TONSLQ96HA7 1378 aa19.77■□□□□ 0.75
CCT6P3-201ENST00000419314 FGD6Q6ZV73 1430 aa19.76■□□□□ 0.75
CCT6P3-201ENST00000419314 ABCA5Q8WWZ7 1642 aa19.73■□□□□ 0.75
CCT6P3-201ENST00000419314 NCOA2Q15596 1464 aa19.73■□□□□ 0.75
CCT6P3-201ENST00000419314 DDX10Q13206 875 aaKnown RBP19.72■□□□□ 0.75
CCT6P3-201ENST00000419314 KCNH8Q96L42 1107 aa19.72■□□□□ 0.75
CCT6P3-201ENST00000419314 CARMIL2Q6F5E8 1435 aa19.71■□□□□ 0.75
CCT6P3-201ENST00000419314 ZNF644Q9H582 1327 aaPredicted RBP19.7■□□□□ 0.74
CCT6P3-201ENST00000419314 ACIN1Q9UKV3 1341 aaKnown RBP19.7■□□□□ 0.74
CCT6P3-201ENST00000419314 MAP3K1Q13233 1512 aa19.7■□□□□ 0.74
CCT6P3-201ENST00000419314 TARBP1Q13395 1621 aaKnown RBP19.7■□□□□ 0.74
CCT6P3-201ENST00000419314 IQGAP2Q13576 1575 aa19.7■□□□□ 0.74
CCT6P3-201ENST00000419314 FOXD1Q16676 465 aa19.69■□□□□ 0.74
CCT6P3-201ENST00000419314 MYT1LQ9UL68 1186 aa19.69■□□□□ 0.74
CCT6P3-201ENST00000419314 ZNF326Q5BKZ1 582 aaKnown RBP19.69■□□□□ 0.74
CCT6P3-201ENST00000419314 MYOM3Q5VTT5 1437 aa19.68■□□□□ 0.74
CCT6P3-201ENST00000419314 CTTNBP2Q8WZ74 1663 aa19.67■□□□□ 0.74
CCT6P3-201ENST00000419314 CDK13Q14004 1512 aaKnown RBP19.66■□□□□ 0.74
CCT6P3-201ENST00000419314 POLR3GLQ9BT43 218 aa19.66■□□□□ 0.74
CCT6P3-201ENST00000419314 KIAA0586Q9BVV6 1533 aa19.65■□□□□ 0.74
CCT6P3-201ENST00000419314 CNGB1Q14028 1251 aaPredicted RBP19.65■□□□□ 0.74
CCT6P3-201ENST00000419314 SLC4A1APQ9BWU0 796 aaKnown RBP19.65■□□□□ 0.74
CCT6P3-201ENST00000419314 GRIN2AQ12879 1464 aa19.64■□□□□ 0.74
CCT6P3-201ENST00000419314 GTF3C3Q9Y5Q9 886 aa19.64■□□□□ 0.73
CCT6P3-201ENST00000419314 TSPY4P0CV99 314 aa19.62■□□□□ 0.73
CCT6P3-201ENST00000419314 TSPY10P0CW01 314 aa19.62■□□□□ 0.73
CCT6P3-201ENST00000419314 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
CCT6P3-201ENST00000419314 CCDC18Q5T9S5 1454 aa19.61■□□□□ 0.73
CCT6P3-201ENST00000419314 EPRSP07814 1512 aaKnown RBP19.6■□□□□ 0.73
CCT6P3-201ENST00000419314 ADAMTS12P58397 1594 aa19.6■□□□□ 0.73
CCT6P3-201ENST00000419314 WDR62O43379 1518 aa19.59■□□□□ 0.73
CCT6P3-201ENST00000419314 WDR97A6NE52 1622 aa19.57■□□□□ 0.72
CCT6P3-201ENST00000419314 SYNJ2O15056 1496 aa19.56■□□□□ 0.72
CCT6P3-201ENST00000419314 PBRM1Q86U86 1689 aa19.55■□□□□ 0.72
CCT6P3-201ENST00000419314 PRG4Q92954 1404 aaPredicted RBP19.55■□□□□ 0.72
CCT6P3-201ENST00000419314 PPP1R15AO75807 674 aaPredicted RBP19.55■□□□□ 0.72
CCT6P3-201ENST00000419314 MPHOSPH9Q99550 1183 aa19.55■□□□□ 0.72
CCT6P3-201ENST00000419314 PTPRGP23470 1445 aa19.54■□□□□ 0.72
CCT6P3-201ENST00000419314 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.54■□□□□ 0.72
CCT6P3-201ENST00000419314 PLB1Q6P1J6 1458 aa19.54■□□□□ 0.72
CCT6P3-201ENST00000419314 EHBP1L1Q8N3D4 1523 aa19.53■□□□□ 0.72
CCT6P3-201ENST00000419314 MAGI1Q96QZ7 1491 aaPredicted RBP19.53■□□□□ 0.72
CCT6P3-201ENST00000419314 PTPRKQ15262 1439 aa19.53■□□□□ 0.72
CCT6P3-201ENST00000419314 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
CCT6P3-201ENST00000419314 HNRNPMP52272 730 aaKnown RBP eCLIP19.51■□□□□ 0.712e-6■■■■□ 20.1
CCT6P3-201ENST00000419314 HECW1Q76N89 1606 aa19.51■□□□□ 0.71
CCT6P3-201ENST00000419314 CFAP43Q8NDM7 1665 aa19.49■□□□□ 0.71
CCT6P3-201ENST00000419314 SAMD9Q5K651 1589 aa19.49■□□□□ 0.71
CCT6P3-201ENST00000419314 ANP32CO43423 234 aa19.48■□□□□ 0.71
CCT6P3-201ENST00000419314 SUPT6HQ7KZ85 1726 aaKnown RBP19.47■□□□□ 0.71
CCT6P3-201ENST00000419314 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.47■□□□□ 0.712e-14■■■■■ 29.6
CCT6P3-201ENST00000419314 TIMELESSQ9UNS1 1208 aa19.47■□□□□ 0.71
CCT6P3-201ENST00000419314 THOC2Q8NI27 1593 aaKnown RBP19.46■□□□□ 0.71
CCT6P3-201ENST00000419314 NAIPQ13075 1403 aa19.45■□□□□ 0.7
CCT6P3-201ENST00000419314 HFM1A2PYH4 1435 aa19.44■□□□□ 0.7
CCT6P3-201ENST00000419314 KDM2AQ9Y2K7 1162 aa19.44■□□□□ 0.7
CCT6P3-201ENST00000419314 DISP1Q96F81 1524 aa19.43■□□□□ 0.7
CCT6P3-201ENST00000419314 UACAQ9BZF9 1416 aa19.43■□□□□ 0.7
CCT6P3-201ENST00000419314 UGGT2Q9NYU1 1516 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms