RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 RIMBP3BA6NNM3 1639 aa29.12■■■□□ 2.25
COMMD3-BMI1-201ENST00000417470 RIMBP3Q9UFD9 1639 aa29.12■■■□□ 2.25
COMMD3-BMI1-201ENST00000417470 JPH4Q96JJ6 628 aa29.11■■■□□ 2.25
COMMD3-BMI1-201ENST00000417470 SHROOM2Q13796 1616 aa29.11■■■□□ 2.25
COMMD3-BMI1-201ENST00000417470 FAM9AQ8IZU1 332 aaPredicted RBP29.09■■■□□ 2.25
COMMD3-BMI1-201ENST00000417470 PRG4Q92954 1404 aaPredicted RBP28.98■■■□□ 2.23
COMMD3-BMI1-201ENST00000417470 IQGAP2Q13576 1575 aa28.97■■■□□ 2.23
COMMD3-BMI1-201ENST00000417470 KIF21BO75037 1637 aa28.97■■■□□ 2.23
COMMD3-BMI1-201ENST00000417470 ARAP1Q96P48 1450 aa28.95■■■□□ 2.22
COMMD3-BMI1-201ENST00000417470 ERCC6L2Q5T890 1561 aa28.92■■■□□ 2.22
COMMD3-BMI1-201ENST00000417470 CYB5RLQ6IPT4 315 aa28.89■■■□□ 2.22
COMMD3-BMI1-201ENST00000417470 CTTNBP2Q8WZ74 1663 aa28.88■■■□□ 2.21
COMMD3-BMI1-201ENST00000417470 UGGT2Q9NYU1 1516 aa28.88■■■□□ 2.21
COMMD3-BMI1-201ENST00000417470 CARMIL2Q6F5E8 1435 aa28.84■■■□□ 2.21
COMMD3-BMI1-201ENST00000417470 GOLGA3Q08378 1498 aa28.82■■■□□ 2.2
COMMD3-BMI1-201ENST00000417470 DISP1Q96F81 1524 aa28.79■■■□□ 2.2
COMMD3-BMI1-201ENST00000417470 TNIKQ9UKE5 1360 aa28.75■■■□□ 2.19
COMMD3-BMI1-201ENST00000417470 UBTFP17480 764 aaKnown RBP28.71■■■□□ 2.19
COMMD3-BMI1-201ENST00000417470 KIAA0556O60303 1618 aa28.69■■■□□ 2.18
COMMD3-BMI1-201ENST00000417470 PTPRGP23470 1445 aa28.69■■■□□ 2.18
COMMD3-BMI1-201ENST00000417470 EHMT2Q96KQ7 1210 aa28.6■■■□□ 2.17
COMMD3-BMI1-201ENST00000417470 SAMD9Q5K651 1589 aa28.59■■■□□ 2.17
COMMD3-BMI1-201ENST00000417470 EFCAB5A4FU69 1503 aa28.53■■■□□ 2.16
COMMD3-BMI1-201ENST00000417470 UHRF1BP1LA0JNW5 1464 aa28.51■■■□□ 2.15
COMMD3-BMI1-201ENST00000417470 UACAQ9BZF9 1416 aa28.51■■■□□ 2.15
COMMD3-BMI1-201ENST00000417470 P3H3Q8IVL6 736 aa28.48■■■□□ 2.15
COMMD3-BMI1-201ENST00000417470 TTBK1Q5TCY1 1321 aaPredicted RBP28.47■■■□□ 2.15
COMMD3-BMI1-201ENST00000417470 ADCY10Q96PN6 1610 aa28.47■■■□□ 2.15
COMMD3-BMI1-201ENST00000417470 RANGAP1P46060 587 aaPredicted RBP28.46■■■□□ 2.15
COMMD3-BMI1-201ENST00000417470 NPM1P06748 294 aaKnown RBP eCLIP28.43■■■□□ 2.14
COMMD3-BMI1-201ENST00000417470 ABCC2Q92887 1545 aa28.43■■■□□ 2.14
COMMD3-BMI1-201ENST00000417470 ARHGAP35Q9NRY4 1499 aa28.41■■■□□ 2.14
COMMD3-BMI1-201ENST00000417470 FHOD3Q2V2M9 1422 aa28.4■■■□□ 2.14
COMMD3-BMI1-201ENST00000417470 ABCA8O94911 1581 aa28.4■■■□□ 2.14
COMMD3-BMI1-201ENST00000417470 PLB1Q6P1J6 1458 aa28.39■■■□□ 2.13
COMMD3-BMI1-201ENST00000417470 KDM5BQ9UGL1 1544 aa28.35■■■□□ 2.13
COMMD3-BMI1-201ENST00000417470 LOC105371045A0A1W2PR82 267 aa28.35■■■□□ 2.13
COMMD3-BMI1-201ENST00000417470 MAPKBP1O60336 1514 aa28.32■■■□□ 2.12
COMMD3-BMI1-201ENST00000417470 CLIP1P30622 1438 aa28.3■■■□□ 2.12
COMMD3-BMI1-201ENST00000417470 FMN1Q68DA7 1419 aa28.29■■■□□ 2.12
COMMD3-BMI1-201ENST00000417470 RAPGEF6Q8TEU7 1601 aa28.25■■■□□ 2.11
COMMD3-BMI1-201ENST00000417470 CEP162Q5TB80 1403 aa28.22■■■□□ 2.11
COMMD3-BMI1-201ENST00000417470 ZCCHC11Q5TAX3 1644 aaKnown RBP28.19■■■□□ 2.1
COMMD3-BMI1-201ENST00000417470 TRHP20396 242 aaPredicted RBP28.19■■■□□ 2.1
COMMD3-BMI1-201ENST00000417470 ATP10BO94823 1461 aa28.18■■■□□ 2.1
COMMD3-BMI1-201ENST00000417470 NUP153P49790 1475 aaKnown RBP28.18■■■□□ 2.1
COMMD3-BMI1-201ENST00000417470 ASXL2Q76L83 1435 aa28.18■■■□□ 2.1
COMMD3-BMI1-201ENST00000417470 ABCC10Q5T3U5 1492 aa28.16■■■□□ 2.1
COMMD3-BMI1-201ENST00000417470 CASKIN1Q8WXD9 1431 aa28.09■■■□□ 2.09
COMMD3-BMI1-201ENST00000417470 WDR7Q9Y4E6 1490 aa28.08■■■□□ 2.09
COMMD3-BMI1-201ENST00000417470 DIP2BQ9P265 1576 aa28.07■■■□□ 2.08
COMMD3-BMI1-201ENST00000417470 FAM69CQ0P6D2 419 aa28.06■■■□□ 2.08
COMMD3-BMI1-201ENST00000417470 HECW1Q76N89 1606 aa28.05■■■□□ 2.08
COMMD3-BMI1-201ENST00000417470 ARID3CA6NKF2 412 aa28.04■■■□□ 2.08
COMMD3-BMI1-201ENST00000417470 GLI2P10070 1586 aa28.03■■■□□ 2.08
COMMD3-BMI1-201ENST00000417470 EPRSP07814 1512 aaKnown RBP28.02■■■□□ 2.08
COMMD3-BMI1-201ENST00000417470 KIF13AQ9H1H9 1805 aa28.02■■■□□ 2.08
COMMD3-BMI1-201ENST00000417470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.01■■■□□ 2.07
COMMD3-BMI1-201ENST00000417470 HNRNPUL2Q1KMD3 747 aaKnown RBP28.01■■■□□ 2.07
COMMD3-BMI1-201ENST00000417470 FYCO1Q9BQS8 1478 aa28.01■■■□□ 2.07
COMMD3-BMI1-201ENST00000417470 PLEKHD1A6NEE1 506 aa27.98■■■□□ 2.07
COMMD3-BMI1-201ENST00000417470 ATP1B4Q9UN42 357 aaPredicted RBP27.98■■■□□ 2.07
COMMD3-BMI1-201ENST00000417470 PCF11O94913 1555 aaKnown RBP27.97■■■□□ 2.07
COMMD3-BMI1-201ENST00000417470 CDK13Q14004 1512 aaKnown RBP27.94■■■□□ 2.06
COMMD3-BMI1-201ENST00000417470 CCDC18Q5T9S5 1454 aa27.94■■■□□ 2.06
COMMD3-BMI1-201ENST00000417470 CDK11AQ9UQ88 783 aaPredicted RBP27.93■■■□□ 2.06
COMMD3-BMI1-201ENST00000417470 KCNH8Q96L42 1107 aa27.92■■■□□ 2.06
COMMD3-BMI1-201ENST00000417470 VPS8Q8N3P4 1428 aa27.9■■■□□ 2.06
COMMD3-BMI1-201ENST00000417470 LRRIQ1Q96JM4 1722 aa27.87■■■□□ 2.05
COMMD3-BMI1-201ENST00000417470 MAP3K4Q9Y6R4 1608 aa27.85■■■□□ 2.05
COMMD3-BMI1-201ENST00000417470 TROQ12816 1431 aaPredicted RBP27.82■■■□□ 2.04
COMMD3-BMI1-201ENST00000417470 CD109Q6YHK3 1445 aa27.81■■■□□ 2.04
COMMD3-BMI1-201ENST00000417470 CFAP43Q8NDM7 1665 aa27.81■■■□□ 2.04
COMMD3-BMI1-201ENST00000417470 ABCA9Q8IUA7 1624 aa27.8■■■□□ 2.04
COMMD3-BMI1-201ENST00000417470 MAGI3Q5TCQ9 1506 aa27.78■■■□□ 2.04
COMMD3-BMI1-201ENST00000417470 TEX14Q8IWB6 1497 aa27.74■■■□□ 2.03
COMMD3-BMI1-201ENST00000417470 PPRC1Q5VV67 1664 aaKnown RBP27.74■■■□□ 2.03
COMMD3-BMI1-201ENST00000417470 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.72■■■□□ 2.031e-7■□□□□ 9.5
COMMD3-BMI1-201ENST00000417470 TSPOAP1O95153 1857 aa27.71■■■□□ 2.03
COMMD3-BMI1-201ENST00000417470 MAP3K1Q13233 1512 aa27.7■■■□□ 2.02
COMMD3-BMI1-201ENST00000417470 KIF14Q15058 1648 aa27.67■■■□□ 2.02
COMMD3-BMI1-201ENST00000417470 PHLDB1Q86UU1 1377 aa27.65■■■□□ 2.02
COMMD3-BMI1-201ENST00000417470 MTUS2Q5JR59 1369 aa27.64■■■□□ 2.02
COMMD3-BMI1-201ENST00000417470 TIAM1Q13009 1591 aa27.64■■■□□ 2.01
COMMD3-BMI1-201ENST00000417470 TTC37Q6PGP7 1564 aa27.63■■■□□ 2.01
COMMD3-BMI1-201ENST00000417470 PLCH2O75038 1416 aa27.62■■■□□ 2.01
COMMD3-BMI1-201ENST00000417470 NEO1Q92859 1461 aa27.6■■■□□ 2.01
COMMD3-BMI1-201ENST00000417470 EHBP1L1Q8N3D4 1523 aa27.6■■■□□ 2.01
COMMD3-BMI1-201ENST00000417470 ARAP3Q8WWN8 1544 aa27.6■■■□□ 2.01
COMMD3-BMI1-201ENST00000417470 APLP2Q06481 763 aa27.56■■■□□ 2
COMMD3-BMI1-201ENST00000417470 LRRC9Q6ZRR7 1453 aa27.55■■■□□ 2
COMMD3-BMI1-201ENST00000417470 KDM6BO15054 1643 aa27.52■■■□□ 2
COMMD3-BMI1-201ENST00000417470 FANCAO15360 1455 aa27.52■■■□□ 2
COMMD3-BMI1-201ENST00000417470 EFCAB2Q5VUJ9 269 aa27.52■■■□□ 2
COMMD3-BMI1-201ENST00000417470 COL17A1Q9UMD9 1497 aaPredicted RBP27.51■■■□□ 2
COMMD3-BMI1-201ENST00000417470 MYO5CQ9NQX4 1742 aa27.5■■□□□ 1.99
COMMD3-BMI1-201ENST00000417470 CFAP74Q9C0B2 1584 aa27.49■■□□□ 1.99
COMMD3-BMI1-201ENST00000417470 KANK4Q5T7N3 995 aaPredicted RBP27.49■■□□□ 1.99
COMMD3-BMI1-201ENST00000417470 AKNAQ7Z591 1439 aa27.49■■□□□ 1.99
COMMD3-BMI1-201ENST00000417470 GPATCH8Q9UKJ3 1502 aaKnown RBP27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms